Gcaud9990.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9990.t1
Unique NameGcaud9990.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length531
Homology
BLAST of Gcaud9990.t1 vs. uniprot
Match: A0A2V3IML1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IML1_9FLOR)

HSP 1 Score: 100 bits (250), Expect = 6.740e-20
Identity = 68/153 (44.44%), Postives = 96/153 (62.75%), Query Frame = 0
Query:  155 MFGDDYWRGIDIKGAKKISKETAEATKXXXXXXXXXXXXXXXXXXXXXXXXXEVRELERKGLWDEKTENKRRLEQSEKEWVAVDTPVPIFRQKNSAIARAAQSSSSA---SKPLPVSSAKPG---GALSTPLAKKTSFAQVKERARLFKERLM 301
            MFG+DY++G+D+  A+K +KE+AEATK           XX            + RELERKGL DE+T+  RR   S+K+WVAVDTP+PI  QKNSAI R A+++++A       P +S+K     G+ S  + K+ + A+V+ERAR FKER+M
Sbjct:    1 MFGEDYYKGLDLAFAEKAAKESAEATKEAQEIIAERKAXXERIKREAEENVRKERELERKGLLDEETKYARRRAVSDKDWVAVDTPIPIRLQKNSAIVRKARANAAAVPSGSSTPSASSKSAFKSGSTSASVQKRRTTAEVRERARRFKERIM 153          
BLAST of Gcaud9990.t1 vs. uniprot
Match: R7Q4T3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4T3_CHOCR)

HSP 1 Score: 82.0 bits (201), Expect = 1.900e-13
Identity = 52/133 (39.10%), Postives = 74/133 (55.64%), Query Frame = 0
Query:  131 MEFVVRREKKKKQIRVPHTYDYSDMFGDDYWRGIDIKGAKKISKETAEATKXXXXXXXXXXXXXXXXXXXXXXXXXEVRELERKGLWDEKTENKRRLEQSEKEWVAVDTPVPIFRQKNSAIARAAQSSSSASK 263
            M+FV RR+KKK +I VPHT DYSD+FGDDY  GID+K   K+ +E+A+A K                         E  E++R+G+ ++K  N  RL+ +EK+WVAVD P         A  +A+ SS+  S+
Sbjct:    1 MQFVERRDKKK-EINVPHTSDYSDLFGDDYLVGIDLKCVTKMKEESAKAAKEAEKIHAEHEAQRQKRLKEAEEIAREAAEMKRRGV-NQKETNVWRLKATEKDWVAVDIPTNALTPSERAHLKASSSSAQPSR 131          
The following BLAST results are available for this feature:
BLAST of Gcaud9990.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IML1_9FLOR6.740e-2044.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q4T3_CHOCR1.900e-1339.10Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 169..214
NoneNo IPR availableCOILSCoilCoilcoord: 10..60
NoneNo IPR availableCOILSCoilCoilcoord: 499..530
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 511..530
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..487
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 344..450
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..488

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_132_length_45408_cov_4.668756contigNODE_132_length_45408_cov_4.668756:18438..20030 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9990.t1Gcaud9990.t1Gracilaria caudata M_176_S67 malemRNANODE_132_length_45408_cov_4.668756 18438..20030 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9990.t1 ID=Gcaud9990.t1|Name=Gcaud9990.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=531bp
MGDDFTAQLLKGFERRADAAKKQVEERARRAAEQRQRLKKEQEQAEKDRL
AAEVDKMMARANQRVSAKRKKRKKKPVASSAAASSSSGATAKPPQPKKPV
PKHHVSEMRTNYRAPPKRTGPGRVPKLGPNMEFVVRREKKKKQIRVPHTY
DYSDMFGDDYWRGIDIKGAKKISKETAEATKEAQEIIAERKAKREESKRQ
MEETIREVRELERKGLWDEKTENKRRLEQSEKEWVAVDTPVPIFRQKNSA
IARAAQSSSSASKPLPVSSAKPGGALSTPLAKKTSFAQVKERARLFKERL
MGLNASSSKKPAPSKVSKSKNSSGSDSDIDRRHSSHNKRRTPLKRRVYDS
DDSEDEDERRGKKRRRRPSEDSDSDRAYRSAKRMRRARDYSDDSDSDHDH
KSRGVKRNRRARDDSDDSDSEYRRRSLKKSNRAREDSEESDVDRRGSRKS
YGSGKKNRSGRKGYNSDEWSNSDDDDDSDEEDCFDISALDREEARSERIA
KLEDKRELAKLRRDKKEKERRRREFEAEQA*
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