Gcaud9973.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9973.t1
Unique NameGcaud9973.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length222
Homology
BLAST of Gcaud9973.t1 vs. uniprot
Match: A0A2V3J375_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J375_9FLOR)

HSP 1 Score: 246 bits (627), Expect = 3.450e-80
Identity = 119/165 (72.12%), Postives = 142/165 (86.06%), Query Frame = 0
Query:   58 MPQICTGASSTNNCDTSTPTKPMVIAAVDAIRDLLDRGRETASTIS-PSVSARERRRLQLAESYIQLRMAGNNEKLLNLVSEDIELQSSRDGTFVGKQQFESYLSKVKPTGTWQNATWNNAIDRAEILGNVRILMVNVGVVANMGFDKSGKINRIYVGTRSRSPK 221
            MP++CTG +S+++CDT+ PTKP+   A+DA R  LDRG+E A T+S P  ++RERRRLQ AESYIQ+RMAGNNEKLLNLVS+DI+L SSRDGTFVGK QF  YL KVKPTGTW+NATWN+ IDRA+ILG V+ L+VNVGVVA+MGFDKS KINRIYVGTRS+SPK
Sbjct:    1 MPRVCTGIASSSDCDTAKPTKPIAAVAMDAFRQFLDRGKEAAQTVSAPMTTSRERRRLQAAESYIQMRMAGNNEKLLNLVSDDIQLLSSRDGTFVGKDQFSDYLDKVKPTGTWENATWNDDIDRAQILGRVKFLVVNVGVVAHMGFDKSDKINRIYVGTRSKSPK 165          
BLAST of Gcaud9973.t1 vs. uniprot
Match: G5AAI7_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G5AAI7_PHYSP)

HSP 1 Score: 72.4 bits (176), Expect = 6.900e-13
Identity = 36/96 (37.50%), Postives = 56/96 (58.33%), Query Frame = 0
Query:  118 ESYIQLRMAGNNEKLLNLVSEDIELQSSRDGTFVGKQQFESYLSKVKPTGTWQNATWNNAIDRAEIL-GNVRILMVNVGVVANMGFDKSGKINRIY 212
            + Y+ LR+    ++ L LVS+DI+  S RDG++ GK++F  YL K K  GTWQ     +  D   ++ G V+I  V V V +   FD +G+I+ I+
Sbjct:   16 KQYVALRLEKRTKETLQLVSDDIQFYSQRDGSYRGKEEFRVYLEKTKVEGTWQPPAIEDGDDEHVVVRGVVKIFFVPVSVKSTFAFDDAGRISSIH 111          
BLAST of Gcaud9973.t1 vs. uniprot
Match: A0A662XNU3_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XNU3_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 5.180e-12
Identity = 35/98 (35.71%), Postives = 55/98 (56.12%), Query Frame = 0
Query:  118 ESYIQLRMAGNNEKLLNLVSEDIELQSSRDGTFVGKQQFESYLSKVKPTGTWQN-ATWNNAIDRAEILGNVRILMVNVGVVANMGFDKSGKINRIYVG 214
            + Y+ LR+    ++ L LVS DI+  S RDG++ GK +F  YL K K  GTW+  A  +N ++   + G V+I  + + V +   FD  G+I  I+ G
Sbjct:   16 KEYVALRLEKRIKETLELVSNDIQFYSQRDGSYNGKDEFTVYLEKTKIEGTWEPPAIEDNDLEHVIVRGVVKIFYIPISVKSTFSFDDDGRICNIHTG 113          
BLAST of Gcaud9973.t1 vs. uniprot
Match: A0A5D6Y8H9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8H9_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.470e-10
Identity = 35/102 (34.31%), Postives = 56/102 (54.90%), Query Frame = 0
Query:  114 LQLAESYIQLRMAGNNEKLLNLVSEDIELQSSRDGTFVGKQQFESYLSKVKPTGTWQN-ATWNNAIDRAEILGNVRILMVNVGVVANMGFDKSGKINRIYVG 214
            +++ + Y+ LR+A +    L LVS+DIE  S RDG++ GK+ F  YL K K  GTW+  A  ++      + G V+I  + + V +   F  +G I  I+ G
Sbjct:   12 VEIVKKYVALRLAKDISATLELVSDDIEFYSQRDGSYKGKKAFTEYLEKTKIEGTWEPPAIEDDDTQHVIVRGVVKIFYIPISVKSTFLFTDAGLICNIHTG 113          
BLAST of Gcaud9973.t1 vs. uniprot
Match: A0A8J5LYH7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5LYH7_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.530e-8
Identity = 32/104 (30.77%), Postives = 55/104 (52.88%), Query Frame = 0
Query:  118 ESYIQLRMAGNNEKLLNLVSEDIELQSSRDGTFVGKQQFESYLSKVKPTGTWQNATWNNAIDRAEIL-GNVRILMVNVGVVANMGFDKSGKINRIYVGTRSRSP 220
            + Y++LR+    ++ L LVS+DI+  S RDG++ GK+QF  YL K K  G W+     +  D   ++ G V++  + + V +   F+  G I  I+      +P
Sbjct:   16 KQYVKLRLEKRTKETLQLVSDDIQFYSQRDGSYQGKEQFRVYLEKTKIEGKWEPPAIEDGDDEHVVVRGVVKVFYIPISVKSTFSFNDEGCICNIHTSKAPFAP 119          
The following BLAST results are available for this feature:
BLAST of Gcaud9973.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J375_9FLOR3.450e-8072.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
G5AAI7_PHYSP6.900e-1337.50Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A662XNU3_9STRA5.180e-1235.71Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A5D6Y8H9_9STRA1.470e-1034.31Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8J5LYH7_9STRA1.530e-830.77Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 112..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_502_length_23533_cov_4.649518contigNODE_502_length_23533_cov_4.649518:16602..17349 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9973.t1Gcaud9973.t1Gracilaria caudata M_176_S67 malemRNANODE_502_length_23533_cov_4.649518 16602..17349 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9973.t1 ID=Gcaud9973.t1|Name=Gcaud9973.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=222bp
MRRKQREAEHARHHSFAIAHHPPLESVPLMNILHSAKHIQPKLEGRTSFE
RYSIFITMPQICTGASSTNNCDTSTPTKPMVIAAVDAIRDLLDRGRETAS
TISPSVSARERRRLQLAESYIQLRMAGNNEKLLNLVSEDIELQSSRDGTF
VGKQQFESYLSKVKPTGTWQNATWNNAIDRAEILGNVRILMVNVGVVANM
GFDKSGKINRIYVGTRSRSPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032710NTF2-like_dom_sf