Gcaud7886.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7886.t1
Unique NameGcaud7886.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length322
Homology
BLAST of Gcaud7886.t1 vs. uniprot
Match: A0A2V3IIV0_9FLOR (Transforming growth factor-beta-induced protein ig-h3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIV0_9FLOR)

HSP 1 Score: 355 bits (911), Expect = 1.850e-119
Identity = 193/320 (60.31%), Postives = 233/320 (72.81%), Query Frame = 0
Query:    8 MAFASSQALPLRHVS---AVPVTAPLRPS---VKRPARSFRSMLRMVQKNAPVTNTDPCIGTLLTSANRFSTLLSIVAVSGISPAAISGTVFAPTNEAFSKLPAELLQMFMSDAAFARNFILRHVVPEVVPASKLTGNGFLDAAFDGPLGYTSYGGKQLKIDGAGVTSFCDQKYDKGVVHGISSVLKPPSQKWPSIEQTYSAPPASAPQKSEFATIRARGATQTATLGGRKAMGLISQRPFWMYGPPYCAAKQEEYEPISAAVPEVSSVDYQLMPPGSVVVSPDSVNASELNPVSGLSKYIGQTKRIDGGDAISDYSRLD 321
            MAFASSQALPLR +S   A P   P R +     R A S R+ + + Q NAPV +++P +   L S   FSTL ++VAV+ +  +A+SGT+FAPTN AF +L AEL+QM +  A  AR  +LRHVV E VP+SKLTGN FL +   G L YTSYGG Q+KI G  + +  D  +DKGVVH +  VLKPP+Q WPS  Q+Y AP A  P     AT RA GAT T+TLGGRKAMGL++QRPFWMYGPPYCAAKQEEYEPIS A P+VS VDYQ+MPPGSV+V+PDSVNA+ELNPVSG+SKYIGQTKR+  GD +SDYSRLD
Sbjct:    1 MAFASSQALPLRGISVTSACPAALPRRRAQGAAARTASSSRTRM-LAQSNAPVASSEPTLAQAL-SLPAFSTLRAVVAVAQLDLSAVSGTLFAPTNAAFKRLSAELVQMVLGSADVAREVLLRHVVSECVPSSKLTGNAFLSSLNGGALPYTSYGGLQIKIGGISLGAQTDISFDKGVVHALDGVLKPPAQTWPSFSQSYIAPVAK-PSPPTIATARAMGATTTSTLGGRKAMGLMTQRPFWMYGPPYCAAKQEEYEPISIAQPDVSFVDYQVMPPGSVIVTPDSVNAAELNPVSGMSKYIGQTKRLVSGDGLSDYSRLD 317          
BLAST of Gcaud7886.t1 vs. uniprot
Match: A0A291FEC1_GRIPA (LR9 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID=A0A291FEC1_GRIPA)

HSP 1 Score: 199 bits (506), Expect = 8.730e-58
Identity = 126/293 (43.00%), Postives = 166/293 (56.66%), Query Frame = 0
Query:   46 RMVQKNAPVTNTDPCIGTL----LTSANRFSTLLSIVAVSGISPAAISGTVFAPTNEAFSKLPAELLQMFMSDAAFARNFILRHVVPEVVPASK-LTGNGFLDAAFDGPLGYTSYGGKQLKIDGAGVTS-FCDQKYDKGVVHGISSVLKPPSQKWPSIEQTYSAPPASAPQKSEFATI----------RARGATQT-ATLGGRKAMGLISQRPFWMYGPPYCAAKQEEYEPISAAVPEVSSVDYQLMPPGSVVVSPDSVNASELNPVSGLSKYIGQTKRIDGGDAISDYSRLD 321
            R V  NAPV       G      L S  R+  L+ + A  G+     + TVFAPTN A S    E     ++D   ARN +LRH++P+ V  SK + G  F D+   GPL Y   G   +KI G  + +   D + D G +H I  ++  P  K       +         + + AT           RA GA    +T+GGRKAMGLI Q PFWMYGPP+ A+KQE++EPIS A P+VSSVDYQLMPPGSV+V PD V+A+++ PVSG+SK+IG+TKR+  GD +SDYSRLD
Sbjct:   74 RPVCHNAPVVTPRMTFGQTVKETLESNPRYGNLVKLAAAGGVDLEVSNCTVFAPTNGALS---GERYDELLADPVAARNVVLRHILPDQVLTSKAIKGCSFWDSLPGGPLPYEGIG-PVVKIAGVRLLNESSDDECDNGTIHVIDGIISTPLAKPTPFAGVFEPSVPMLESRDDIATAVYPPVTPDVRRAFGAASAPSTVGGRKAMGLIKQLPFWMYGPPFNASKQEDFEPISIANPDVSSVDYQLMPPGSVIVQPDEVSAAKMLPVSGMSKHIGKTKRLVEGDGLSDYSRLD 362          
BLAST of Gcaud7886.t1 vs. uniprot
Match: R7QRM9_CHOCR (FAS1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRM9_CHOCR)

