Gcaud9910.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9910.t1
Unique NameGcaud9910.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length116
Homology
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BLAST of Gcaud9910.t1 vs. uniprot
Match: A0A2V3IRV6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRV6_9FLOR)

HSP 1 Score: 144 bits (364), Expect = 7.990e-38
Identity = 68/106 (64.15%), Postives = 88/106 (83.02%), Query Frame = 0 
Query:   10 STIWTPELSGLATGRSCAEYLPEGEVYESVLRKLFASIEPIDACDIYLACLNALRQGTSDRINTNHTNGSWARVVLLGQRISDKNSGENVNEDIVKKTVSSVSGAL 115
            +++WTPELSGLATGRS AEYL EG++YE+VLRKLFA+I+P DACDIYL CLN L Q TS   +  +  GSWAR+V+LGQRI+DK S  ++++D+VKKTVSS+S +L
Sbjct:  251 NSLWTPELSGLATGRSAAEYLKEGQLYETVLRKLFAAIDPRDACDIYLQCLNTLLQATSRSASNTYITGSWARIVILGQRIADKQSFSDIDDDLVKKTVSSISESL 356
The following BLAST results are available for this feature:
BLAST of Gcaud9910.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IRV6_9FLOR7.990e-3864.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_4202_length_2476_cov_4.542138contigNODE_4202_length_2476_cov_4.542138:1752..2195 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9910.t1Gcaud9910.t1Gracilaria caudata M_176_S67 malemRNANODE_4202_length_2476_cov_4.542138 1752..2195 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9910.t1 ID=Gcaud9910.t1|Name=Gcaud9910.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=116bp
LDTTSNTKNSTIWTPELSGLATGRSCAEYLPEGEVYESVLRKLFASIEPI
DACDIYLACLNALRQGTSDRINTNHTNGSWARVVLLGQRISDKNSGENVN
EDIVKKTVSSVSGAL*
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