Gcaud9974.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9974.t1
Unique NameGcaud9974.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length119
Homology
BLAST of Gcaud9974.t1 vs. uniprot
Match: A0A2V3J2J8_9FLOR (ATP-dependent Clp protease adapter protein CLPS1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2J8_9FLOR)

HSP 1 Score: 214 bits (545), Expect = 9.870e-70
Identity = 102/117 (87.18%), Postives = 111/117 (94.87%), Query Frame = 0
Query:    1 MAALDAPVKEDLRTKFNNLLAQTPSTTPTTESSRVKQKIDPGKYYKVLIFNDEMHSKDYVTKVLLKVIPGLSPDAAWAIMNKAHTNGKAVVGVWIFEISEGYCDMLRSNGLRSDIEE 117
            M ALDAPVKEDLRTK NNLLAQTP+ TP TES+ VKQKIDPGK+YKVLIFNDEMH+KDYVTKVLLKV+PGL+P+AA+AIM KAHTNGKAVVGVWIFEISEGYCDMLR+NGLRSDIEE
Sbjct:   29 MGALDAPVKEDLRTKLNNLLAQTPTATPETESTSVKQKIDPGKFYKVLIFNDEMHTKDYVTKVLLKVVPGLTPEAAYAIMQKAHTNGKAVVGVWIFEISEGYCDMLRNNGLRSDIEE 145          
BLAST of Gcaud9974.t1 vs. uniprot
Match: M2XUB6_GALSU (ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XUB6_GALSU)

HSP 1 Score: 114 bits (285), Expect = 5.640e-30
Identity = 54/84 (64.29%), Postives = 64/84 (76.19%), Query Frame = 0
Query:   33 SRVKQKIDPGKYYKVLIFNDEMHSKDYVTKVLLKVIPGLSPDAAWAIMNKAHTNGKAVVGVWIFEISEGYCDMLRSNGLRSDIE 116
            S  K + DPGK YKVL+FNDE H+K YV + LL+VIPG++ D A  I+  AHT G AVVGVWIFE++E YCD LRSNGL SDIE
Sbjct:   77 SESKTQGDPGKPYKVLLFNDETHTKQYVLETLLRVIPGMTQDQAVGIVETAHTTGSAVVGVWIFELAEAYCDGLRSNGLGSDIE 160          
BLAST of Gcaud9974.t1 vs. uniprot
Match: A0A7J7IJQ4_9RHOD (ClpS domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJQ4_9RHOD)

HSP 1 Score: 111 bits (278), Expect = 1.140e-28
Identity = 50/88 (56.82%), Postives = 68/88 (77.27%), Query Frame = 0
Query:   31 ESSRVKQKIDPGKYYKVLIFNDEMHSKDYVTKVLLKVIPGLSPDAAWAIMNKAHTNGKAVVGVWIFEISEGYCDMLRSNGLRSDIEEA 118
            E +   + +DPGK YK+L+FND++++++ V  VLLK IPGLS   A +IM KAHT GKA+VG+W+FE++E YCD+LRS GL SDIE A
Sbjct:   96 EKTTATKGVDPGKKYKLLLFNDQVNTRERVVNVLLKCIPGLSKTDAHSIMQKAHTAGKALVGIWVFELAEAYCDLLRSEGLVSDIEPA 183          
BLAST of Gcaud9974.t1 vs. uniprot
Match: M1VIM3_CYAM1 (ClpS domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VIM3_CYAM1)

HSP 1 Score: 110 bits (274), Expect = 4.930e-28
Identity = 57/107 (53.27%), Postives = 74/107 (69.16%), Query Frame = 0
Query:   24 PSTTPT------TESSRVKQK------IDPGKYYKVLIFNDEMHSKDYVTKVLLKVIPGLSPDAAWAIMNKAHTNGKAVVGVWIFEISEGYCDMLRSNGLRSDIEEA 118
            PS +PT       E   V++K      +DPGK YK+L+FNDE ++++ V +VLLK IPGLS   A +IM KAHT G A+VGVW+FE++E YCD+LRS GL SDIE A
Sbjct:   80 PSFSPTGGGATTLEREAVREKTTATKGVDPGKKYKLLLFNDEKNTRERVVEVLLKCIPGLSKLDAQSIMQKAHTTGMALVGVWVFELAEAYCDLLRSEGLVSDIEPA 186          
BLAST of Gcaud9974.t1 vs. uniprot
Match: A0A7S0ZF67_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZF67_9RHOD)