HSP 1 Score: 191 bits (486), Expect = 8.350e-56
Identity = 113/267 (42.32%), Postives = 155/267 (58.05%), Query Frame = 0
Query:   65 LTSANRFSTLLSIVAVSGISPAAISGTVFAPTNEAFSKLPAELLQMFMSDAAFARNFILRHVVPEVVPASK-LTGNGFLDAAFDGPLGYTSYGGKQLKIDGAGVTSFCDQKYDKGVVHGISSVLKPPSQKWPSIEQTY--SAPPASAPQKSEFA--------TIRARGATQTATLGGRKAMGLISQRPFWMYGPPYCAAKQEEYEPISAAVPEVSSVDYQLMPPGSVVVSPDSVNASELNPVSGLSKYIGQTKRIDGGDAISDYSRL 320
            L  AN++ TL+ +   +G+     + TVFAP + AF+  P   +   ++  A A   I RH++P+ V  SK + G GF D    GPL Y   G      +   +   C+ +   G++H + +V+  P  K   + +TY  S P  +                T RA GA   +T GGRKAMGL++Q PFW YGPP+ AAKQE+YEPIS A PE +SVDYQLMPPG+V+V+PD V+A +L PVSG+SKYIG+TKR+    A SDYSRL
Sbjct:   11 LVDANKYKTLIQLAEAAGVDLDVSNCTVFAPNDAAFASTPPGFVTNLLARPAEAAAVIARHILPDRVYTSKQIRGCGFWDGVPGGPLPYEGLGAIVRVGNTRILNDSCNDECVNGIIHTVDAVISTPMHKPEGVAKTYVPSVPTFTDSTVGSLYPTGTYSRDTSRAVGACLPSTSGGRKAMGLVNQLPFWQYGPPFNAAKQEDYEPISIAQPEGASVDYQLMPPGTVIVTPDEVSADKLLPVSGMSKYIGKTKRLVEEGAQSDYSRL 277          
BLAST of Gcaud7886.t1 vs. uniprot
Match: A0A1X6NYY5_PORUM (FAS1 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYY5_PORUM)

HSP 1 Score: 186 bits (472), Expect = 4.900e-53
Identity = 123/279 (44.09%), Postives = 159/279 (56.99%), Query Frame = 0
Query:   65 LTSANRFSTLLSIVAVSGISPAAISGT--VFAPTNEAFSKLPAELLQMFMSDA--AFARNFILRHVVP-EVVPASKLTGNGFLDAAFDGPLGYTSYGGKQLKIDGAGVTSF-CDQKYDKGVVHGISSVLKPPSQK---------------WPSIEQTYSAPPASAPQKSEFATIRARGATQT-ATLGGRKAMGLISQRPFWMYGPPYCAAKQEEYEPISAAVPEVSSVDYQLMPPGSVVVSPDSVNASELNPVSGLSKYIGQTKRIDGGDAISDYSRLD 321
            L +A  F TL++  A S        G   VFAP++ AF++L    L+  ++    A  R  + RHVVP  V+   K+ G G+ D    GPL Y + GG  +++  A V     + +   G++H I SVL PPS                   SI +TY   P++  Q     + RARGA    +T  GRKAMGLI Q PFW YGPPY AA QE+YEPIS A P+V+++DYQ+ PPGSVVV PDSVN+ ELNPVSG SKYIG+TKR   G  IS YS+LD
Sbjct:   60 LKAAGVFKTLIAAAAASDAYGEGTKGNFMVFAPSDAAFARLRPGTLEALLAPGKEATLRAIVKRHVVPGNVLTLQKMKGVGYFDGVEGGPLPYEALGGV-IRVGNALVQQDRSNVECSNGIIHVIDSVLVPPSVTPAGVFAGFIAPKPALSDSIAETYYNQPSATMQ---LGSARARGAASAPSTSSGRKAMGLIKQLPFWAYGPPYNAAYQEDYEPISIAAPDVAAIDYQVFPPGSVVVVPDSVNSGELNPVSGYSKYIGKTKRNVEGAGISQYSKLD 334          
BLAST of Gcaud7886.t1 vs. uniprot
Match: A0A7S0ZBR4_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBR4_9RHOD)

