Gcaud9912.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9912.t1
Unique NameGcaud9912.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length441
Homology
BLAST of Gcaud9912.t1 vs. uniprot
Match: A0A2V3IFA7_9FLOR (Epithelial splicing regulatory protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFA7_9FLOR)

HSP 1 Score: 608 bits (1567), Expect = 4.220e-212
Identity = 299/362 (82.60%), Postives = 330/362 (91.16%), Query Frame = 0
Query:    1 MQPHFLVILDIETTCDDVNDPRHPEIVEFPWLVYHVASRTVLDSKQIFVAPRWNANPNPPPDAVRGLGTDVAFAPSLADALLQFDTYVYHSFVVTAKPFVLVTDGHWDISHVLLTEAAQKALALAPHFRTYIDLRAEFSKCYPMAPVPADRKTMFSYLHISIEPRASGLEECLALANLVTRLLSDGHVLDQPVFISDYEWTALPAQIPAVATPVATAVAVGGIVRLRGLPWTCSERDVAHFLSGIPVVPNGIHFVRNAQGKATGEAFVQLESADAVSLALGRHKQTVGRRYIEVFKSSPVDMANHLGRAEARRHMQTSNKRKSSSGSFGRQRANRQGKEANGGGSGGGYQPNAASSSGYSHL 362
            +QP FLVILDIETTCDD+NDPRHPEIVEFPWLVYH+ SR+VLD+KQIF+APRWNANPNPPPDAVRGLGTDVAFAPSLA+ALLQFDTY+YHSF++TAK FVLVTDGHWDI+HVLLTEAA+KA+ALAPHFRTY+DLRAEFS+CYP+AP PADRKTMFSYL+IS +PRASG+EECLAL+NLVTRLL+DGHV DQP+FISDYEWT LPA IPAVATPVATAVAVGGIVRLRGLPWTC+E DVA FL+GIPVV NGIHFVRNAQGKATGEAFVQLESADAV+LALGRHKQ VGRRYIEVFKSSPVDMANHLGRAEARRHM  SNKRKSSS SFG++R+ RQ              PNA SS+G S++
Sbjct:    9 IQPDFLVILDIETTCDDLNDPRHPEIVEFPWLVYHIPSRSVLDTKQIFIAPRWNANPNPPPDAVRGLGTDVAFAPSLAEALLQFDTYIYHSFMLTAKSFVLVTDGHWDITHVLLTEAARKAVALAPHFRTYLDLRAEFSRCYPVAPAPADRKTMFSYLNISTQPRASGVEECLALSNLVTRLLTDGHVFDQPLFISDYEWTTLPAHIPAVATPVATAVAVGGIVRLRGLPWTCTEADVADFLAGIPVVHNGIHFVRNAQGKATGEAFVQLESADAVTLALGRHKQMVGRRYIEVFKSSPVDMANHLGRAEARRHMHASNKRKSSSSSFGQRRSGRQ--------------PNATSSTGVSYV 356          
BLAST of Gcaud9912.t1 vs. uniprot
Match: R7QIY1_CHOCR (RRM domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIY1_CHOCR)