HSP 1 Score: 106 bits (264), Expect = 7.550e-27
Identity = 48/91 (52.75%), Postives = 61/91 (67.03%), Query Frame = 0
Query:   28 PTTESSRVKQKIDPGKYYKVLIFNDEMHSKDYVTKVLLKVIPGLSPDAAWAIMNKAHTNGKAVVGVWIFEISEGYCDMLRSNGLRSDIEEA 118
            P  E      K DPGK YKV I+NDE HSK YV   L+++IP ++ D A   M  AH  G A+VGVWIFE++E YCDMLR+ G++SDI +A
Sbjct:   69 PVVEEQVKSPKTDPGKMYKVFIYNDEKHSKSYVVSTLMRIIPDMTKDRATQAMEIAHKEGSAMVGVWIFEVAEMYCDMLRTAGIQSDIIQA 159          
BLAST of Gcaud9974.t1 vs. uniprot
Match: A0A6U4V643_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4V643_HEMAN)

HSP 1 Score: 100 bits (250), Expect = 2.900e-24
Identity = 42/82 (51.22%), Postives = 64/82 (78.05%), Query Frame = 0
Query:   36 KQKIDPGKYYKVLIFNDEMHSKDYVTKVLLKVIPGLSPDAAWAIMNKAHTNGKAVVGVWIFEISEGYCDMLRSNGLRSDIEE 117
            + ++DPGK YKVL+FND+ +++++V   L+KVIPG++ D A  I  +AH NG AVVG+W++E++E Y D+L S GLRS++EE
Sbjct:  120 RPRLDPGKKYKVLLFNDDKNTREFVIDTLIKVIPGMTGDRAKLITAEAHNNGMAVVGIWMYELAEAYSDLLNSAGLRSEVEE 201          
BLAST of Gcaud9974.t1 vs. uniprot
Match: A0A7S1TEG0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TEG0_9RHOD)

HSP 1 Score: 98.2 bits (243), Expect = 7.690e-24
Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 0
Query:   24 PSTTPTTESSRVKQKIDPGKYYKVLIFNDEMHSKDYVTKVLLKVIPGLSPDAAWAIMNKAHTNGKAVVGVWIFEISEGYCDMLRSNGLRSDIE 116
            P      + S+ K++   G  YKVLI ND  +S +YV   LL++IPG++ + AW +M +AH NG AVVGVW+FE++E YCD ++S G+ S IE
Sbjct:   51 PQKEKVQKESKEKKRSHGGGKYKVLILNDAFNSMEYVAATLLRLIPGMTTELAWKVMKEAHENGAAVVGVWVFELAEAYCDAIQSAGIGSRIE 143          
BLAST of Gcaud9974.t1 vs. uniprot
Match: A0A7S0G0I4_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G0I4_9RHOD)

HSP 1 Score: 96.7 bits (239), Expect = 2.240e-23
Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 0
Query:   25 STTPTTESSRVKQKIDPGKYYKVLIFNDEMHSKDYVTKVLLKVIPGLSPDAAWAIMNKAHTNGKAVVGVWIFEISEGYCDMLRSNGLRSDIE 116
            ST     +   K KIDPGK YKV++F +   ++D++ +VL+K +PG+  + A  I +KA   GKAVVG WIFE++E YCD LRS+GL +DI+
Sbjct:   40 STVLERPTQTQKGKIDPGKRYKVIVFGENGQTRDFIAQVLMKCLPGMREETAKEIADKAKKAGKAVVGAWIFEMAEAYCDSLRSSGLVADIQ 131          
BLAST of Gcaud9974.t1 vs. uniprot
Match: L1IIF5_GUITC (ClpS domain-containing protein n=4 Tax=Guillardia theta TaxID=55529 RepID=L1IIF5_GUITC)

