Gcaud7079.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7079.t1
Unique NameGcaud7079.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length207
Homology
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BLAST of Gcaud7079.t1 vs. uniprot
Match: A0A2V3IME8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME8_9FLOR)

HSP 1 Score: 258 bits (660), Expect = 7.690e-85
Identity = 129/204 (63.24%), Postives = 152/204 (74.51%), Query Frame = 0 
Query:    4 SICLFALALSAATISTFAQPITLERKQYVTYAFCEVTA-ADHCQFAYEGLHGYFDHVPHGIGNYSMSGSSDGAFTPRIIQKEPSYFDSAVGYVKSDDALRDVYTCEPEYFNNGAYYETRCTYLNVPGRLYDAERIPGVRGSGISRVHGAALRRYVPNGACVLMYLTEYEILDTSVSPPRVRETVKMSARQARIENKCVQFYTQY 206
            S+ +F L++   T   + Q   L   Q VTY +CEV      C+FA++ L+G FDHV  G GN+S+ GS  G+FTPRI+ K P YFDS +G VKS D  RDV+TCEPEYFNNG+YYE RCTYLN+PGRL++A RI G RGSGISR    ALRR+VPNGACVLMYLTEYEILDTSVSPPRVRE V+M ARQARIEN CV FY Q+
Sbjct:    4 SLHIFILSVLVLTCGIYGQETGLAINQGVTYEWCEVKGDTGLCRFAFKDLYGTFDHVKWGSGNFSLKGSHSGSFTPRIVWKSPEYFDSEIGRVKSVDRKRDVFTCEPEYFNNGSYYEHRCTYLNIPGRLFNAVRIRGTRGSGISRSREHALRRHVPNGACVLMYLTEYEILDTSVSPPRVREVVRMPARQARIENNCVLFYAQF 207
The following BLAST results are available for this feature:
BLAST of Gcaud7079.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IME8_9FLOR7.690e-8563.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..206
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_377_length_27894_cov_4.622703contigNODE_377_length_27894_cov_4.622703:12846..13466 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7079.t1Gcaud7079.t1Gracilaria caudata M_176_S67 malemRNANODE_377_length_27894_cov_4.622703 12846..13466 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7079.t1 ID=Gcaud7079.t1|Name=Gcaud7079.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=207bp
MKLSICLFALALSAATISTFAQPITLERKQYVTYAFCEVTAADHCQFAYE
GLHGYFDHVPHGIGNYSMSGSSDGAFTPRIIQKEPSYFDSAVGYVKSDDA
LRDVYTCEPEYFNNGAYYETRCTYLNVPGRLYDAERIPGVRGSGISRVHG
AALRRYVPNGACVLMYLTEYEILDTSVSPPRVRETVKMSARQARIENKCV
QFYTQY*
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