HSP 1 Score: 167 bits (424), Expect = 4.430e-46
Identity = 111/292 (38.01%), Postives = 158/292 (54.11%), Query Frame = 0
Query:   33 SVKRPARSFRSMLRMVQKNAPVTNTDPCIGTLLTSANRFSTLLSIVAVSGISPAAISGTVFAPTNEAFSKLPAELLQMFMSDAAFARNFILRHVVPEV-VPASKLTGNGFLDAAFDGPLGYTSYGG--KQLKIDGAGVTSFCDQKYDKGVVHGISSVLKPPSQKWPSIEQTYSA--PPASAPQKSEFA-TIRARGATQTATLGGRKAMGLISQRPFWMYGPPYCAAKQEEYEPISAAVPEVSSVDYQLMPPGSVVVSPDSVNASELNPVSGLSKYIGQTKRIDGGDAISDYS 318
            S   P+ +  +  R V     ++   P   ++L S   F+T+L++V  + + P     T+  P++ AF++L    L+   SD +    F+    +P V    S L G+G+L  A+   + Y+S  G  K  K     +    + +   G +H + SVL P   K P +    S   P  +   K   A T R  GA++  T+ GRKAM LI Q+PFWMYGPPY AAKQEEYEPIS A  + + VDYQ +P G+V   PDSVN+ ELNPVSG+SKYIG TK++ G  AIS Y+
Sbjct:   23 STSSPSLTLSTPSRRVSSLIFMSTELPSTFSVLKSKGSFNTVLALVQKAKLPPLTSKYTLLFPSDAAFARLQPGTLEWIQSDPSRLSEFLKYMAIPNVSFKLSDLKGDGYLQPAYGESMPYSSLVGVTKFGKSKARAIPESSNIQTQSGYIHTLDSVLFPAHFKLPQLAAASSGFLPSLNVSVKRSTAETKRYVGASKNVTISGRKAMNLIEQKPFWMYGPPYNAAKQEEYEPISIAESK-AFVDYQKLPQGTVKFVPDSVNSLELNPVSGMSKYIGNTKKLTGDGAISSYA 313          
BLAST of Gcaud7886.t1 vs. uniprot
Match: A0A5J4Z027_PORPP (FAS1 domain-containing protein n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z027_PORPP)

HSP 1 Score: 157 bits (396), Expect = 8.740e-42
Identity = 97/233 (41.63%), Postives = 136/233 (58.37%), Query Frame = 0
Query:   92 VFAPTNEAFSKLPAELLQMFMSDAAFARNFILRHVVPEVVPA--SKLTGNGFLDAAFDGPLGYTSYGGKQLKIDGAGVTSFCDQKYDKGV---VHGISSVLKPPS-QKWPSIEQTYSAPPASAPQKSEFATIRARGATQTATLGGRKAMGLISQRPFWMYGPPYCAAKQEEYEPISAAVPEVSSVDYQLMPPGSVVVSPDSVNASELNPVSGLSKYIGQTKRIDGGDAISDYS 318
            VF P + AF++L  +L +  M D+    + +  H+      A    L G G+L  A+   +GY   G + +KI  A V         K +    H + + + P +  K  SIE  +S    +    +  A +R  GAT+ A +GGR+AM L+ Q+PFWMYGPPY A  Q+EYEPISAA P+ + VDYQ+  PG+V VSPDSVNA+ELNPVSG+SKYIG+T+++ G   ISD S
Sbjct:   98 VFIPNDGAFARLSPQLRKAMMEDSRLVYDMLAGHIFTSKGSAMLKDLQGAGYLQPAYGEAIGYVGTG-RVIKIGNAQVIPESSDILRKNLGFSAHTLDTFIVPKALTKKVSIEAGFSPVTPAKYVSTTKADLRYVGATKPAAVGGRRAMNLMKQQPFWMYGPPYNAVTQDEYEPISAAAPK-AFVDYQIFAPGTVKVSPDSVNANELNPVSGMSKYIGKTQKLVGDQGISDRS 328          
BLAST of Gcaud7886.t1 vs. uniprot
Match: UPI0015E13AF8 (fasciclin domain-containing protein n=2 Tax=Deinococcus TaxID=1298 RepID=UPI0015E13AF8)

