Gcaud2509.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2509.t1
Unique NameGcaud2509.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length187
Homology
BLAST of Gcaud2509.t1 vs. uniprot
Match: A0A2V3IIM9_9FLOR (Histone chaperone ASF1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIM9_9FLOR)

HSP 1 Score: 343 bits (879), Expect = 7.780e-119
Identity = 164/182 (90.11%), Postives = 174/182 (95.60%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDKNHDQELDAVLLPADNTGRFMFVLQVDAPNSSIIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDMHENPPSKPLINKIQRTVAAHEPRVTKFPHKFDFREVKTGTPAEPELSTDGSHFAAEVSRQ 182
            MAAVDIFDVKVLDNPAP+TNPLQFEITYDVRE+LKEDIEWKVIYVG AED++HDQELDAVLLPADNTGRFMFVLQVD+PN S+IPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTD D+HENPP KPL+NKIQRT+AAHEPRVTKFPHKFDFRE KTGTPAEPELSTDGSHFA  V+ Q
Sbjct:    1 MAAVDIFDVKVLDNPAPYTNPLQFEITYDVRETLKEDIEWKVIYVGSAEDESHDQELDAVLLPADNTGRFMFVLQVDSPNPSLIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDADLHENPPPKPLVNKIQRTIAAHEPRVTKFPHKFDFREPKTGTPAEPELSTDGSHFATGVANQ 182          
BLAST of Gcaud2509.t1 vs. uniprot
Match: R7QHB1_CHOCR (Similar to anti-silencing factor n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHB1_CHOCR)

HSP 1 Score: 288 bits (737), Expect = 3.390e-97
Identity = 140/187 (74.87%), Postives = 162/187 (86.63%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDKNHDQELDAVLLPADNTGRFMFVLQVDAPNSSIIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDMHENPPSKPLINKIQRTVAAHEPRVTKFPHKFDFREVKTGTPAEPELSTDGSHFAA-EVSRQTNVA 186
            MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRE+LKEDIEWKVIYVG AED++ DQELD+VL+PA+  GRF FVLQVD PN + IPDSD+ GVTIVLLTCSY  AEF+RVGYYVSN+Y  P+++ENPPSKP+I++I RT+AA +PRVTKFPHKFDF +   GT A+PELSTDG+HFAA   S Q N+A
Sbjct:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVREALKEDIEWKVIYVGSAEDQSRDQELDSVLVPAEAQGRFKFVLQVDPPNPAKIPDSDIAGVTIVLLTCSYENAEFVRVGYYVSNEYPTPELNENPPSKPIIDQITRTIAATDPRVTKFPHKFDFSQPLQGTSADPELSTDGAHFAAGAASGQVNMA 187          
BLAST of Gcaud2509.t1 vs. uniprot
Match: UPI001E1D949C (probable histone chaperone ASF1A n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D949C)

HSP 1 Score: 243 bits (620), Expect = 8.040e-79
Identity = 132/208 (63.46%), Postives = 147/208 (70.67%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDKNHDQELDAVLLPADNTGRFMFVLQVDAPNSSIIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTD--------------------------------PDMHENPP-SKPLINKIQRTVAAHEPRVTKFPHKFDFRE-VKTGTPAEPELSTDGSH 174
            MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRE LKEDIEW+V+YVG AED+  DQELDAVLLPAD  GRF FVLQV  P+SS IP +D+LGVTIVLLTCSYNGAEFIRVGYYV+N++ D                                P    +PP S P I +I RT+AA EPR+TKFPH FDF + V TGT A+PELS DG H
Sbjct:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVREPLKEDIEWQVVYVGSAEDQTQDQELDAVLLPADTMGRFKFVLQVPPPDSSRIPAADILGVTIVLLTCSYNGAEFIRVGYYVNNEHPDFLPAPEPPAEDADDDMDTDDVVGSKRVELVSKPQPGASPPTSAPDIARITRTIAAAEPRITKFPHAFDFTQPVPTGTLADPELSGDGMH 208          
BLAST of Gcaud2509.t1 vs. uniprot
Match: A0A7S0ZH16_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZH16_9RHOD)

HSP 1 Score: 224 bits (570), Expect = 1.500e-71
Identity = 109/173 (63.01%), Postives = 136/173 (78.61%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDKNHDQELDAVLLPADNTGRFMFVLQVDAPNSSIIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDMHENPPSKPLINKIQRTVAAHEPRVTKFPHKFDFREVKTGTPAEPELSTDGS 173
            MAAVDIF+V VLDNPA F +PL FEITY+VRE L EDIEWKV+YVG AED+++DQEL++VLLPAD  GRF FVLQVDAP    +P  D+LGVT++LL+CSY   EFIRVGYYV+N+YTDP++ ENPP+ P I+K+ R + A +PRVTKF HKFDF   +T    E  L+ +G+
Sbjct:    1 MAAVDIFNVNVLDNPALFMHPLSFEITYEVREPLIEDIEWKVVYVGSAEDESYDQELESVLLPADTMGRFGFVLQVDAPRVEKLPVDDILGVTVILLSCSYKEKEFIRVGYYVNNEYTDPELIENPPATPQIDKLYRNIGADQPRVTKFAHKFDFSSDETPV-VEATLTENGA 172          
BLAST of Gcaud2509.t1 vs. uniprot
Match: A0A5J4Z2L2_PORPP (Histone chaperone ASF1B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2L2_PORPP)