HSP 1 Score: 459 bits (1180), Expect = 3.380e-151
Identity = 218/311 (70.10%), Postives = 256/311 (82.32%), Query Frame = 0
Query:    5 FLVILDIETTCDDVNDPRHPEIVEFPWLVYHVASRTVLDSKQIFVAPRWNANPNPPPDAVRGLGTDVAFAPSLADALLQFDTYVYHSFVVTAKPFVLVTDGHWDISHVLLTEAAQKALALAPHFRTYIDLRAEFSKCYPMAPVPADRKTMFSYLHISIEPRASGLEECLALANLVTRLLSDGHVLDQPVFISDYEWTALPAQIPAVATPVATAVAVGGIVRLRGLPWTCSERDVAHFLSGIPVVPNGIHFVRNAQGKATGEAFVQLESADAVSLALGRHKQTVGRRYIEVFKSSPVDMANHLGRAEARRHM 315
            +LV+LD+E  CDD  D  H EIVE PWLV+ +A+ T  D KQIF+AP WNANPNPPPDAVRGLGTDV FA SLADA+L FDTY+Y SFVV  K F L+TDG WD+  +L  EAA+KA+ LAP+FRTYI+LRA+F +C+P AP P DRKTMFSYL+IS EPRASGLEEC ALA++V  LL  GHV  QP F+SDYEW+ +P +IPAVATP+A+AV VGGI+RLRGLPWTC E+D+  FL GI +VP GIHFVRNA GKATGEAFVQL+SA  VSLAL RHK+ +GRRYIEVFKSSPVDM+NHLGRA+ARR+M
Sbjct:   86 YLVVLDLEAICDDPADSYHHEIVELPWLVFDLATNTPRDHKQIFIAPLWNANPNPPPDAVRGLGTDVVFADSLADAILHFDTYIYQSFVVAGKSFYLLTDGPWDLKDLLFVEAARKAVILAPYFRTYINLRADFQRCFPAAPPPTDRKTMFSYLNISTEPRASGLEECAALASVVQCLLQAGHVFSQPEFVSDYEWSTIPNRIPAVATPLASAVPVGGIIRLRGLPWTCIEQDIVEFLHGIAIVPAGIHFVRNAHGKATGEAFVQLDSAKGVSLALSRHKEMMGRRYIEVFKSSPVDMSNHLGRADARRYM 396          
BLAST of Gcaud9912.t1 vs. uniprot
Match: M2X334_GALSU (RNA-binding protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X334_GALSU)

HSP 1 Score: 260 bits (665), Expect = 6.300e-76
Identity = 136/343 (39.65%), Postives = 199/343 (58.02%), Query Frame = 0
Query:    1 MQP--HFLVILDIETTCDDVNDPRHPEIVEFPWLVYHVASRTVLDSKQIFVAPRWNANPNPPPDAVRGLGTDVAFAPSLADALLQFDTYVYHSFVVTAKPFVLVTDGHWDISHVLLTEAAQKALALAPHFRTYIDLRAEFSKCYPMAPVPADRKTMFSYLHISIEPRASGLEECLALANLVTRLLSDGHVLDQPVFISDYEW------------TALPAQIPAV-----------------ATPVATAVAVGGIVRLRGLPWTCSERDVAHFLSGIPVVPNGIHFVRNAQGKATGEAFVQLESADAVSLALGRHKQTVGRRYIEVFKSSPVDMANHLGRAEAR 312
            +QP   +L+ILD+E T  D++     EI+E+PW VY +    VL+++ + +      N N   ++  G   DV  A +L +A+L FD +++  F  T K F L+TDG WD+ H+LL EA++K + LA H+R + DLR EF +C+P  P+P DR+ M ++L I +    +GLE+C ++A ++T++L  G+V   P  IS+ EW              L   +PA+                 A+PVA  V  G I+RLRGLPW+ ++ DV +FL G  V+P  +HFV N QGK  GEAFVQL S D V+ AL  H+Q +G RYIEVFKS+P +M+  L R   R
Sbjct:    4 LQPPYRYLIILDLEATAVDLSKLSEQEIIEWPWAVYDIVQARVLETQVVVIKGPAYDNSNRSVESYNG-SKDVVIAQNLREAVLYFDNFIFEKFSTTGKSFCLLTDGPWDLRHLLLVEASRKNIKLAHHYRVFFDLRVEFRRCFPQGPIPRDRQIMTNFLDIPLVTANNGLEDCYSIAAIITQMLLQGYVFSVPELISNEEWFKGGLPSVGNGGVHLAVPLPAIPIPYDLQSSSLLGSAIEASPVAAGVPTGSIIRLRGLPWSATKEDVLNFLEGAQVIPCAVHFVLNQQGKPRGEAFVQLLSVDDVNRALELHRQVLGHRYIEVFKSTPQEMSTVLSRQNGR 345          
BLAST of Gcaud9912.t1 vs. uniprot
Match: A0A6T6CQ36_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CQ36_9RHOD)

