Gcaud9982.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9982.t2
Unique NameGcaud9982.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length961
Homology
BLAST of Gcaud9982.t2 vs. uniprot
Match: A0A2V3IYK8_9FLOR (E3 ubiquitin-protein ligase listerin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYK8_9FLOR)

HSP 1 Score: 991 bits (2563), Expect = 0.000e+0
Identity = 517/954 (54.19%), Postives = 682/954 (71.49%), Query Frame = 0
Query:    1 MGRKPGTRTASAAAAAANVGDVPTFTSFAAATAQALQGYSSVAATPAEQHEWDSIALQLLKKLSKRDATTKEKALKDLTEHLKTLPSESGVGTAFVTAWGESFRAAVQDPSPAVRIAALHLMANTVQAFRRAVQHIFPSVFPLWLSAQGDLNNAVSDVASSSLERVLPTGMHRKKVFSRYAEELKKHCDETISQIGSSNNFLSEAKRVIAILKWLLTASQTTSSIASIVDTEPYPLLLFAKGRKKKRESESALRDVCELAMFILSFMTRSSSEDEARAAQFADIAVYAIRKQETNGWDLTIVLLRDGWSASFGPRLDKLSAVVCESVASPVPTGVQALLPLFESLPHESVSGPFAEKVLGSMREYLHPSQRNKKRVQITVSYALTALLTYVQTASYSQRVLAGRWFSDDGE-VSAFAKRIFEEHVIPTCRLFVSGVLPPVTKQVSETATSRRRHNTGGSDKNITEISQALGLVLRVMGDSVSLQVISDIANGFGSSLSEHPPDERLRRFEYLVDAIDYQARENQLVEAGIMAIVKNNTIKPESAVKVLAALLSNKPGKRLAVSPNTNGSHG-KTLLSEIYKYCKSLLKPANTNKESIPNVSLTELARVFSWIYTSSACLDGGQIWSIVVTEMRSICSNETLYILMTETIFAQQQQRELFEDMGWIPVRGNDLDTMAIDTINQL-EQELSEAAIRFVRTAVDVGGGAKLSREAWEKVILRITEAVRKEEKNENMDPVTEAAIHSVLSELRFDDISQELVSVSVVRAVQNRSILTKVTSFIEAYPSEKMVTLLESIGGVLLHCLNEVEASQLAELASPISAIVAAFGRHGENLSNSLCSRLLVSPTPVFVSSLLRRTPLKFIFGDGVTQTVDIKFFNEIIDKICPESHEDVDVRLGAYLAELRGEERLSIGLNTTRLLLLNPRKGSVKIMTFLLKTTTESSSAEFTAISEELQRFW 951
            MGRKPG+R AS++AAAAN+ D PTFTSFAAATAQALQG SS A    EQ+ WD+ ALQLLKKLSKRD TTKEKAL DLTEHLKTLP + GVGTAFVTAWGE+FR AVQDP PAVR AAL LM++TV  FRRAVQHIFPS+ PLWLSAQGD+N  VS  A SSLERVLP+  HR + FSRYAE+L+K C+E ISQ+ SS+NFL +AKR+IA+LKWLL AS + SSI+ +VD EP+ LLLFAKGRKK+++SESA+RDVCELA ++LSFM +S   D  RA QFADIAV AIRK E++GWDLT+ LLRDGWSASFG  L KLS +VCE+VASP+PTG QALLPLFESLPH++ SGPFAEKVL SM+EYLHPS + KKR+QIT SYAL++LLTYVQTASY+ RVLA RW++++ E  SAF  ++F EHV+PTCRLF+SGVLPP+ KQ++E+ T RRR    GS K++ EISQA G +LRV+    + +VIS+I  GF S LSEH PDERLRRFEY+++AID + R+++ V  G+ A++K   I PE +VK +A L+S+KP +R  V+ +    HG +TLLSE  +YC SLLK      E +    +   A + SWIYTSS+C D G+IWS   +E+RS+CS E  Y LMTET+ AQ++ RE+ ED+GW P++G + + + ++ +  + + +L+ + +     +++  GGA LS E  +++I  +   ++ +    +MD + EA + +  S L      +E VSVS  RAV+N SIL  V S+I A+  E +  LL+++G VLL  +NE E S+LA+LAS +SA+++AFG+HG   S  L  +LL    P F S +L +TP + +FGDG+  ++D+++ N  I     +   +++  L  Y   L  +E   +G  TT+  L    +GS  ++  L +  TE S   FT ISEEL+R W
