Gcaud9959.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9959.t1
Unique NameGcaud9959.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length171
Homology
BLAST of Gcaud9959.t1 vs. uniprot
Match: A0A2V3IQQ4_9FLOR (Mitotic spindle-associated MMXD complex subunit MIP18 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQQ4_9FLOR)

HSP 1 Score: 237 bits (605), Expect = 9.160e-78
Identity = 109/156 (69.87%), Postives = 134/156 (85.90%), Query Frame = 0
Query:   15 DNPNPEVKVLRRETRDPSERLTLKEHVFEIIRDIRDPEYPHSLEELGVLKLEYVDVANPPTDSPGYGTVSIQFHPTVPHCSLASMIGLSIQSKLKESTVLEPKGEHYYKLKVICIEGTHNNFRDINKQLADKERVSAAFENPKIMRLLRECTENLP 170
            DNPNPEVKVL RE R+P + LTL++ VFEIIRDIRDPE+PHSLEEL V+ L  +++ NPP DSPG+G + + F PTVPHCSLAS+IGLSIQSK++ES +L PKGEHYYKLKV C++GTH +  +INKQL DKERVSAAFENPKI+++LRECT++LP
Sbjct:    5 DNPNPEVKVLSRERREPGKPLTLQQRVFEIIRDIRDPEHPHSLEELSVVDLNCINITNPPDDSPGHGKIWVSFTPTVPHCSLASIIGLSIQSKIRESGILNPKGEHYYKLKVTCVDGTHTSAGEINKQLGDKERVSAAFENPKILKVLRECTDHLP 160          
BLAST of Gcaud9959.t1 vs. uniprot
Match: A0A0R3UA17_MESCO (FeS_assembly_P domain-containing protein n=1 Tax=Mesocestoides corti TaxID=53468 RepID=A0A0R3UA17_MESCO)

HSP 1 Score: 120 bits (301), Expect = 1.140e-31
Identity = 69/146 (47.26%), Postives = 97/146 (66.44%), Query Frame = 0
Query:   20 EVKVLRRETRDPSERLTLKEHVFEIIRDIRDPEYPHSLEELGVLKLEYVDVANPPTDSPGYGTVSIQFHPTVPHCSLASMIGLSIQSKLKESTVLEPKGEHYYKLKVICIEGTHNNFRDINKQLADKERVSAAFENPKIMRLLREC 165
            E K     TR+P   +T  E VFE IRDIRDPE+PH+LE LGV++ +++ V     D  G   VS+   PT+PHC++A++IGLS++ KL+ S    P+    +K+ V+   G+HN   DINKQLADKERV+AA ENP +MR++ +C
Sbjct:   22 EFKPRSSTTREP---ITAAE-VFEHIRDIRDPEHPHTLEALGVVQEDHITV-----DDAG-SAVSVLITPTIPHCTMATLIGLSVKIKLQRSL---PRR---FKVSVVIAPGSHNTEDDINKQLADKERVAAAMENPTLMRMVNDC 151          
BLAST of Gcaud9959.t1 vs. uniprot
Match: A0A0V0G594_TRIDM (FeS_assembly_P domain-containing protein (Fragment) n=3 Tax=Triatominae TaxID=70999 RepID=A0A0V0G594_TRIDM)

HSP 1 Score: 117 bits (294), Expect = 7.070e-31
Identity = 61/131 (46.56%), Postives = 90/131 (68.70%), Query Frame = 0
Query:   38 KEHVFEIIRDIRDPEYPHSLEELGVLKLEYVDVANPPTDSPGYGTVSIQFHPTVPHCSLASMIGLSIQSKLKESTVLEPKGEHYYKLKVICIEGTHNNFRDINKQLADKERVSAAFENPKIMRLLRECTEN 168
            KE VF+++R IRDPE P +LEEL V+  E +++     DS  Y  VS++F PTV HC+LA++IGL I+ KL+++ V      H YKLKV   +GTH    D+NKQ+ DKERV+AA ENP ++ ++++C ++
Sbjct:   11 KETVFDLVRSIRDPEKPATLEELDVVSEEGIEICRNWDDSIFY--VSLEFQPTVAHCNLATLIGLCIRVKLQKNLV------HKYKLKVTVKKGTHQTEEDVNKQINDKERVAAALENPSLLEMVQKCIKD 133          
BLAST of Gcaud9959.t1 vs. uniprot
Match: A0A0R3W383_TAEAS (FeS_assembly_P domain-containing protein n=1 Tax=Taenia asiatica TaxID=60517 RepID=A0A0R3W383_TAEAS)