HSP 1 Score: 240 bits (613), Expect = 1.390e-71
Identity = 115/256 (44.92%), Postives = 173/256 (67.58%), Query Frame = 0
Query:   68 GTDVAFAPSLADALLQFDTYVYHSFVVTAKPFVLVTDGHWDISHVLLTEAAQKALALAPHFRTYIDLRAEFSKCYPMAPVPADRKTMFSYLHISIEP----------RASGLEECLALANLVTRLLSDGHVLDQPVFISDYEWTALPAQIPAVATPVATAVAVGGIVRLRGLPWTCSERDVAHFLSGIPVVPNGIHFVRNAQGKATGEAFVQLESADAVSLALGRHKQTVGRRYIEVFKSSPVDMANHLGRAEARR 313
            G D+ ++PSL +A+ QFD Y++ +FV   + F L+ DG WD+  +L+ EA +K++AL  HFRT+ DLRAEF KCY +   P DR+TM    ++  E           R  GL++C  L  ++ R+L++GHV  +PV I + EW+A+ A+     TP  +++ VGGIVRLRGLPW+C+E D+  FL  + V+P GI+FV N+Q K+TGEAF Q+  A+++ LA+ RH+ ++G RY+EVF+SSP +MA+ LG+A+ RR
Sbjct:   14 GGDLLYSPSLVEAIRQFDEYLFEAFVKQNRNFCLLCDGPWDVQQLLVGEATKKSIALNDHFRTFYDLRAEFQKCYELDAPPGDRRTMLEICNLLGEEGVLARLEGTIRGPGLDDCALLGQIIQRMLNEGHVFGEPVVIPEPEWSAVCARS---VTPGVSSMVVGGIVRLRGLPWSCTEEDILTFLEDVKVIPGGINFVLNSQKKSTGEAFAQVADAESMELAVLRHRHSMGHRYVEVFRSSPQEMASALGKADMRR 266          
BLAST of Gcaud9912.t1 vs. uniprot
Match: A0A7S3EEH1_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EEH1_9RHOD)

HSP 1 Score: 193 bits (490), Expect = 7.810e-53
Identity = 105/307 (34.20%), Postives = 158/307 (51.47%), Query Frame = 0
Query:    6 LVILDIETTCDDVNDPRHPEIVEFPWLVYHVASRTVLDSKQIFVAPRWNANPNPPPDAVRGLGTDVAFAPSLADALLQFDTYVYHSFVVTAKPFVLVTDGHWDISHVLLTEAAQKALALAPHFRTYIDLRAEFSKCYPMAPVPADRKTMFSYLHISIEPRASGLEECLALANLVTRLLSDGHVLDQPVFISDYEWTALPAQIPAVATPVATAVAVGGIVRLRGLPWTCSERDVAHFLSGIPVVPNGIHFVRNAQGKATGEAFVQLESADAVSLALGRHKQTVGRRYIEVFKSSPVDMANHLGRAEAR 312
            LVI+D+    D   +    +IV++ W  Y++  R +++ + + +   W A        V+              A+ QF+  +Y  FV   K F ++TD  W + HV + EA +K + LA H+  + DL++EF K  P    P DR  M    H +       ++E   +A +VT LL   H    P  +   +W      +PA A P+A A+ VGGIVRLRGLPW  +E DVA+F   + +VPN +H     Q K TG AFVQ  + +   +A+  H++ + +RYIEVFKSSP DMA  + RA+ R
Sbjct:   30 LVIVDLTVGSDPKREHEFQQIVQWDWAAYNILERKIVERRSVTMEREWEAADAEDDGRVQ-----------FQQAVNQFNQALYEMFVQKDKSFCMLTDNSWTLQHVFVMEAMRKNVQLASHYHVFFDLKSEFKKYEPNTYWPRDRHAMLE--HFNSPDVHEPMDE---IAQIVTLLLEHNHCFVYPETVQGVDWARETLGMPAHAAPIAAAIPVGGIVRLRGLPWAANEEDVANFFKDVELVPNAVHMTHTKQNKPTGLAFVQTATLEDAEIAVSFHRKMMDKRYIEVFKSSPQDMAAAMERADVR 320          
BLAST of Gcaud9912.t1 vs. uniprot
Match: A0A1X6NV02_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NV02_PORUM)