HSP 1 Score: 76.6 bits (187), Expect = 2.730e-13
Identity = 56/145 (38.62%), Postives = 83/145 (57.24%), Query Frame = 0
Query:   51 NAPVTNTDPCIGTLLTSANRFSTLLSIVAVSGISPAAISG----TVFAPTNEAFSKLPAELLQMFMSDAAFARNFILRHVVPEVVPASKLTGNGFLDAAFDGPLGYTSYGGKQLKIDGAGVTSFCDQKYDKGVVHGISSVLKPPS 191
            N P  NT   I  ++++   FSTLLS V  +G++   ++G    TVFAPTN AF+K+PA+ LQ  +++ A  R  +L HVVP  V ++++ G      A  G L  ++ GG  ++I+ A VT   D     GV+H I +VL PPS
Sbjct:   25 NVPTGNT---IAAVVSNDPNFSTLLSAVQAAGLTQT-LAGPGPFTVFAPTNAAFAKVPADQLQALLNNPAQLRAVLLYHVVPGRVTSAQVAGLSSATTAQGGTLTVSASGGT-VRINDATVTR-ADVPASNGVIHVIDTVLLPPS 163          
BLAST of Gcaud7886.t1 vs. uniprot
Match: A0A7C7DQH8_9CHLR (Fasciclin domain-containing protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C7DQH8_9CHLR)

HSP 1 Score: 73.2 bits (178), Expect = 1.180e-10
Identity = 58/174 (33.33%), Postives = 88/174 (50.57%), Query Frame = 0
Query:   57 TDPCIGTLLTSANRFSTLLSIVAVSGISP---AAISGTVFAPTNEAFSKLPAELLQMFMSDAAFARNFILRHVVPEVVPASKLTGNGFLDAAFDGPLGYTSYGGKQLKIDGAGVTSFCDQKYDKGVVHGISSVLKPPSQKWPSIEQTYSAPPASAPQKSEFATIRARGATQTAT 227
            T   I  L  +   FSTLL    V+G++    AA   T+FAPT++AF+KLP   L   ++D A  +N +L HVV   + A +L   G  +AA    L +T+ G  Q++++G  +    + +   G+VH I SVL PP +  P+ E     P   A   +E AT+     T+  T
Sbjct:  443 TGATIADLAGTLRGFSTLLKAAEVAGLADDLAAAGPFTIFAPTDDAFAKLPPGALDALLADPAALQNVLLYHVVLSRLTAEELAAAGIAEAAQGNLLVFTTMG-DQVRVNGVPLVQ-ANIEASNGIVHVIDSVLMPPQR--PTTEVVTETPGEEA-LATEAATVVVAAVTEAPT 611          
BLAST of Gcaud7886.t1 vs. uniprot
Match: A0A318SFM5_9DEIO (Transforming growth factor-beta-induced protein n=1 Tax=Deinococcus yavapaiensis KR-236 TaxID=694435 RepID=A0A318SFM5_9DEIO)

HSP 1 Score: 72.4 bits (176), Expect = 2.010e-10
Identity = 50/134 (37.31%), Postives = 71/134 (52.99%), Query Frame = 0
Query:   59 PCIGTLLTSANRFSTLLSIVAVSGISPAAISG--TVFAPTNEAFSKLPAELLQMFMSDAAFARNFILRHVVPEVVPASKLTGNGFLDAAFDGPLGYTSYGGKQLKIDGAGVTSFCDQKYDKGVVHGISSVLKPP 190
            P I  ++ +  RFSTLL+ V  +G+     SG  TVFAPTN+AF+K+PA  LQ  +++    R  +  HVV   +PA+ +     L +   GP    +     +KI GA VT   D     GV+H I +VL PP
Sbjct:  446 PTIAQIVATDPRFSTLLAAVQAAGLVETLNSGEFTVFAPTNDAFAKIPAAQLQAVLANPDQLRRLLTFHVVAGRMPAADIASQTVLTSVA-GPTLTVAVDNAMVKIGGATVTQ-ADVAASNGVIHVIDTVLMPP 577          
BLAST of Gcaud7886.t1 vs. uniprot
Match: UPI001B7FE43D (fasciclin domain-containing protein n=1 Tax=Deinococcus pimensis TaxID=309888 RepID=UPI001B7FE43D)