HSP 1 Score: 117 bits (292), Expect = 2.450e-30
Identity = 65/125 (52.00%), Postives = 87/125 (69.60%), Query Frame = 0
Query:   41 VFEIIRDIRDPEYPHSLEELGVLKLEYVDVANPPTDSPGYGTVSIQFHPTVPHCSLASMIGLSIQSKLKESTVLEPKGEHYYKLKVICIEGTHNNFRDINKQLADKERVSAAFENPKIMRLLREC 165
            VFE IRDIRDPE+P++LE LGV++ E + V     D  G  TVS+QF PT+PHCS+A++IGLSI+ KL  S    P+    +K++V    G H++  DINKQLADKERV+AA ENP + R + +C
Sbjct:   39 VFEHIRDIRDPEHPYTLEVLGVVRKEDIAV-----DDAG-STVSVQFTPTIPHCSMATLIGLSIKVKLLRSL---PRR---FKIRVTIAPGMHDSEADINKQLADKERVAAAMENPALARAVNQC 151          
BLAST of Gcaud9959.t1 vs. uniprot
Match: A0A0R3X213_HYDTA (FeS_assembly_P domain-containing protein n=1 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3X213_HYDTA)

HSP 1 Score: 116 bits (291), Expect = 3.460e-30
Identity = 69/144 (47.92%), Postives = 96/144 (66.67%), Query Frame = 0
Query:   22 KVLRRETRDPSERLTLKEHVFEIIRDIRDPEYPHSLEELGVLKLEYVDVANPPTDSPGYGTVSIQFHPTVPHCSLASMIGLSIQSKLKESTVLEPKGEHYYKLKVICIEGTHNNFRDINKQLADKERVSAAFENPKIMRLLREC 165
            K L   TR+P   +T  E VFE IRDIRDPE+P++LE LGV++ E + V     D  G  +VS++F PT+PHCS+A++IGLSI+ KL  S    P+    ++++V+   G H +  DINKQLADKERV+AA ENP + R + +C
Sbjct:   24 KPLTSSTREP---ITAAE-VFEHIRDIRDPEHPYTLEALGVVRKEEIAV-----DDVG-SSVSVRFTPTIPHCSMATLIGLSIKVKLLRSL---PRR---FRIRVVIASGMHESEVDINKQLADKERVAAAMENPALARSVNQC 151          
BLAST of Gcaud9959.t1 vs. uniprot
Match: A0A224XM54_9HEMI (FeS_assembly_P domain-containing protein n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XM54_9HEMI)

HSP 1 Score: 117 bits (292), Expect = 4.050e-30
Identity = 62/154 (40.26%), Postives = 99/154 (64.29%), Query Frame = 0
Query:   16 NPNPEVKV-LRRETRDPSERLTLKEHVFEIIRDIRDPEYPHSLEELGVLKLEYVDVANPPTDSPGYGTVSIQFHPTVPHCSLASMIGLSIQSKLKESTVLEPKGEHYYKLKVICIEGTHNNFRDINKQLADKERVSAAFENPKIMRLLRECTEN 168
            N  P++ + ++ +     +    KE VF+++R IRDPE P +LE+L V+  E +++     DS  Y  VS++F PTV HC+LA++IGL I+ KL+++ V      H YKLKV   +GTH    D+NKQ+ DKERV+AA ENP ++ ++++C ++
Sbjct:   25 NEEPKIHMHIKDDEMITKQNQEFKETVFDLVRSIRDPEKPATLEDLDVVSEEGIEICRNWDDSIFY--VSLEFQPTVAHCNLATLIGLCIRVKLQKNLV------HKYKLKVTVKKGTHQTEEDVNKQINDKERVAAALENPSLLEMVQKCIKD 170          
BLAST of Gcaud9959.t1 vs. uniprot
Match: UPI001EE55260 (cytosolic iron-sulfur assembly component 2A-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE55260)

