Gcaud9994.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9994.t1
Unique NameGcaud9994.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1502
Homology
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BLAST of Gcaud9994.t1 vs. uniprot
Match: A0A2V3IRZ4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ4_9FLOR)

HSP 1 Score: 261 bits (666), Expect = 1.680e-66
Identity = 142/229 (62.01%), Postives = 180/229 (78.60%), Query Frame = 0 
Query: 1278 ILWTPSPDPTVPEPCSNLPSVVPDSSLLAQTENFQRVRLSIQVAGPNMTNTCHLSDEIVQRFVNLSAMSTLSSAHLWFITSIEDGPAVLADGSTLVVVE--EEVGAIE---STSPQHSASPE-DVEELFPGSIVFGVTAFLNPFSVELVEAAYLDYVRSQNIVRALRRSGHDEIHWTGIVSEPVVVDKRRAPAVEVSSGVSGGYIAGIAFGTLLIVGAAVFIVAEAGRP 1500
            +L +PSP       C NLP +VPDSSLLA+T+NFQRVR+ +QVAGPN+T++C L++ I QRF+NLSAM+TLS+ +LWFITSIEDGPAV    S+LV++E  EEV  IE   S SP  S S E  V+EL+PGS+VF VTAFL+PFSVEL   AY++Y++SQNIVRAL  +G+D+I W G++ EP ++D RRA  V VSSG+SGGYIAGIAFGT++I+GAAVFI AEA RP
Sbjct: 2132 VLESPSPGAVPGLNCPNLPPIVPDSSLLARTDNFQRVRMGMQVAGPNLTSSCDLTNVIAQRFINLSAMNTLSNRNLWFITSIEDGPAVYDGESSLVLIEDLEEVTDIEITLSNSPSPSQSLEASVQELYPGSVVFRVTAFLDPFSVELAIGAYIEYIQSQNIVRALAVTGYDDIQWIGMILEPAIIDTRRAENVVVSSGLSGGYIAGIAFGTIVILGAAVFIAAEARRP 2360
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BLAST of Gcaud9994.t1 vs. uniprot
Match: R7QNU8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNU8_CHOCR)

HSP 1 Score: 153 bits (386), Expect = 2.050e-34
Identity = 89/226 (39.38%), Postives = 137/226 (60.62%), Query Frame = 0 
Query: 1277 VILWTPSP-DPTVPE-PCSNLPSVVPDSSLLAQTENFQRVRLSIQVAGPNMTNTCHLSDEIVQRFVNLSAMSTLSSAHLWFITSIEDGPAVLADGSTLVVVEE--EVGAIESTSPQHSASPEDVEELFPGSIVFGVTAFLNPFSVELVEAAYLDYVRSQNIVRALRRSGHDEIHWTGIVSEPVVVDKRRAPAVEVSSGVS--GGYIAGIAFGTLLIVGAAVFIVAE 1496
            V +W+P P +  VP  PC++   +V D   L  T N+QRV + IQVAGPN+TNTC L++ +++RF+N SA +T S+A  W++T +EDGPAV +   +LV + E  E G++  T     ++     EL+ GS++F V A++ P SV+L   +Y+DYV SQ IV AL+  G  +I WTG++  P ++D R A   +     S  GG I  +  G + +V  A+F+V +
Sbjct:  442 VAVWSPVPSEEYVPLFPCADY-GLVHDMRELNHTNNYQRVSMQIQVAGPNVTNTCGLTERVLERFINFSAANTQSNARQWYVTRVEDGPAVYSGQFSLVTIVEPDEFGSVNETGSPSPSATAKAAELYRGSVIFAVVAYMKPASVDLAAGSYMDYVMSQRIVYALQDQGFRDILWTGMLMSPQLLDLRTASVEDSEEKGSNIGGTIGLVCLGVVGVVVLAIFVVKD 666
The following BLAST results are available for this feature:
BLAST of Gcaud9994.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IRZ4_9FLOR1.680e-6662.01Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QNU8_CHOCR2.050e-3439.38Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1045..1061
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 747..824
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1042..1116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 680..722
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1078..1116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 941..1001
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 693..712
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 902..1001
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 747..800
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1496..1501
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1475..1495
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..1474
NoneNo IPR availableTMHMMTMhelixcoord: 1473..1495