HSP 1 Score: 98.2 bits (243), Expect = 7.470e-23
Identity = 45/88 (51.14%), Postives = 60/88 (68.18%), Query Frame = 0
Query:   29 TTESSRVKQKIDPGKYYKVLIFNDEMHSKDYVTKVLLKVIPGLSPDAAWAIMNKAHTNGKAVVGVWIFEISEGYCDMLRSNGLRSDIE 116
            T    R   K DPGK YKVL+FND+ +++ YV   L+K IPG++ D A  I   AH  G A+VGVW++E++E Y D+LRS GLRSDI+
Sbjct:  151 TAVMDRPSDKTDPGKKYKVLLFNDDKNTRQYVIDTLMKYIPGMTADKAKEITVAAHNTGMAIVGVWMYEMAEAYSDVLRSAGLRSDID 238          
BLAST of Gcaud9974.t1 vs. uniprot
Match: A0A7S0LZ74_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LZ74_9CRYP)

HSP 1 Score: 96.3 bits (238), Expect = 9.500e-23
Identity = 42/89 (47.19%), Postives = 62/89 (69.66%), Query Frame = 0
Query:   29 TTESSRVKQKIDPGKYYKVLIFNDEMHSKDYVTKVLLKVIPGLSPDAAWAIMNKAHTNGKAVVGVWIFEISEGYCDMLRSNGLRSDIEE 117
            T    R  Q+ DPGK YKVL+FNDE ++K++V + L+K IPG++ + A  +  +AH  G  +VG+W+ E++E Y D+LR+ GLRSDI E
Sbjct:   86 TAVLERPTQRTDPGKKYKVLLFNDEKNTKEFVIQTLVKFIPGMTAEKAKQVTLEAHQTGTGIVGIWMLELAEAYSDVLRTQGLRSDIAE 174          
The following BLAST results are available for this feature:
BLAST of Gcaud9974.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2J8_9FLOR9.870e-7087.18ATP-dependent Clp protease adapter protein CLPS1, ... [more]
M2XUB6_GALSU5.640e-3064.29ATP-dependent Clp protease adaptor protein ClpS n=... [more]
A0A7J7IJQ4_9RHOD1.140e-2856.82ClpS domain-containing protein n=1 Tax=Cyanidiococ... [more]
M1VIM3_CYAM14.930e-2853.27ClpS domain-containing protein n=1 Tax=Cyanidiosch... [more]
A0A7S0ZF67_9RHOD7.550e-2752.75Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A6U4V643_HEMAN2.900e-2451.22Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7S1TEG0_9RHOD7.690e-2446.24Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0G0I4_9RHOD2.240e-2347.83Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
L1IIF5_GUITC7.470e-2351.14ClpS domain-containing protein n=4 Tax=Guillardia ... [more]
A0A7S0LZ74_9CRYP9.500e-2347.19Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 21..118
e-value: 9.8E-20
score: 72.1
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 38..116
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 43..108
e-value: 4.8E-16
score: 58.3
IPR022935ATP-dependent Clp protease adaptor protein ClpSPANTHERPTHR33473ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTICcoord: 24..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_502_length_23533_cov_4.649518contigNODE_502_length_23533_cov_4.649518:17856..18212 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9974.t1Gcaud9974.t1Gracilaria caudata M_176_S67 malemRNANODE_502_length_23533_cov_4.649518 17856..18212 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9974.t1 ID=Gcaud9974.t1|Name=Gcaud9974.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=119bp
MAALDAPVKEDLRTKFNNLLAQTPSTTPTTESSRVKQKIDPGKYYKVLIF
NDEMHSKDYVTKVLLKVIPGLSPDAAWAIMNKAHTNGKAVVGVWIFEISE
GYCDMLRSNGLRSDIEEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014719Ribosomal_L7/12_C/ClpS-like
IPR003769ClpS_core
IPR022935ClpS