Gcaud9995.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9995.t1
Unique NameGcaud9995.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length754
Homology
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BLAST of Gcaud9995.t1 vs. uniprot
Match: A0A2V3J0V5_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0V5_9FLOR)

HSP 1 Score: 137 bits (346), Expect = 1.220e-33
Identity = 79/145 (54.48%), Postives = 95/145 (65.52%), Query Frame = 0 
Query:  572 ISILLADGEGVGLEDIKKTAVADALRIGSLLALGDWKIAPNEIDGVTDDAEGIPENDKLVLGASDTISITSEGATNSRVLSEGDGVGVEEISKTIAADALGTPGLLILGAVNGPADPRGLIEAPTDVLTLGVAEILPKLTTKLAD 716
            + +LLADGE  G+E   +TAV DAL IG+LLALG W IAP+EIDG+ +DA+GIP+ DKLVLGASDTIS+TSEGAT S  L+EGDGVG     +   +                 AD  GLI+  +D LTLGV E LP LTT L D
Sbjct:   11 VPVLLADGELRGVELNSRTAVVDALDIGNLLALGLWMIAPDEIDGLAEDAKGIPDKDKLVLGASDTISVTSEGATKSPELAEGDGVGRSRYQQHHCSGCT--------------ADLEGLIDIRSDALTLGVPETLPMLTTTLVD 141
[Close]
BLAST of Gcaud9995.t1 vs. uniprot
Match: A0A2V3IFZ0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFZ0_9FLOR)

HSP 1 Score: 118 bits (296), Expect = 1.020e-27
Identity = 68/130 (52.31%), Postives = 84/130 (64.62%), Query Frame = 0 
Query:  572 ISILLADGEGVGLEDIKKTAVADALRIGSLLALGDWKIAPNEIDGVTDDAEGIPENDKLVLGASDTISITSEGATNSRVLSEGDGVGVEEISKTIAADALGTPGLLILGAVNGPADPRGLIEAPTDVLTL 701
            + +LLADGE  G+E   +T V DAL IG+LLALG W IAP+EIDG+ +DA+GIP+ DKLVLGASDTIS+TSEGAT S  L+EGDGVG     +   +                 AD  GLI+  +D LTL
Sbjct:   11 VPVLLADGELRGVELNSRTVVVDALDIGNLLALGLWMIAPDEIDGLAEDAKGIPDKDKLVLGASDTISVTSEGATKSPELAEGDGVGRSRYQQHHCSGCT--------------ADLEGLIDIRSDALTL 126
The following BLAST results are available for this feature:
BLAST of Gcaud9995.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J0V5_9FLOR1.220e-3354.48Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IFZ0_9FLOR1.020e-2752.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 533..554

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_132_length_45408_cov_4.668756contigNODE_132_length_45408_cov_4.668756:34175..36530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9995.t1Gcaud9995.t1Gracilaria caudata M_176_S67 malemRNANODE_132_length_45408_cov_4.668756 34175..36530 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9995.t1 ID=Gcaud9995.t1|Name=Gcaud9995.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=754bp
MSIAFEGAVASIPLGKGEGAGLGEINTTAVADTLGDTSVFALGVIVLASN
ESDGIPDDKNGVCEKNNVVLGASEISSIISEGVTRSLLLGNGAGVEAEGI
NRTIVADGLGIGPRLTFGVFGSPSEDVEGLIAVPIDAITLCVPERLSERS
DKLVDGLAKTSISDTTENASDPSAMLGDTINGMAVSSASDVVSIRCDGAF
ASLSFFEGDGVGVVEINITSAEELILGVGMIVSEKSNWLADDGKGISEKE
TAVLGAPELVSVVSKGITSLSLGVGERDGVADAPGIGTLLVLGVGLFVSK
DSEILADVVKDASGTEVDTIGASDIISVIPEGVTPVVLLAKGDGVGVEDK
NRTIVADAFGTPSWLALGSVNVPSEDPDGLLEAFISKRTLGDASTFPKVS
AELTDGLADMSILSRGDGRDGRSVSSKVLLEDEIVALETGASDINSAVSE
GASKSLTLAEGDKVGVVDTKKTIVTDAAGTAGWLAFGRSGKPPGDPNGLM
ETPVDSARLGVSVAEMLPKPPDKLTDGRGDISTFGAGEDASVPSDGLAED
ANEVRGDGASDMISVSSDGATISILLADGEGVGLEDIKKTAVADALRIGS
LLALGDWKIAPNEIDGVTDDAEGIPENDKLVLGASDTISITSEGATNSRV
LSEGDGVGVEEISKTIAADALGTPGLLILGAVNGPADPRGLIEAPTDVLT
LGVAEILPKLTTKLADGPLETLTLGVVEKISGPPDEVTDGLVDALPPHSM
GSL*
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