HSP 1 Score: 70.5 bits (171), Expect = 2.570e-10
Identity = 50/141 (35.46%), Postives = 72/141 (51.06%), Query Frame = 0
Query:   52 APVTNTDPCIGTLLTSANRFSTLLSIVAVSGISPAAISGTVFAPTNEAFSKLPAELLQMFMSDAAFARNFILRHVVPEVVPASKLTGNGFLDAAFDGPLGYTSYGGKQLKIDGAGVTSFCDQKYDKGVVHGISSVLKPPSQ 192
            A +  TDP   TLL + N    + ++   +G  P     TVFAPTN+AF+K+PA  LQ  ++D A     +  HVV     A+++T +  L     GP    +  G  +K+ GA VT   D     GV+H I +VL PP+Q
Sbjct:  137 AQIVATDPRFSTLLAALNAAGLVETL---NGAGPF----TVFAPTNDAFAKIPAADLQALLADKAALTRVLTYHVVAGAQTAAQVTASPTLTTVA-GPTVAVTVDGSTVKVGGATVTQ-ADVTASNGVIHVIDTVLMPPAQ 268          
The following BLAST results are available for this feature:
BLAST of Gcaud7886.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIV0_9FLOR1.850e-11960.31Transforming growth factor-beta-induced protein ig... [more]
A0A291FEC1_GRIPA8.730e-5843.00LR9 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID... [more]
R7QRM9_CHOCR8.350e-5642.32FAS1 domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A1X6NYY5_PORUM4.900e-5344.09FAS1 domain-containing protein n=1 Tax=Porphyra um... [more]
A0A7S0ZBR4_9RHOD4.430e-4638.01Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z027_PORPP8.740e-4241.63FAS1 domain-containing protein n=2 Tax=Porphyridiu... [more]
UPI0015E13AF82.730e-1338.62fasciclin domain-containing protein n=2 Tax=Deinoc... [more]
A0A7C7DQH8_9CHLR1.180e-1033.33Fasciclin domain-containing protein (Fragment) n=1... [more]
A0A318SFM5_9DEIO2.010e-1037.31Transforming growth factor-beta-induced protein n=... [more]
UPI001B7FE43D2.570e-1035.46fasciclin domain-containing protein n=1 Tax=Deinoc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000782FAS1 domainSMARTSM00554fasc_3coord: 91..190
e-value: 5.5E-19
score: 79.1
IPR000782FAS1 domainPFAMPF02469Fasciclincoord: 71..189
e-value: 1.1E-15
score: 57.9
IPR000782FAS1 domainPROSITEPS50213FAS1coord: 58..187
score: 17.038792
IPR036378FAS1 domain superfamilyGENE3D2.30.180.10FAS1 domaincoord: 39..191
e-value: 1.1E-21
score: 79.6
IPR036378FAS1 domain superfamilySUPERFAMILY82153FAS1 domaincoord: 59..190
NoneNo IPR availablePANTHERPTHR10900PERIOSTIN-RELATEDcoord: 65..225
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..321
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_465_length_24681_cov_4.375641contigNODE_465_length_24681_cov_4.375641:16595..17560 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7886.t1Gcaud7886.t1Gracilaria caudata M_176_S67 malemRNANODE_465_length_24681_cov_4.375641 16595..17560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7886.t1 ID=Gcaud7886.t1|Name=Gcaud7886.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=322bp
MDYSLLTMAFASSQALPLRHVSAVPVTAPLRPSVKRPARSFRSMLRMVQK
NAPVTNTDPCIGTLLTSANRFSTLLSIVAVSGISPAAISGTVFAPTNEAF
SKLPAELLQMFMSDAAFARNFILRHVVPEVVPASKLTGNGFLDAAFDGPL
GYTSYGGKQLKIDGAGVTSFCDQKYDKGVVHGISSVLKPPSQKWPSIEQT
YSAPPASAPQKSEFATIRARGATQTATLGGRKAMGLISQRPFWMYGPPYC
AAKQEEYEPISAAVPEVSSVDYQLMPPGSVVVSPDSVNASELNPVSGLSK
YIGQTKRIDGGDAISDYSRLD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000782FAS1_domain
IPR036378FAS1_dom_sf