Gcaud993.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud993.t1
Unique NameGcaud993.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length219
Homology
BLAST of Gcaud993.t1 vs. uniprot
Match: A0A2V3IIU3_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIU3_9FLOR)

HSP 1 Score: 236 bits (602), Expect = 1.870e-74
Identity = 108/214 (50.47%), Postives = 154/214 (71.96%), Query Frame = 0
Query:    1 LLVYASFFVIDGHVTHGLNT-NDKLLVNFSPSS-FFGWLPPVAEIGIINPFGTKTSIITESTPSFSQLTTLDAFDFQRLLLFPPGVGPFNIPIAQTLTFTLLSAGVTDRSTTFFFEQSVDPEIVGQLCLAAGADSNITLREWNKAAARLSGVCRSGSARVVVQLQNALPNGLYTLWNIDVTPPLTPNKSISVGAFGGIPDVLATDEWGKASVTK 212
            LL  A +F + GH+ HG+N  ND LL N+S SS  F   PP+AEIG+I P GT  S+ITE+TP  S + T+DAFDF+  L FPPG GPFNIPI+Q  TF L S+ + +R T   FE S DP +VGQ+ L+AG + N+T+ +WN+A  R++G CR+G+A V +++QNALPNGL+++W++ V+  L PN+++S+  FGGIP+VL TD  G+ S+++
Sbjct:   20 LLANARYFSVPGHIAHGVNDFNDNLLANYSSSSNIFSSFPPLAEIGVITPGGTNASLITENTPLSSIVATIDAFDFRTFLGFPPGAGPFNIPISQAPTFNLFSSSLLERVTPSSFESSSDPNVVGQVYLSAGVNDNVTVADWNRATGRMTGTCRNGTAHVYIEMQNALPNGLFSMWDVGVSMALAPNETLSLSPFGGIPNVLTTDRNGRGSISR 233          
BLAST of Gcaud993.t1 vs. uniprot
Match: A0A2A5HEK6_9ALTE (Uncharacterized protein n=1 Tax=Alteromonadaceae bacterium TaxID=1916082 RepID=A0A2A5HEK6_9ALTE)

HSP 1 Score: 77.0 bits (188), Expect = 4.380e-13
Identity = 64/210 (30.48%), Postives = 94/210 (44.76%), Query Frame = 0
Query:    9 VIDGHVTHGLNT-NDKLLVNFSPSSF-----FGWLPPVAEIGIINPFGTKTSIITESTPSFSQLTTLDAFDFQRLLLFPPGVGPFNIPIAQTLTFTLLSA--GVTDRSTTFFFEQSVDPEIVGQLCLAAGADSNITLREWNKAAARLSGV----CRSGSARVVVQLQNALPNGLYTLWNIDVTPPLTPNKSISVGAFGGIPDVLATDEWG 206
            VI G+  HG+N  N+  LV+++ S F        +P + EIG   P       IT+ T S   L    +    R       V P N   +  L  + L      TDR     FE +      G   +A G +S  T+ EW +    +SGV    C      V + +++A PN LY+LW+I V  P T ++ +    FGG+P+V+ TDE G
Sbjct:   31 VITGYAAHGVNVFNNHTLVDYT-SEFPYAPGLNEIPALTEIGYFQPGADDAGTITDETDS--NLPVATSSSLARFFGVVDFVDPSNFNQSLDLIGSNLMGYQSTTDRGLLVPFELAGP----GDTYVAGGVNSRPTVGEWGE----ISGVARIRCDDDGGVVEISVRDAFPNQLYSLWDIGVLNPKTESEVVYSTPFGGLPNVMTTDENG 229          
BLAST of Gcaud993.t1 vs. uniprot
Match: A0A4R5H990_9ALTE (Uncharacterized protein n=1 Tax=Alteromonadaceae bacterium M269 TaxID=2546219 RepID=A0A4R5H990_9ALTE)

HSP 1 Score: 62.0 bits (149), Expect = 8.490e-8
Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 0
Query:  135 ITLREWNKAAARLSGVCRS-GSARVVVQLQNALPNGLYTLWNI-DVTPPLTPNKSISVGAFGGIPDVLATDEWGKASVTK 212
            ITL +W  A  RLS  CR  G+A V  +  N +PNGLY++W I  +T P   + + S   FGG+P+V+ T+E G+A  ++
Sbjct:  173 ITLGDWASAKGRLSYTCRDDGTAEVSARFSNLVPNGLYSMWGIWRITIPFAGDIT-SASPFGGVPNVVTTNERGRARFSR 251          
The following BLAST results are available for this feature:
BLAST of Gcaud993.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IIU3_9FLOR1.870e-7450.47Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2A5HEK6_9ALTE4.380e-1330.48Uncharacterized protein n=1 Tax=Alteromonadaceae b... [more]
A0A4R5H990_9ALTE8.490e-841.25Uncharacterized protein n=1 Tax=Alteromonadaceae b... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_458_length_24831_cov_4.365562contigNODE_458_length_24831_cov_4.365562:22166..22822 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud993.t1Gcaud993.t1Gracilaria caudata M_176_S67 malemRNANODE_458_length_24831_cov_4.365562 22166..22822 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud993.t1 ID=Gcaud993.t1|Name=Gcaud993.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=219bp
LLVYASFFVIDGHVTHGLNTNDKLLVNFSPSSFFGWLPPVAEIGIINPFG
TKTSIITESTPSFSQLTTLDAFDFQRLLLFPPGVGPFNIPIAQTLTFTLL
SAGVTDRSTTFFFEQSVDPEIVGQLCLAAGADSNITLREWNKAAARLSGV
CRSGSARVVVQLQNALPNGLYTLWNIDVTPPLTPNKSISVGAFGGIPDVL
ATDEWGKASVTKVGLLSV*
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