Gcaud9970.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9970.t1
Unique NameGcaud9970.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length572
Homology
BLAST of Gcaud9970.t1 vs. uniprot
Match: A0A2V3J2C9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2C9_9FLOR)

HSP 1 Score: 306 bits (783), Expect = 3.730e-93
Identity = 193/526 (36.69%), Postives = 287/526 (54.56%), Query Frame = 0
Query:   37 QEEIALISLEVLKTEDKAILEKSRKIIELRCLQLFKYGKDHKHIETYRTIIDGFLSLVNINSSLKKLLLSCCLLLSCCSIARWTEFLRSGVLSLHPEIGILVAEAMVCENPVWTVWEHQDLLLIAHTLMDLSLLSHYEETGHMSTTTLTTPLNVAISTCLSYASKPEMGLSQYMGM-LLHKIADRTIPEAWESVRDEALSAILKFLPQESS----VSNRVRLLFNVRISWYSQARQKFSKSGSIGPETALENWTEKETSFVPKPLYSTGSEINNFECIKFVADAYTLAKRWNQGGDTDEIDSAVKAWVGKQHPELVAAAYVAAPNLLRLRVEENPVTRYHVENLPKGVFSDLDVSIDADLAGLLESIPEIAEVYGVKTNPNRRHQYRRLRRAAILYPLLMLRRTDCFCAAGRVILFGLSTPSQRYSEDALEVMALLLGVVSELPYTSSIFRGTISAFIVQAFLFLVEEGRLSNGIPKRLETIAIQVMKNISLCTRDDVERKIVGLIPRVIESNKQNEALLFHLRNV 557
            +++IA I L+ L+ +D   LE+S   +E  C  L + G+  K   +YR ++DG L LV+++ SL   L SC +LLS  S+  WT F R+G+L  H E+  L+A+     NPVW  W  +D  L+A +LMDLS ++ YEE  H+  T   TP+++A+S C++ ASK        M   LLH I  R    AWES++ E L   L  LP+ S+    +  R+ L+   R+            S ++ P+T     T    S  P    + G+E ++   I   ++AY+  K   +  D + I SA   W+    P LVAAAYVAAP  LRL VE++     H+E++P    S LD+ ID  L GLL  + EIA+VYGV  N   +  ++ L+R +IL+P LMLRR D  CAAGR IL GLSTPSQ   + A++V+  L  + S LP      +  +S F ++   FL ++ RL +GIPK+ E +A  V K I     +DV  ++  L+  +  +N+ NE L+  +RN+
Sbjct:   43 EDQIAGIILKALQNKDSQALEQSWSTVERGCFGLVQTGRRVKATISYRPLLDGLLRLVDVSPSLSSQLYSCVVLLSSYSVKVWTAFTRAGILDSHAEVQDLIAKTAARMNPVWGHWSVEDQALVADSLMDLSNINKYEE-NHLLWTPPITPISIAVSRCIALASKSMTDDDLRMPTTLLHNIVLRCPSWAWESLQTEDLLCALNLLPESSTPREEIKKRMLLMPAKRLCMAPVIEASSPSSSTLKPKTEGARCTN--LSLEPG---TAGTEASSPASIVSPSEAYSFVKTLERKNDGNAIHSATHTWLRLNKPNLVAAAYVAAPQKLRLEVEQHTEVHSHIESVPNHFVSGLDLQIDEHLVGLLGFVQEIADVYGVNRNFGHQSHFQFLKRVSILHPRLMLRRIDSACAAGRTILDGLSTPSQVLDDAAIKVLEYLFDITSGLPSGDPNSKKDVSDFTIKTLAFLTDDTRLPDGIPKQFEALARLVFKAIESYIEEDVIPRVQTLLQSLANANRGNEILMSDVRNL 562          
The following BLAST results are available for this feature:
BLAST of Gcaud9970.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J2C9_9FLOR3.730e-9336.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 33..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_502_length_23533_cov_4.649518contigNODE_502_length_23533_cov_4.649518:6034..7749 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9970.t1Gcaud9970.t1Gracilaria caudata M_176_S67 malemRNANODE_502_length_23533_cov_4.649518 6034..7749 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9970.t1 ID=Gcaud9970.t1|Name=Gcaud9970.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=572bp
MVSQERSASNLSRPACTSGMTDNSNTHFSHSEAQNAQEEIALISLEVLKT
EDKAILEKSRKIIELRCLQLFKYGKDHKHIETYRTIIDGFLSLVNINSSL
KKLLLSCCLLLSCCSIARWTEFLRSGVLSLHPEIGILVAEAMVCENPVWT
VWEHQDLLLIAHTLMDLSLLSHYEETGHMSTTTLTTPLNVAISTCLSYAS
KPEMGLSQYMGMLLHKIADRTIPEAWESVRDEALSAILKFLPQESSVSNR
VRLLFNVRISWYSQARQKFSKSGSIGPETALENWTEKETSFVPKPLYSTG
SEINNFECIKFVADAYTLAKRWNQGGDTDEIDSAVKAWVGKQHPELVAAA
YVAAPNLLRLRVEENPVTRYHVENLPKGVFSDLDVSIDADLAGLLESIPE
IAEVYGVKTNPNRRHQYRRLRRAAILYPLLMLRRTDCFCAAGRVILFGLS
TPSQRYSEDALEVMALLLGVVSELPYTSSIFRGTISAFIVQAFLFLVEEG
RLSNGIPKRLETIAIQVMKNISLCTRDDVERKIVGLIPRVIESNKQNEAL
LFHLRNVQESLKSRVAAQPLQ*
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