Gcaud2575.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2575.t1
Unique NameGcaud2575.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length623
Homology
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BLAST of Gcaud2575.t1 vs. uniprot
Match: R7Q8N3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8N3_CHOCR)

HSP 1 Score: 295 bits (756), Expect = 3.020e-90
Identity = 146/343 (42.57%), Postives = 226/343 (65.89%), Query Frame = 0 
Query:  278 SRLPWWRATESLVSLPSKPQNLEDLLKFYVMAVIRSCVRESWSAEKLKHCFDKDPTSSRGKAFLAISSSLLLMERARHMGQCHVKWRPELIQELVQRRIIEWSKVPKHVSFDHFAGCDVCLGQREATIRLWLRGDRYDSSDFWPGSSRVDVLSSEERLDQDIMSVAVELV-GSTKNERFIAIGEAKDRVDAEFWVDPQCLRKCLLFHELVHATAIIAQDLRILIEDELRDGVVHLDMRNRVPGDEKLGVPERLERYLVQAVTENRDFLKRRTKHLMEIIRLGDIYFSSVEEELIDSGA-PEGRRARKTPQMYDPPIDLNDEKYKDRIERIVSLTQQREINASF 618
            ++LPWWR+  S +S P +     D+L+ Y++ +IRSC+R SW+AEKL+  ++ +P+S RG AFLA+SSSLL+M RARHMGQC   W  +L+QEL+QRR +EW+ +     F HF GC+ CL  R AT  L L+G +YDSSDFWP S R+D+L+S E      +++AVEL  GS   +  I      D  + EFWVD QCLRKCL+FHELVH+T+I+ +++  L+EDEL+DGVV +    ++P +E   + + ++ +LV  +  N+ FL+++ +H  ++  +G+ YFS+V+E +  S   P+      + ++YD P+ L  E+Y  R++ + SLT+ ++ + SF
Sbjct:  102 AQLPWWRSVGSRLSRPMRRSKDTDVLRGYILTLIRSCLRPSWNAEKLRESYELNPSSIRGSAFLAVSSSLLIMHRARHMGQCRTMWHTQLLQELLQRRELEWTAIETDPCFQHFLGCEACLAHRPATRCLRLKGVKYDSSDFWPMSCRLDILASTEA--DGALTLAVELAPGSRPGQPTIG-----DEGEVEFWVDEQCLRKCLVFHELVHSTSILTEEVMCLVEDELQDGVVSVRKAQQLP-EEGTSLVDLVQCHLVDVLCRNKHFLEKQIQHFADMTHIGEAYFSAVDEGIPGSHQEPKDAETNSSARVYDAPLSLRHEQYAGRMKTLESLTEIKKPSTSF 436
The following BLAST results are available for this feature:
BLAST of Gcaud2575.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7Q8N3_CHOCR3.020e-9042.57Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_427_length_25918_cov_4.599721contigNODE_427_length_25918_cov_4.599721:6077..8101 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2575.t1Gcaud2575.t1Gracilaria caudata M_176_S67 malemRNANODE_427_length_25918_cov_4.599721 6077..8101 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2575.t1 ID=Gcaud2575.t1|Name=Gcaud2575.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=623bp
MVEKGKRKDAVQPASSTQAAKRHKLAVKRPSAAPALQNTKKSKTACSALP
LVKDVDNVKSEGTTGEVSLSARDEPLPAGEQLPSEAKTQGSHSKERPKNK
SAGEKQSEQRKEVVAQQGDGSRIRSKRRKVESEIKNTQREKEHRASKSPK
KASNGNVVTTLKRDKPEPPPQTPSQTSPHASKSKKGLAKRATPKSPAAKS
SRPKKETPKETREFVEECIVDEGTAAMPNPEPRASSGKKRKRAQRPTKGY
HTEVVLDSSEHDVNPDQKSMDLILNARSRLPWWRATESLVSLPSKPQNLE
DLLKFYVMAVIRSCVRESWSAEKLKHCFDKDPTSSRGKAFLAISSSLLLM
ERARHMGQCHVKWRPELIQELVQRRIIEWSKVPKHVSFDHFAGCDVCLGQ
REATIRLWLRGDRYDSSDFWPGSSRVDVLSSEERLDQDIMSVAVELVGST
KNERFIAIGEAKDRVDAEFWVDPQCLRKCLLFHELVHATAIIAQDLRILI
EDELRDGVVHLDMRNRVPGDEKLGVPERLERYLVQAVTENRDFLKRRTKH
LMEIIRLGDIYFSSVEEELIDSGAPEGRRARKTPQMYDPPIDLNDEKYKD
RIERIVSLTQQREINASFATFG*
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