HSP 1 Score: 227 bits (579), Expect = 2.010e-71
Identity = 105/155 (67.74%), Postives = 131/155 (84.52%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDKNHDQELDAVLLPADNTGRFMFVLQVDAPNSSIIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDMHENPPSKPLINKIQRTVAAHEPRVTKFPHKFDF 155
            MAAVDI +V VL+NPA FT+P+QFEITY+VRE+L++DIEWKV YVG AED+++DQ+LD VLLPAD  GRF FVLQVDAP   ++P+ DVLGVTI+LL+CSY   EFIRVGYYV+N+Y DP++ ENPP+  L++KI R + A +PRVTKFPHKFDF
Sbjct:    1 MAAVDIVNVSVLENPATFTSPIQFEITYEVREALEDDIEWKVTYVGSAEDESYDQDLDVVLLPADAVGRFGFVLQVDAPKFELLPEEDVLGVTIILLSCSYKDKEFIRVGYYVNNEYVDPELAENPPAHALVHKIVRNIGADQPRVTKFPHKFDF 155          
BLAST of Gcaud2509.t1 vs. uniprot
Match: M2W1D3_GALSU (Histone chaperone ASF1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W1D3_GALSU)

HSP 1 Score: 199 bits (507), Expect = 5.010e-62
Identity = 92/154 (59.74%), Postives = 120/154 (77.92%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDKNHDQELDAVLLPADNTGRFMFVLQVDAPNSSIIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDMHENPPSKPLINKIQRTVAAHEPRVTKFPHKFD 154
            M+AV++  V VL+NP  F +P +FEITY+VRE+L++DIEWKVIYV CA+D++ DQ LD VLLPAD  GRF F L+V APN + IPD D+LG+T VL+TCSY   EFIR+GYY++N+Y D +M+ENPP  PL+ +I+R + A EPRVT F H FD
Sbjct:    1 MSAVEVLQVDVLNNPGFFGDPFRFEITYEVREALQQDIEWKVIYVSCAKDESLDQVLDEVLLPADTVGRFQFTLEVAAPNPNKIPDDDLLGITAVLITCSYRDQEFIRIGYYLNNEYEDAEMNENPPCPPLLERIRRHIFAEEPRVTHFLHSFD 154          
BLAST of Gcaud2509.t1 vs. uniprot
Match: A0A4W3K5B9_CALMI (Uncharacterized protein n=7 Tax=Chondrichthyes TaxID=7777 RepID=A0A4W3K5B9_CALMI)

HSP 1 Score: 197 bits (501), Expect = 4.350e-61
Identity = 94/171 (54.97%), Postives = 122/171 (71.35%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDKNHDQELDAVLLPADNTGRFMFVLQVDAPNSSIIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDMHENPPSKPLINKIQRTVAAHEPRVTKFPHKFDFREVKTGTPAEPELSTD 171
            MA V + +V VLDNP+PF NP QFEIT++  E L +D+EWK+IYVG AE + HDQ LD+VL+     GR MFV Q DAPN+ +IPD+D +GVT+VL+TC+Y G EFIRVGYYV+N+YTDP++ ENPP KP   K+QR + A  PRVT+F   +D    KT      + ST+
Sbjct:    1 MAKVQVLNVVVLDNPSPFNNPFQFEITFECIEDLPDDLEWKIIYVGSAESEEHDQVLDSVLVGPVPAGRHMFVFQADAPNAVLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTDPELKENPPMKPDYAKLQRNILASNPRVTRFHINWDSTGEKTEDIENVDPSTN 171          
BLAST of Gcaud2509.t1 vs. uniprot
Match: A0A8C4QHT1_EPTBU (Anti-silencing function 1Ba histone chaperone n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4QHT1_EPTBU)

HSP 1 Score: 197 bits (500), Expect = 5.090e-61
Identity = 89/154 (57.79%), Postives = 119/154 (77.27%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDKNHDQELDAVLLPADNTGRFMFVLQVDAPNSSIIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDMHENPPSKPLINKIQRTVAAHEPRVTKFPHKFD 154
            MA V + +V VLDNP+PF NP QFEIT++  E+L ED+EWK++YVG AE +++DQ LD+VL+     GR MFV Q DAPN  +IPD+D +GVT+VL+TC+Y G EFIRVGYYV+N+YTDP++ ENPP KP+ +K+QR + A  PRVT+F   +D
Sbjct:    1 MAKVQVNNVVVLDNPSPFLNPFQFEITFECVENLPEDLEWKIVYVGSAESEDYDQILDSVLVGPVPAGRHMFVFQADAPNPELIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTDPELRENPPVKPIYDKLQRNILASNPRVTRFQINWD 154          
BLAST of Gcaud2509.t1 vs. uniprot
Match: W5MV14_LEPOC (Anti-silencing function 1B histone chaperone n=8 Tax=Neopterygii TaxID=41665 RepID=W5MV14_LEPOC)