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_132_length_45408_cov_4.668756contigNODE_132_length_45408_cov_4.668756:29602..34107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9994.t1Gcaud9994.t1Gracilaria caudata M_176_S67 malemRNANODE_132_length_45408_cov_4.668756 29602..34107 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9994.t1 ID=Gcaud9994.t1|Name=Gcaud9994.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1502bp
MDVSPPVRSVDISIGPSVNFSDSKESTSGSPFPSRADLVTPLDMVERSSE
APSTTLLFSEMPSTSFTSPSNSLDISAFTPIASQLPIVVTPSTMVPTASS
TPTFSPLSSKRDFVAPSNGMDMTSDALPTTVLPIESGLISSANVMDVLDT
DSPAPSERELPTPVASSTMIPMIFLTQTLSPLLSKGDLVVPSIGMEMTSE
ALLTTVLPIESDLIPSANVMDVLDTDSPAPSERELPTLVASSTMIPMIFP
TPTLSPLSSKGDLVVPSIGMEMTSEALPTTVLSTESAFISSANLMDVFDT
DSPAPSAREVPTPIASSTMIPMIFPTPTLSPLSSKGDLVVPSIGMEMTSE
ALPTTVLSTESAFISSANLMDVFDTDSPAPSAREVPTPIASSTMIPMIFP
TPTLSPLLSKEDLVVPSSGMEMTSEVLPTAVLPTESAFISPANLMDVFDT
DSPAPSAREVPTPIASSTMIPMIFPTPTLSPLLSKEDLVVPSSGMEMTSE
VLPTAVLPTESAFISPANLMDVFDTDSPAPSAREVPTPIASSTMIPMIFP
TQSLSPLSSKGDLVVPSTGMEMTSEALLTTVLPIESDLISSANLMDVLDT
DSPAPSASELPTPFASSTMIPMISPTPTLSPLSNKRDLVVPSNGMEFMSE
APSTTILPYETPFVSSANLMDSFDTSSPAPSVSRMPVPGVSPTIVPSASS
SPALSPSRSKTDVAAPSEDAETIPDMATSIFGTPVSSEMPIALISFSPVS
SSEPSGSPASTTTNTSSTSDASFDTLATESQLPTITTLPAQSSSLLSELP
VSPAPTPPSPTSASDSEDTPEVTLSLAPTATPSRTRPLFSISNVSAELSF
SPSHRTLSPSVIPATPVVSVLVTPFAATASSEEVILNDMQSSFSSLTMNP
PRVTETTELKTKNSPEPGELNPEKPLVILSSDAPEMMTTLRPMETSPSVA
SDTSFPEASPTVTPRATDFPISSLATQSVTPSAAPGSSAQGPNLGSTTPL
SVSAIPPTSSISPSLGSTPLSSFISATPLASALVTPFAPNPSNVEAPGDM
QSSTTSFSVDPLFTEMLERGETGSPQMDELNPEDSRITTPFDSDVTPTKT
SSATSDVTSPETSQAVAPRPSELFTPSSSGIGPDLGSTSPSGTTIQISLL
VSPLPPTPSASPFPGTITSGPISTTTPASVMVTPLPTIESSVTPDVPAST
PRNGERGEVTASLSASPIASLPEATPVSVLLLFSPTVTPEVIWPEASVTV
TVSPLNVLPTQTFAFTEEPTPPVVGSVILWTPSPDPTVPEPCSNLPSVVP
DSSLLAQTENFQRVRLSIQVAGPNMTNTCHLSDEIVQRFVNLSAMSTLSS
AHLWFITSIEDGPAVLADGSTLVVVEEEVGAIESTSPQHSASPEDVEELF
PGSIVFGVTAFLNPFSVELVEAAYLDYVRSQNIVRALRRSGHDEIHWTGI
VSEPVVVDKRRAPAVEVSSGVSGGYIAGIAFGTLLIVGAAVFIVAEAGRP
V*
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