Sbjct:    1 MGRKPGSRKASSSAAAANLTDTPTFTSFAAATAQALQGCSSTAPPVLEQNAWDTTALQLLKKLSKRDTTTKEKALTDLTEHLKTLPQDPGVGTAFVTAWGEAFRGAVQDPHPAVRTAALLLMSDTVLCFRRAVQHIFPSILPLWLSAQGDVNATVSSAAKSSLERVLPSDAHRTRAFSRYAEDLRKFCEEQISQVSSSDNFLVDAKRIIAVLKWLLFASNSASSISPLVDNEPHALLLFAKGRKKRKDSESAIRDVCELATYMLSFMKQSEELDHTRAKQFADIAVDAIRKSESSGWDLTLTLLRDGWSASFGENLSKLSKIVCEAVASPIPTGTQALLPLFESLPHKNSSGPFAEKVLNSMKEYLHPSAKKKKRLQITASYALSSLLTYVQTASYTHRVLATRWYAENNEDSSAFGSKVFHEHVVPTCRLFLSGVLPPIAKQINESVTVRRRTTASGSGKHLVEISQAFGKILRVIPSDEASEVISNITLGFASGLSEHSPDERLRRFEYIMEAIDDKNRQSEYVYGGLSAVMKVKAISPEVSVKAIANLVSSKPARR-CVTSDCAVKHGFETLLSETTQYCASLLKQLYQEGEEMEQSRIKSFALIHSWIYTSSSCFDNGKIWSKAFSELRSMCSEELQYALMTETVLAQKKLREVHEDIGWTPIKGAEFEQLVLEVMQHIHDNKLTNSGVELACASMEPDGGAMLSSEIHDRIIGLVASVLQNDHSRSDMDRIVEAILSAFSSRLGSQVSFREFVSVSTFRAVRNASILPHVLSYITAHEYETLSFLLDTMGNVLLCSMNESEDSELAQLASAVSAVISAFGKHGIGASTFLAKKLLSVAKPAFTSGILHQTPFRLLFGDGIIVSIDVEYLNHTIRNTFVQRVAELESLLKDYFISLDADETQRVGRVTTQFFLSKTDEGSEAVLGCLSQAMTEISPELFTGISEELKRHW 953          
BLAST of Gcaud9982.t2 vs. uniprot
Match: A0A3M7NRK9_9EURO (E3 ubiquitin-protein ligase listerin (Fragment) n=1 Tax=Chaetothyriales sp. CBS 134916 TaxID=2249418 RepID=A0A3M7NRK9_9EURO)

HSP 1 Score: 67.0 bits (162), Expect = 1.890e-7
Identity = 52/173 (30.06%), Postives = 80/173 (46.24%), Query Frame = 0
Query:   34 QALQGYSSVAATPAEQHEWDSIALQLLKKLSKRDATTKEKALKDLTEHLKTLPSESGVGTAFVTAWGESFRAAVQDPSPAVRIAALHLMANTVQAFRRAVQHIFPSVFPLWLSAQGDLNNAVSDVASSSLERVLPTGMHRKKVFSRYAEELKKHCDETISQIGSSNNFLSEAK 206
            Q+    S VA  P      D   +  L+ LSK+D+TTK KA+++L  H++T PS   +  A + AW   +  A  D S  VR  A  L  +   A  + +     S    WLS   D +  V   A  +LE V PT   R  ++ +Y + L  H ++ I  +  + N LS+ +
Sbjct:   34 QSTSSLSYVAEQPDLSGVSDPHVVVSLRNLSKKDSTTKSKAIEELQAHVRTAPS---LDEAVIAAWIALYPHASIDTSRRVRQLAHTLQGSITLATTKRILPYLRSAIGPWLSGLFDNDRVVERAAKEALELVFPTPEKRHMLWKKYRDSLLSHAEDAI--LVQTANSLSDER 201          
BLAST of Gcaud9982.t2 vs. uniprot
Match: A0A5M9J7L2_MONFR (E3 ubiquitin-protein ligase listerin n=1 Tax=Monilinia fructicola TaxID=38448 RepID=A0A5M9J7L2_MONFR)

HSP 1 Score: 63.9 bits (154), Expect = 1.680e-6
Identity = 117/583 (20.07%), Postives = 234/583 (40.14%), Query Frame = 0
Query:   53 DSIALQLLKKLSKRDATTKEKALKDLTEHLKTLPSESG-VGTAFVTAWGESFRAAVQDPSPAVRIAALHLMANTVQAFRRAVQHIFPSVFPLWLSAQGDLNNAVSDVASSSLERVLPTGMHRKKVFSRYAEELKKHCDETISQIGSSNNFLSEAKRVI---AILKWLLTASQTTSSIASIVDT----------EPYPLLLFAKGRKK-----KRESESALRDVCELAMFILSFMTRSSSEDEARAAQFADIAVYAIRKQETNGWDLTIVLLR------DGWSASFGPR---LDKLSAVVCESVASPVPTGVQALLPLFESLPHESVSGPFAEKVLGSMREYLHPSQRNKKRVQITVSYALTALLTYVQTASYSQRVLAGRWFSDDGEVSAFAKRIFEEHVIPTCRLFVSGVLPPVTKQVSETATSRRRHNTGGSDKNITEISQALGLVLRVMGDSVSLQVISDIANGFGSSLSEHPPDERLRRFEYLVDAIDYQARENQLVEAGIMAIVKNNTIKPES-AVKVLAALLSNKPGKRLAVSPNTNGSHGKTLLSEIYKYCKSLLKPANTNKESIPNVSLTELARV 606