HSP 1 Score: 196 bits (499), Expect = 7.450e-61
Identity = 89/149 (59.73%), Postives = 116/149 (77.85%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDKNHDQELDAVLLPADNTGRFMFVLQVDAPNSSIIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDMHENPPSKPLINKIQRTVAAHEPRVTKF 149
            MA V + +V VLDNP+PF NP QFEIT++  E L ED+EWK+IYVG AE + +DQ LD+VL+     GR MFV Q DAPN+S+IP+SD +GVT+VL+TC+Y G EFIRVGYYV+N+YTDP++ ENPP KP  +++QR + A  PRVT+F
Sbjct:    1 MAKVQVLNVAVLDNPSPFGNPFQFEITFECMEDLPEDLEWKIIYVGSAESEEYDQTLDSVLVGPVPAGRHMFVFQADAPNTSLIPESDAVGVTVVLITCTYRGQEFIRVGYYVNNEYTDPELRENPPLKPDYSQLQRNILASNPRVTRF 149          
BLAST of Gcaud2509.t1 vs. uniprot
Match: A0A4W3HNT1_CALMI (Uncharacterized protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3HNT1_CALMI)

HSP 1 Score: 196 bits (498), Expect = 1.280e-60
Identity = 91/154 (59.09%), Postives = 117/154 (75.97%), Query Frame = 0
Query:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDKNHDQELDAVLLPADNTGRFMFVLQVDAPNSSIIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDMHENPPSKPLINKIQRTVAAHEPRVTKFPHKFD 154
            MA V + +V VLDNP+PF NP QFEIT++  E L ED+EWK+IYVG AE + +DQ LD+VL+     GR MFV Q DAPN S+IPD+D +GVT+VL+TC+Y G EFIRVGYYV+N+YTDP++ ENPP KP  +K+QR + A  PRVT+F   +D
Sbjct:    1 MAKVQVNNVVVLDNPSPFFNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAGRHMFVFQADAPNPSLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTDPELRENPPVKPDFSKLQRNILASNPRVTRFHINWD 154          
The following BLAST results are available for this feature:
BLAST of Gcaud2509.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIM9_9FLOR7.780e-11990.11Histone chaperone ASF1 n=1 Tax=Gracilariopsis chor... [more]
R7QHB1_CHOCR3.390e-9774.87Similar to anti-silencing factor n=1 Tax=Chondrus ... [more]
UPI001E1D949C8.040e-7963.46probable histone chaperone ASF1A n=1 Tax=Mercenari... [more]
A0A7S0ZH16_9RHOD1.500e-7163.01Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z2L2_PORPP2.010e-7167.74Histone chaperone ASF1B n=1 Tax=Porphyridium purpu... [more]
M2W1D3_GALSU5.010e-6259.74Histone chaperone ASF1 n=1 Tax=Galdieria sulphurar... [more]
A0A4W3K5B9_CALMI4.350e-6154.97Uncharacterized protein n=7 Tax=Chondrichthyes Tax... [more]
A0A8C4QHT1_EPTBU5.090e-6157.79Anti-silencing function 1Ba histone chaperone n=1 ... [more]
W5MV14_LEPOC7.450e-6159.73Anti-silencing function 1B histone chaperone n=8 T... [more]
A0A4W3HNT1_CALMI1.280e-6059.09Uncharacterized protein n=1 Tax=Callorhinchus mili... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036747Histone chaperone ASF1-like superfamilyGENE3D2.60.40.1490coord: 1..157
e-value: 3.1E-63
score: 214.3
IPR036747Histone chaperone ASF1-like superfamilySUPERFAMILY101546ASF1-likecoord: 1..154
IPR006818Histone chaperone ASF1-likePFAMPF04729ASF1_hist_chapcoord: 1..154
e-value: 3.5E-59
score: 199.1
IPR006818Histone chaperone ASF1-likePANTHERPTHR12040ANTI-SILENCING PROTEIN 1coord: 1..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_441_length_25217_cov_4.561570contigNODE_441_length_25217_cov_4.561570:15748..16420 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2509.t1Gcaud2509.t1Gracilaria caudata M_176_S67 malemRNANODE_441_length_25217_cov_4.561570 15748..16420 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2509.t1 ID=Gcaud2509.t1|Name=Gcaud2509.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=187bp
MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAED
KNHDQELDAVLLPADNTGRFMFVLQVDAPNSSIIPDSDVLGVTIVLLTCS
YNGAEFIRVGYYVSNQYTDPDMHENPPSKPLINKIQRTVAAHEPRVTKFP
HKFDFREVKTGTPAEPELSTDGSHFAAEVSRQTNVA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036747ASF1-like_sf
IPR006818ASF1-like