HSP 1 Score: 116 bits (291), Expect = 5.890e-30
Identity = 69/169 (40.83%), Postives = 99/169 (58.58%), Query Frame = 0
Query:    5 YGSSVHLNVPDNPNPEVKVLRRETR---DPSERLTLK---EHVFEIIRDIRDPEYPHSLEELGVLKLEYVDVANPPTDSPGYGTVSIQFHPTVPHCSLASMIGLSIQSKLKESTVLEPKGEHYYKLKVICIEGTHNNFRDINKQLADKERVSAAFENPKIMRLLRECTE 167
            + ++V   + +N +P  K    E     DP     LK   E +++IIRD+RDPE P +LEEL V+  E V V+       G   V + F PTVPHCSLAS+IGLS+++KL++           +KL +   EGTH+   +INKQ+ DKER++AA ENP +  L+ +CTE
Sbjct:    8 FKNAVPARMNENNSPPEKACNDENTTASDPERERELKILEETIYDIIRDVRDPEKPETLEELNVISEEGVHVSRL---QDGQLLVKLTFVPTVPHCSLASLIGLSLRTKLEKCL------PEQHKLDIFIKEGTHSTADEINKQINDKERIAAAMENPNLRELISKCTE 167          
BLAST of Gcaud9959.t1 vs. uniprot
Match: A0A068YFA9_ECHMU (FeS_assembly_P domain-containing protein n=2 Tax=Echinococcus TaxID=6209 RepID=A0A068YFA9_ECHMU)

HSP 1 Score: 115 bits (288), Expect = 9.810e-30
Identity = 67/146 (45.89%), Postives = 93/146 (63.70%), Query Frame = 0
Query:   20 EVKVLRRETRDPSERLTLKEHVFEIIRDIRDPEYPHSLEELGVLKLEYVDVANPPTDSPGYGTVSIQFHPTVPHCSLASMIGLSIQSKLKESTVLEPKGEHYYKLKVICIEGTHNNFRDINKQLADKERVSAAFENPKIMRLLREC 165
            + K +   TR+P   +T  E +FE IRDIRDPE+P++LE LGV++ E + V +         TVS+QF PT+PHCS+A++IGLSI+ KL  S    P+    +K+ V    G H    DINKQLADKERV+AA ENP + + + +C
Sbjct:   22 QFKPMSTSTREP---ITAAE-IFEHIRDIRDPEHPYTLEALGVVRREEIAVDD------AASTVSLQFTPTIPHCSMATLIGLSIKVKLLRSL---PRR---FKIHVTIASGMHETEADINKQLADKERVAAAMENPALAQAVNQC 151          
BLAST of Gcaud9959.t1 vs. uniprot
Match: UPI001CF5A73E (cytosolic iron-sulfur assembly component 2A-like isoform X1 n=4 Tax=Acropora TaxID=6127 RepID=UPI001CF5A73E)

HSP 1 Score: 114 bits (285), Expect = 2.090e-29
Identity = 59/146 (40.41%), Postives = 90/146 (61.64%), Query Frame = 0
Query:   20 EVKVLRRETRDPSERLTLKEHVFEIIRDIRDPEYPHSLEELGVLKLEYVDVANPPTDSPGYGTVSIQFHPTVPHCSLASMIGLSIQSKLKESTVLEPKGEHYYKLKVICIEGTHNNFRDINKQLADKERVSAAFENPKIMRLLREC 165
            E K+L        + L L + VF+I++DIRDPE P +LEEL V++ E++ +     D      + I+F PTVPHCSLA++IGL ++ KL+ S        + +KL +    GTH+   +INKQ+ DKER++AA ENP + +++ EC
Sbjct:    3 ENKILSTAADSSFDNLVLVQEVFDIVKDIRDPELPQTLEELHVIEEEFIKIDKIGNDDY---IIKIEFTPTVPHCSLATLIGLCLRVKLERSL------PYKFKLDISLSRGTHSTENEINKQINDKERIAAAMENPNLKKIVEEC 139          
BLAST of Gcaud9959.t1 vs. uniprot
Match: K1QP22_CRAGI (UPF0195 protein FAM96A n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1QP22_CRAGI)