            D+  +   K LSK+D TTK KAL+DL   ++T P+E G    A + AW   +     D S  VR  +  +    +++ R+ ++   P +   WL+   D + AV+  A   L   L T       + R   E+  + +E +++   +   LS+ + V    A  K+    S + S + +++            E Y  ++F  G KK       E  SA +   +L +  L   T+   E+       A I+      Q T+   L   L +      + W++++  +    D L + + +      P   Q L  L   LP  SV    ++ +L    E+L   +++  + + T + A  A L Y +T++     L+G   ++  + S +   +FE ++ P+     S     + +  + ++T     +T G + N            R   D    ++  +      +S+ E   D    +   + +   + +  +   +   +A+ +N  ++P S  + +   ++ N+ GK  + +          LL    +Y   LL+ + +  E+I +   T L ++
Sbjct:   47 DANVVVSFKNLSKKDGTTKSKALEDLRTFIQTQPNEQGGAEEAILEAWVNVYPRVAIDNSRRVRELSHSIQYELLKSARKRMEKYIPKIVGSWLAGTYDRDRAVARSAIDGLTSFLDTDAKMNLFWKRCQNEILDYAEEALNETPHT---LSDERSVPIEDANEKYFRVNSASVSLLVNLLAKLSNDDILKYQERYEKVIF--GNKKLWTLSSCEDASARKSTDKLLVLCLEKQTQLV-ENNLETISRAFISKALRSSQSTSALQLLQTLQKLTTKFPEVWTSAYKGKHSATDDLKSFIRKGSQGSSPAYWQTLRALVAILPI-SVLPQESDSIL----EFLEAFRKSVNQREETKANASEAWLAYEETSNICIGYLSGSQQTEVVQKSIYP--VFEHYLHPS-----SNTSEWLIRSDTPSSTLSSFVSTLGKNANF-----------RQSLDDEWQRLAQEFITRIQTSMPEQSKDYSSSQDAVIAEGHRWFSLLSATFKLKDLAVDRNPLLQPSSNIIDIALQVVVNRNGKPYSAA---------ALLESALRYSPQLLETSPSTLEAIKSFMETHLPKL 591          
BLAST of Gcaud9982.t2 vs. uniprot
Match: A0A4Z1PB14_9PEZI (E3 ubiquitin-protein ligase listerin n=3 Tax=Venturia TaxID=5024 RepID=A0A4Z1PB14_9PEZI)

HSP 1 Score: 62.8 bits (151), Expect = 3.770e-6
Identity = 121/559 (21.65%), Postives = 215/559 (38.46%), Query Frame = 0
Query:   53 DSIALQLLKKLSKRDATTKEKALKDLTEHLKTLPSESGVGTAFVTAWGESFRAAVQDPSPAVRIAALHLMANT-VQAFRRAVQHIFPSVFPLWLSAQGDLNNAVSDVASSSLERVLPTGMHRKKVFSRYAEELKKHCDETISQIGSSNNFLSEAKRVI---AILKWLLTASQTTSSIASIVD----------TEPYPLLLFAKGRKKKRESE--SALRDVCELAMFIL-SFMTRSS----------------SEDEARAAQFADIAVYAIRKQETNGWDLTIVLLRDGWSASFGPRLDKLSAVVCESVASPVPTGVQALLPLFESLPHESVSGPF--AEKVLGSMREYLHPSQRNKKRVQITVSYALTALLTYVQTASYSQRVLAGRWFSDDGEVSAFAKRIFEEHVIPTCRLFVSGVLPPVTKQVSETATSRRRHNTGGSDKNITEISQALGLVLRVMGDSVSLQVISDI-------ANGFGSSLSE-HPPDERLRRFEYLVDA--IDYQARENQLVEAG-------------IMAIVKNNTIKPESAVKVLAALLSN 553
            D+  +   K LSKRD+TTK KAL+DL   L +  SE  +    + AW   +     D S  VR  + ++     V++ +R  +H+ P V   WL+   D + +VS  AS + E+V  T   R  ++  Y E +  HC + +     S   LS+ + V    A  K+    +     ++S++           +E Y  +L  K   +K  SE  +  R V +L   +L S  T+++                S+    A+++ +  V+ + + +++ W        D W+    P   +L   V             ++  LF  +P +++      AE +L S    LH     K   +   +Y +     YVQ A     +L     S+D         + +EHV+P    ++     PV +         R H      + +  +   +   LR      S +++ DI       +N +G S  E     ER      L+ A   D   +  ++ E+               + + KN   KP  A  V +A++ +