HSP 1 Score: 173 bits (438), Expect = 1.050e-43
Identity = 101/226 (44.69%), Postives = 128/226 (56.64%), Query Frame = 0
Query:   99 FVLVTDGHWDISHVLLTEAAQKALALAPHFRTYIDLRAEFSKCYPMAPVPADRKTMFSYLHISIEPRAS-----------GLEECLALANLVTRLLSDGHVLDQPVFISDYEWTALPAQIPAVATPVATA-VAVGGIVRLRGLPWTCSERDVAHFLSGIPVVPNGIHFVRNAQGKATGEAFVQLESADAVSLALGRHKQTVGRRYIEVFKSSPVDMANHLGRAEAR 312
            ++L TDG WD+S VL  EAA K L L P   T+ DLR EFS+  P A  P +R  + + LH+   P A             +    ALA +V RLL+ GH      F+S       P Q P +  PV TA V    IVRLRGLPW+ +E DV +F S +P  P G+ FVRNA GKATGEAF+Q+    ++  AL RH+  +G RY+EVF SSP DMA HL R + R
Sbjct:  293 YILATDGPWDLSVVLAREAAAKHLNLPPTLTTFFDLRTEFSRALPHAGRPHNRAALLAALHLPPPPSAGPIXXXXXXXXXSVAHVRALAGVVARLLASGHA-----FVS-------PVQPPPLFAPVVTAGVPAADIVRLRGLPWSATEADVLNFFSSVPATPGGVRFVRNAAGKATGEAFLQVPLG-SMDRALRRHRHMMGPRYVEVFASSPADMAAHLARCDGR 505          
BLAST of Gcaud9912.t1 vs. uniprot
Match: A0A0G4HBR1_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HBR1_9ALVE)

HSP 1 Score: 143 bits (361), Expect = 8.150e-34
Identity = 95/309 (30.74%), Postives = 153/309 (49.51%), Query Frame = 0
Query:    5 FLVILDIETTCDDVNDPRHPEIVEFPWLVYHVASRTVLDSKQIFVAPRWNANPNPPPDAVRGLG---TDVAFAPSLADALLQFDTYVYHSFVVTAKPFVLVTDGHWDISHVLLTEAAQKALALAPHFRTYIDLRAEFSKCYPMAPVPADRKTMFSYLHISIEPRASGLEECLALANLVTRLLSDGHVLDQPVFISDYEWTALPAQIPAVATPVATAVAVGGIVRLRGLPWTCSERDVAHFLSGIPVVPN--GIHFVRNAQGKATGEAFVQLESADAVSLALGRHKQTVGRRYIEVFKSSPVDMANHLGR 308
            +L+ +D E +      PR  EIVE+ ++V+  A+R   D+KQ+F+ P   A   P P      G   T +    +L  A+  FD  ++   V   K F LVT G   I   L T+AA K + LA H+  +IDL  EF+K + ++     +    + +  +      GL      A LV +L + GHV      I D  +    +++PA  +P   A     +VR+RGLP+  +E +V  F   + V+P    + F+ +  G+++GEAFV+   A     A+ +H+Q +G RYIE F+SS  ++  +L R
Sbjct:    7 YLICVDWELSGTGREPPRETEIVEWSFVVFDAANRQRSDTKQMFIRPEVVA---PTPAFFERTGYNQTQLTNGITLQQAVAAFDQAMFQQVVCNQKNFTLVTIGSTKIKDYLRTDAANKQVRLAAHYNHFIDLSEEFAKIHQLSSPNIQKICEVAQIPYTATTHYDGLPAAELAAQLVGQLYNAGHVFKTATTIPD-SYACDSSRVPATLSPFDPAF--DALVRIRGLPFQATENEVRAFFGSLQVLPGQGAVIFMTSPDGRSSGEAFVRFVDAAQADQAMEKHRQNMGTRYIECFRSSQPELTRYLRR 309          
BLAST of Gcaud9912.t1 vs. uniprot
Match: A0A7S1TG07_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TG07_9RHOD)

