Gcaud700.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud700.t1
Unique NameGcaud700.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length141
Homology
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BLAST of Gcaud700.t1 vs. uniprot
Match: A0A2V3IRP5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRP5_9FLOR)

HSP 1 Score: 182 bits (462), Expect = 6.600e-54
Identity = 76/133 (57.14%), Postives = 109/133 (81.95%), Query Frame = 0 
Query:    6 EQTQVFSGPDTVNGAVEFANEVPGTIFVTYAGNTFSWSLRVIGTAGDVVVQRSFPRPEYKLSTICKVKGKNEVTEEHLSFSGIDSEFKEFIESCHSGAVHPDLDSKVAYNDLATVCALVSSSDLKQWVDVDHW 138
            ++T+ FSGPDTVNG V+F+N + G++F TYAGNTFSW LRV+GT GD++VQR+FP+P YKLS + KV+G+NEV EE +SFSG+++EF  F++SC  G +HP L  + A+N++ATVCA ++SS+ ++WVDV+ W
Sbjct:  231 QKTKAFSGPDTVNGVVQFSNGLSGSVFATYAGNTFSWELRVVGTTGDIIVQRTFPQPGYKLSAVRKVEGENEVFEEQISFSGVEAEFDAFVQSCRDGNLHPSLGGQEAFNEVATVCAFLASSESQEWVDVERW 363
The following BLAST results are available for this feature:
BLAST of Gcaud700.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IRP5_9FLOR6.600e-5457.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.360.10Dihydrodipicolinate Reductase; domain 2coord: 4..136
e-value: 1.7E-11
score: 46.1
NoneNo IPR availableSUPERFAMILY55347Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domaincoord: 11..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_11327_length_495_cov_5.081683contigNODE_11327_length_495_cov_5.081683:2..422 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud700.t1Gcaud700.t1Gracilaria caudata M_176_S67 malemRNANODE_11327_length_495_cov_5.081683 2..422 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud700.t1 ID=Gcaud700.t1|Name=Gcaud700.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=141bp
LCDLHEQTQVFSGPDTVNGAVEFANEVPGTIFVTYAGNTFSWSLRVIGTA
GDVVVQRSFPRPEYKLSTICKVKGKNEVTEEHLSFSGIDSEFKEFIESCH
SGAVHPDLDSKVAYNDLATVCALVSSSDLKQWVDVDHWECX
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