Gcaud9961.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9961.t1
Unique NameGcaud9961.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length115
Homology
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BLAST of Gcaud9961.t1 vs. uniprot
Match: A0A2V3J017_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J017_9FLOR)

HSP 1 Score: 105 bits (263), Expect = 3.210e-24
Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = 0 
Query:    2 PKTAPPVLSEVPFDMAFYILKVAAAANKSITTTIHMPSSIALTLTITVKKIGEKFLHLYADMVPDAPKSLPSPSXXXXXXXXXXXXXXXXXXALERLRQNVRDKQRCLDILE 113
            P   P V+SE+ FDMA YILK+A +A KSI TT++MP+SIAL LT++VK+IG+KFLHLYA+++P+ P+S P  S                  ALER+RQ VRDKQ+ LD LE
Sbjct:   75 PSAPPIVVSELAFDMAAYILKIALSATKSINTTVNMPTSIALALTVSVKEIGDKFLHLYANLLPNLPQSPPQLSSAGNTASSDMDEAAAAL-ALERIRQQVRDKQQRLDSLE 185
The following BLAST results are available for this feature:
BLAST of Gcaud9961.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J017_9FLOR3.210e-2452.68Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_556_length_22202_cov_4.379087contigNODE_556_length_22202_cov_4.379087:21682..22026 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9961.t1Gcaud9961.t1Gracilaria caudata M_176_S67 malemRNANODE_556_length_22202_cov_4.379087 21682..22026 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9961.t1 ID=Gcaud9961.t1|Name=Gcaud9961.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=115bp
MPKTAPPVLSEVPFDMAFYILKVAAAANKSITTTIHMPSSIALTLTITVK
KIGEKFLHLYADMVPDAPKSLPSPSTNNTNTSSTDMDEAAAALALERLRQ
NVRDKQRCLDILEQ*
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