HSP 1 Score: 132 bits (333), Expect = 3.670e-32
Identity = 85/260 (32.69%), Postives = 127/260 (48.85%), Query Frame = 0
Query:   18 VNDPRHP----EIVEFPWLVYHVASRTVLDSKQIFVAPRWNA-----NPNPPPDA---------------VRGLGTDVAFAPSLADALLQFDTYVYHSFVVTAKPFVLVTDGHWDISHVLLTEAAQKALALAPHFRTYIDLRAEFSKCYPMAPVPADRKTMFSYLHIS--IEPRASGLEECLALANLVTRLLSDGHVLDQPVFISDYEWTALPAQIPAVATPVATAVAVGGIVRLRGLPWTCSERDVAHFLSGIPVVPNG 251
            V++ R P    EIV + W+V  +    V+D++   ++P+W +       +P   A                RG  T   +  +LA A+ +FD Y+Y  F   A  F L  D  W ++  L+ EA  K + L  +FR + DLR EF + YP + V +D +TM S L +S  +  +      C   A ++ R+LSDGH    P  I D +W       P  A  V   + VG I+RLRGLP+ C+E+D+  FL GI +VP G
Sbjct:   14 VDEKRWPNRVREIVSWSWVVVDLERAKVVDAQGFRISPQWTSISDKSYQHPISQAQESGQVEMNDGDQWRTRGSST---WVKNLAWAVRRFDEYIYSFFRTKAHTFCLAVDRSWALAEQLVAEAMAKGIVLPEYFRVFFDLRKEFCEQYP-SQVSSDTETMASALEVSSGVHDQCFPSRNCDLAARIIERMLSDGHRFAVPNIIPDTQWRVSTCLSPVGAQTVVAGLPVGRIIRLRGLPYQCTEKDIVEFLRGISIVPGG 269          
BLAST of Gcaud9912.t1 vs. uniprot
Match: D2UX37_NAEGR (Exonuclease family protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2UX37_NAEGR)

HSP 1 Score: 130 bits (326), Expect = 2.890e-30
Identity = 71/201 (35.32%), Postives = 118/201 (58.71%), Query Frame = 0
Query:    5 FLVILDIETTCDDVNDP----RHPEIVEFPWLVYHVASRTVLDSKQIFVAPRWNANPNPPPDAVRGLGTDVAFAP--SLADALLQFDTYVYHSFVVTAKPFVLVTDGHWDISHVLLTEAAQKALALAPHFRTYIDLRAEFSKCYPMAPVPADRKTMFSYLHIS-IEPRASGLEECLALANLVTRLLSDGHVLDQPVFISDY 198
            +LVI+D E TCD+  +P     + E++EFP++V+ +AS  V+  ++ +V P W+    P    + G+  ++      SL++A+  F  YV  +F    K F ++TD  WDI  +L+ EA  K ++   +FRT+ DLR E+SKCYP A V    K+M     +S +    SGL +CL ++ +V R++ DGH+ ++P+ +SDY
Sbjct:  134 YLVIIDFEATCDNGVNPVITRDNQEMIEFPFVVFDLASMEVIHKERYYVKPTWSDKLTPFCTQLTGITDEILEKEGISLSNAIQNFHNYVKKTFT-DGKTFCILTDSEWDIKGLLIKEATTKGISFDSYFRTFYDLRKEYSKCYPYAFVRG-LKSMVDQSGLSFVGQHHSGLCDCLTISEIVKRMIYDGHIFEEPIVVSDY 332          
BLAST of Gcaud9912.t1 vs. uniprot
Match: K1RI74_CRAGI (Epithelial splicing regulatory protein 2 n=3 Tax=Crassostrea TaxID=6564 RepID=K1RI74_CRAGI)

