Gcaud8476.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud8476.t1
Unique Name	Gcaud8476.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	274

Homology

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BLAST of Gcaud8476.t1 vs. uniprot
Match: A0A2V3J6K1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6K1_9FLOR)

HSP 1 Score: 275 bits (702), Expect = 2.670e-89
Identity = 150/275 (54.55%), Postives = 195/275 (70.91%), Query Frame = 0

Query:    1 MTASAHAALDALHVALNSANTQVNQLSDRLQAELGPHSEALALLSTLRKLEKQLPELRQRMLHIYQSKAQVVSQCQRQLDQCHNFASRVAPLVDPSLQLHRHTAELVASFQATTDALSAHVPPPQEQIDL--DPYRVASLESPNVESPVPRQPPRNATQNXXXXXXXXXXXSSSQMPSPTAHSNFATPPSFEPISKASYNRLPRNIKIRAGKLPEINAFYEKVFTFLHSQDNAPVSSKSLMTAMGEKSMEKFEVLRALVALTATKKGWQLTNPKS 273
            MTASAHAALDALH+ALNSA+TQ+N LS RLQ+ELG H  AL+L++ +R+LEKQLP LRQRML +Y  KA +VS CQRQL +C++FASR+AP++DP+L+   +TA+L+ +FQ  +D LS H+PP    +DL  D +     +  NV +    QP + +              SSS+  +P +     T   F+PISKA+YNRLPRNIKIRAG+LP INAFY+KVF F+HSQ N+P S K LM A+ ++SM+KFEVLRAL   T TKKGWQLT+P S
Sbjct:    1 MTASAHAALDALHIALNSADTQLNHLSVRLQSELGHHDTALSLITAVRRLEKQLPALRQRMLTVYDQKAHLVSGCQRQLQECYSFASRIAPVIDPALKPTDYTADLITAFQNASDTLSHHLPPQPHHLDLNFDRHDSGQSDQSNVATTPANQPSKPS--------------SSSRAKTPPSVPKPNTSSHFDPISKAAYNRLPRNIKIRAGRLPAINAFYQKVFDFMHSQKNSPQSDKKLMVALEQQSMDKFEVLRALAVFTCTKKGWQLTSPSS 261

The following BLAST results are available for this feature:

BLAST of Gcaud8476.t1 vs. uniprot

BLAST of Gcaud8476.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J6K1_9FLOR	2.670e-89	54.55	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 9..29
None	No IPR available	COILS	Coil	Coil	coord: 40..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..190

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_412_length_26355_cov_4.423431	contig	NODE_412_length_26355_cov_4.423431:21937..22758 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud8476.t1	Gcaud8476.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_412_length_26355_cov_4.423431 21937..22758 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud8476.t1 ID=Gcaud8476.t1|Name=Gcaud8476.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=274bp
MTASAHAALDALHVALNSANTQVNQLSDRLQAELGPHSEALALLSTLRKL
EKQLPELRQRMLHIYQSKAQVVSQCQRQLDQCHNFASRVAPLVDPSLQLH
RHTAELVASFQATTDALSAHVPPPQEQIDLDPYRVASLESPNVESPVPRQ
PPRNATQNQKQKQKQKQKPSSSQMPSPTAHSNFATPPSFEPISKASYNRL
PRNIKIRAGKLPEINAFYEKVFTFLHSQDNAPVSSKSLMTAMGEKSMEKF
EVLRALVALTATKKGWQLTNPKS*