Sbjct:   53 DAHTVVAFKNLSKRDSTTKAKALEDLQTQLSS--SEQEIEDGVLEAWINIYPRTSIDNSKTVRQLSHNVQGQVCVKSGKRIAKHM-PRVVGAWLAGLFDNDKSVSKAASEAFEQVFATLDKRLALWKAYQEPILAHCQQVLD--NESAKTLSDERSVSQDEANAKYYRVVTAAVGLLSSLISHVKEEEVGKHSEQYIEILQDKRLWEKSLSEDPAVRRAVHKLLRSLLQSHHTKNTLDLETLSSVYLYKGLESDQNGSASEYLE-TVFKLTEFDSSVWT-------DKWAGK-KPAKSRLKHFVKRGSQGSTLAYWSSVSKLFTLIPKKALPTELTEAEDILKS----LHGGITKKDEPR---AYIMPGFQAYVQVAD----ILCVNLASEDQTA------LLKEHVLPLILQYIK----PVAEHTQWDIPGARAHQV---IQEVVRMKADIDTALRQEWSLFSSELVKDIKVSLPEQSNDYGKSQDELSKTGERYATILALIVAKQTDSSLKREEVEESDKPIETIAMEVVTEALQVCKNRNGKPYGAANVASAIIQS 573          
BLAST of Gcaud9982.t2 vs. uniprot
Match: A0A384K5G1_BOTFB (E3 ubiquitin-protein ligase listerin n=15 Tax=Sclerotiniaceae TaxID=28983 RepID=A0A384K5G1_BOTFB)

HSP 1 Score: 62.4 bits (150), Expect = 4.930e-6
Identity = 46/158 (29.11%), Postives = 78/158 (49.37%), Query Frame = 0
Query:   53 DSIALQLLKKLSKRDATTKEKALKDLTEHLKTLPSESGVGT--AFVTAWGESFRAAVQDPSPAVRIAALHLMANTVQAFRRAVQHIFPSVFPLWLSAQGDLNNAVSDVASSSLERVLPTGMHRKKVFSRYAEELKKHCDETISQIGSSNNFLSEAKRV 208
            D+  +   K LSK+DATTK KAL+DL   ++  P+E G GT  A + AW +++     D S  VR  +  +    +++ R+ ++   P V   WL+   D + AV+  A   L   L T       + R   E+  + +E +++   + N LS+ + V
Sbjct:   48 DANVILSFKNLSKKDATTKSKALEDLRTFVQNQPNEQG-GTEEAILEAWVDAYPRISIDNSRRVRELSHSIQYELLKSARKRMERYIPKVVGSWLAGTYDRDRAVARSAMDGLTSFLDTDAKMNLFWKRCQNEILDYAEEALNE---TPNTLSDERSV 201          
BLAST of Gcaud9982.t2 vs. uniprot
Match: UPI000C1D0FE8 (E3 ubiquitin-protein ligase listerin n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D0FE8)

HSP 1 Score: 62.0 bits (149), Expect = 6.630e-6
Identity = 56/173 (32.37%), Postives = 79/173 (45.66%), Query Frame = 0
Query:   31 ATAQALQGY-------SSVAATPAEQ---HEWDSIALQLLKKLSKRDATTKEKALKDLTEHLKTLPSESGVGTAFVTAWGESFRAAVQDPSPAVRIAALHLMANTVQAFRRAVQ-HIFPSVFPLWLSAQGDLNNAVSDVASSSLERVLPTGMHRKKVFSRYAEELKKHCDETI 192
            ATA    GY       SS+A+TP      ++ D    Q LK+LS++D TTK KAL  L++HLK   ++  V    +  W   +R  + D +  VR A    M N V A  R +  H+ P + P W S Q D    VS  A  S +   P    R      YA E+  + +E +
Sbjct:   29 ATAVGFGGYVGSSRVDSSLASTPEASSFMNDLDGEMAQHLKRLSRKDPTTKLKALTSLSQHLKQKTAKEIV--PIIPQWAFEYRKLLLDYNREVRRATHDTMTNLVDAVGRDLAPHLKPLIGPWWFS-QFDSVYEVSQTAKRSFQTAFPAQEKRLDALMLYAAEIFLYIEENL 198          
The following BLAST results are available for this feature:
BLAST of Gcaud9982.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IYK8_9FLOR0.000e+054.19E3 ubiquitin-protein ligase listerin n=1 Tax=Graci... [more]
A0A3M7NRK9_9EURO1.890e-730.06E3 ubiquitin-protein ligase listerin (Fragment) n=... [more]
A0A5M9J7L2_MONFR1.680e-620.07E3 ubiquitin-protein ligase listerin n=1 Tax=Monil... [more]
A0A4Z1PB14_9PEZI3.770e-621.65E3 ubiquitin-protein ligase listerin n=3 Tax=Ventu... [more]
A0A384K5G1_BOTFB4.930e-629.11E3 ubiquitin-protein ligase listerin n=15 Tax=Scle... [more]
UPI000C1D0FE86.630e-632.37E3 ubiquitin-protein ligase listerin n=1 Tax=Olea ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 57..235
e-value: 2.0E-9
score: 39.9
NoneNo IPR availablePANTHERPTHR12389:SF0E3 UBIQUITIN-PROTEIN LIGASE LISTERINcoord: 8..779
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..960
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..35
IPR039795E3 ubiquitin-protein ligase listerinPANTHERPTHR12389ZINC FINGER PROTEIN 294coord: 8..779
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 55..834

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_473_length_24485_cov_4.886325contigNODE_473_length_24485_cov_4.886325:16694..19644 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9982.t2Gcaud9982.t2Gracilaria caudata M_176_S67 malemRNANODE_473_length_24485_cov_4.886325 16694..19644 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9982.t2 ID=Gcaud9982.t2|Name=Gcaud9982.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=961bp
MGRKPGTRTASAAAAAANVGDVPTFTSFAAATAQALQGYSSVAATPAEQH
EWDSIALQLLKKLSKRDATTKEKALKDLTEHLKTLPSESGVGTAFVTAWG
ESFRAAVQDPSPAVRIAALHLMANTVQAFRRAVQHIFPSVFPLWLSAQGD
LNNAVSDVASSSLERVLPTGMHRKKVFSRYAEELKKHCDETISQIGSSNN
FLSEAKRVIAILKWLLTASQTTSSIASIVDTEPYPLLLFAKGRKKKRESE
SALRDVCELAMFILSFMTRSSSEDEARAAQFADIAVYAIRKQETNGWDLT
IVLLRDGWSASFGPRLDKLSAVVCESVASPVPTGVQALLPLFESLPHESV
SGPFAEKVLGSMREYLHPSQRNKKRVQITVSYALTALLTYVQTASYSQRV
LAGRWFSDDGEVSAFAKRIFEEHVIPTCRLFVSGVLPPVTKQVSETATSR
RRHNTGGSDKNITEISQALGLVLRVMGDSVSLQVISDIANGFGSSLSEHP
PDERLRRFEYLVDAIDYQARENQLVEAGIMAIVKNNTIKPESAVKVLAAL
LSNKPGKRLAVSPNTNGSHGKTLLSEIYKYCKSLLKPANTNKESIPNVSL
TELARVFSWIYTSSACLDGGQIWSIVVTEMRSICSNETLYILMTETIFAQ
QQQRELFEDMGWIPVRGNDLDTMAIDTINQLEQELSEAAIRFVRTAVDVG
GGAKLSREAWEKVILRITEAVRKEEKNENMDPVTEAAIHSVLSELRFDDI
SQELVSVSVVRAVQNRSILTKVTSFIEAYPSEKMVTLLESIGGVLLHCLN
EVEASQLAELASPISAIVAAFGRHGENLSNSLCSRLLVSPTPVFVSSLLR
RTPLKFIFGDGVTQTVDIKFFNEIIDKICPESHEDVDVRLGAYLAELRGE
ERLSIGLNTTRLLLLNPRKGSVKIMTFLLKTTTESSSAEFTAISEELQRF
WLDEESWEVY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR039795LTN1/Rkr1
IPR016024ARM-type_fold