HSP 1 Score: 132 bits (331), Expect = 1.720e-29
Identity = 89/296 (30.07%), Postives = 149/296 (50.34%), Query Frame = 0
Query:   25 EIVEFPWLVYHVASRTVLDSKQIFVAPRWNANPNPPPDAV--------RGLGTD-VAFAPSLADALLQFDTYVYHSFVVT---AKPFVLVTDGHWDISHVLLTEAAQKALALAPHFRTYIDLRAEFSKCYPMAPVPADRKTMFSYLHISIEPRAS-GLEECLALANLVTRLLSDGHVLDQPVFISDYEWTALPAQIPAVATPVATAVAVGGIVRLRGLPWTCSERDVAHFLSGIPVVPNGIHFVRNAQGKATGEAFVQLESADAVSLALGRHKQTVGRRYIEVFKSSPVDMANHLG 307
            ++V F +L++ V +  V+  +Q +V P+    P+   + V         GL  + V  +  L   L +FD ++    V      K F ++TDG   +   L  EA+ K ++L  +   + D+R EF K Y    +P + K M  YL +  +     G+ +C  +AN++ RL++DGHV  +P  I++     + ++        +  V    +VR RGLPW  S++D+A F  G+ +   G+    + QG+  GEA V+LE+     LAL RHK  +G+RYIEV+K++  D  N  G
Sbjct:   27 QVVLFVYLLFDVLNCKVVAVQQHYVKPQ----PSETTETVLTEECKTETGLNEEAVKHSQPLEHILDEFDRFLSSKGVHPEHGGKSFCVLTDGQLHLRQCLHPEASNKNISLPSYLYKFYDIRKEFKKFYKTDSIP-NIKAMLDYLGLQEDNSVEYGIRQCQEMANVLHRLINDGHVFGEPEIINERLEPGICSK--------SDIVDDNHVVRARGLPWQSSDQDIARFFKGLNIAKGGVALCLSPQGRRNGEALVRLENEQNRDLALKRHKHHIGQRYIEVYKATGKDFVNVAG 309          
The following BLAST results are available for this feature:
BLAST of Gcaud9912.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFA7_9FLOR4.220e-21282.60Epithelial splicing regulatory protein 1 n=1 Tax=G... [more]
R7QIY1_CHOCR3.380e-15170.10RRM domain-containing protein n=1 Tax=Chondrus cri... [more]
M2X334_GALSU6.300e-7639.65RNA-binding protein n=1 Tax=Galdieria sulphuraria ... [more]
A0A6T6CQ36_9RHOD1.390e-7144.92Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S3EEH1_9RHOD7.810e-5334.20Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A1X6NV02_PORUM1.050e-4344.69Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A0G4HBR1_9ALVE8.150e-3430.74Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S1TG07_9RHOD3.670e-3232.69Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
D2UX37_NAEGR2.890e-3035.32Exonuclease family protein n=1 Tax=Naegleria grube... [more]
K1RI74_CRAGI1.720e-2930.07Epithelial splicing regulatory protein 2 n=3 Tax=C... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 435..440
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 357..404
e-value: 2.2E-9
score: 38.8
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 405..431
e-value: 4.4E-8
score: 34.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..373
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 348..364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..334
NoneNo IPR availablePANTHERPTHR13976HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATEDcoord: 218..384
NoneNo IPR availableCDDcd06133ERI-1_3'hExo_likecoord: 6..183
e-value: 8.40524E-23
score: 93.0537
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 223..295
e-value: 0.0094
score: 24.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 225..292
e-value: 7.2E-5
score: 22.5
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 376..401
e-value: 0.0029
score: 26.9
coord: 407..430
e-value: 0.044
score: 22.9
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 378..401
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 409..430
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 376..406
score: 13.359694
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 407..435
score: 11.530781
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 216..318
e-value: 3.9E-27
score: 96.3
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..202
e-value: 7.0E-31
score: 109.2
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 359..416
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 4..187
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 221..307

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1158_length_13188_cov_3.271589contigNODE_1158_length_13188_cov_3.271589:166..6787 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9912.t1Gcaud9912.t1Gracilaria caudata M_176_S67 malemRNANODE_1158_length_13188_cov_3.271589 166..6787 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9912.t1 ID=Gcaud9912.t1|Name=Gcaud9912.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=441bp
MQPHFLVILDIETTCDDVNDPRHPEIVEFPWLVYHVASRTVLDSKQIFVA
PRWNANPNPPPDAVRGLGTDVAFAPSLADALLQFDTYVYHSFVVTAKPFV
LVTDGHWDISHVLLTEAAQKALALAPHFRTYIDLRAEFSKCYPMAPVPAD
RKTMFSYLHISIEPRASGLEECLALANLVTRLLSDGHVLDQPVFISDYEW
TALPAQIPAVATPVATAVAVGGIVRLRGLPWTCSERDVAHFLSGIPVVPN
GIHFVRNAQGKATGEAFVQLESADAVSLALGRHKQTVGRRYIEVFKSSPV
DMANHLGRAEARRHMQTSNKRKSSSGSFGRQRANRQGKEANGGGSGGGYQ
PNAASSSGYSHLNQHLKTVHAGMRPHQCPVPNCEKAFGKRSDLKSHVSSV
HENERPFACEFCERRFAKKSNLSRHREKLHREKLEMTARR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR013087Znf_C2H2_type
IPR012677Nucleotide-bd_a/b_plait_sf
IPR036397RNaseH_sf
IPR036236Znf_C2H2_sf
IPR012337RNaseH-like_sf
IPR035979RBD_domain_sf