HSP 1 Score: 113 bits (283), Expect = 3.530e-29
Identity = 64/142 (45.07%), Postives = 89/142 (62.68%), Query Frame = 0
Query:   27 ETRDPSERLTLKEHVFEIIRDIRDPEYPHSLEELGVLKLEYVDVANPPTDSPGYGTVSIQFHPTVPHCSLASMIGLSIQSKLKESTVLEPKGEHYYKLKVICIEGTHNNFRDINKQLADKERVSAAFENPKIMRLLRECTEN 168
            E  D  +   ++E V+++IR I DPE P +LEEL V+  E V V+    D      + + F PTVPHCSLAS+IGLSI++KL+ S  +  K    +KL +   EGTH    DINKQ+ DKER++AA ENP + R++ +C EN
Sbjct:    6 ENDDNGDLKQMRELVYDLIRGIIDPEKPETLEELNVVSEEDVSVSRLNKDY----LIKVVFVPTVPHCSLASLIGLSIRTKLETS--IPDK----FKLDIFIKEGTHETADDINKQINDKERIAAAMENPNLQRIVNQCLEN 137          
The following BLAST results are available for this feature:
BLAST of Gcaud9959.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQQ4_9FLOR9.160e-7869.87Mitotic spindle-associated MMXD complex subunit MI... [more]
A0A0R3UA17_MESCO1.140e-3147.26FeS_assembly_P domain-containing protein n=1 Tax=M... [more]
A0A0V0G594_TRIDM7.070e-3146.56FeS_assembly_P domain-containing protein (Fragment... [more]
A0A0R3W383_TAEAS2.450e-3052.00FeS_assembly_P domain-containing protein n=1 Tax=T... [more]
A0A0R3X213_HYDTA3.460e-3047.92FeS_assembly_P domain-containing protein n=1 Tax=H... [more]
A0A224XM54_9HEMI4.050e-3040.26FeS_assembly_P domain-containing protein n=1 Tax=P... [more]
UPI001EE552605.890e-3040.83cytosolic iron-sulfur assembly component 2A-like n... [more]
A0A068YFA9_ECHMU9.810e-3045.89FeS_assembly_P domain-containing protein n=2 Tax=E... [more]
UPI001CF5A73E2.090e-2940.41cytosolic iron-sulfur assembly component 2A-like i... [more]
K1QP22_CRAGI3.530e-2945.07UPF0195 protein FAM96A n=1 Tax=Crassostrea gigas T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002744MIP18 family-likePFAMPF01883FeS_assembly_Pcoord: 38..110
e-value: 2.5E-9
score: 37.2
IPR034904Fe-S cluster assembly domain superfamilyGENE3D3.30.300.130coord: 32..134
e-value: 1.3E-25
score: 91.0
IPR034904Fe-S cluster assembly domain superfamilySUPERFAMILY117916Fe-S cluster assembly (FSCA) domain-likecoord: 37..110
NoneNo IPR availableGENE3D6.10.250.1280coord: 137..166
e-value: 1.0E-12
score: 49.5
NoneNo IPR availablePANTHERPTHR12377:SF2CYTOSOLIC IRON-SULFUR ASSEMBLY COMPONENT 2Acoord: 38..166
IPR039796MIP18 familyPANTHERPTHR12377UNCHARACTERIZEDcoord: 38..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_556_length_22202_cov_4.379087contigNODE_556_length_22202_cov_4.379087:19587..20099 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9959.t1Gcaud9959.t1Gracilaria caudata M_176_S67 malemRNANODE_556_length_22202_cov_4.379087 19587..20099 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9959.t1 ID=Gcaud9959.t1|Name=Gcaud9959.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=171bp
MMAAYGSSVHLNVPDNPNPEVKVLRRETRDPSERLTLKEHVFEIIRDIRD
PEYPHSLEELGVLKLEYVDVANPPTDSPGYGTVSIQFHPTVPHCSLASMI
GLSIQSKLKESTVLEPKGEHYYKLKVICIEGTHNNFRDINKQLADKERVS
AAFENPKIMRLLRECTENLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002744MIP18-like
IPR034904FSCA_dom_sf
IPR039796MIP18