Gcaud9900.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9900.t1
Unique NameGcaud9900.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length436
Homology
BLAST of Gcaud9900.t1 vs. uniprot
Match: A0A2V3IID7_9FLOR (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (Ferredoxin) n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IID7_9FLOR)

HSP 1 Score: 766 bits (1977), Expect = 4.190e-276
Identity = 384/436 (88.07%), Postives = 407/436 (93.35%), Query Frame = 0
Query:    1 MHDGPARPPPPAHLVKDKSFMSDQAGIAGLDIESGAIQRRPTRVVPVGDILIGGGNPVVVQSMINEDTLDVDNAVNSIREMHEAGCEIVRVTCVSMAHAHAVGFIKQKLRAEYKDVPLVADVHHNGLKIALEVAKHVDKVRINPGLYVFEKPDINRTEYTDEEFETAKNKLRDTLKPLIISLRDQNKALRIGVNHGSLSERMLFTYGDTPRGMVESALECIRVCEDLDFHNIVISMKASKVLVMLAAYRMLAKRLDAEGMNYPLHLGVTEAGDGEYGRIKSTLGIGTLLAEGLGDTIRVSLTEAPIKEIPVCYGILQGLGLRRTMVEYVACPSCGRTLFNLETVLHEVREATKHMPGLSIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGRKEIRTVPETEGVQQLIALLKEDGVWVEPAVLA-EKTLVAESV 435
            MHDGPARPPPP  LVKDKSFMSDQ+GIAGLD+ESGAIQRR TR V VGD+LIGG NPVVVQSMINEDTLD+D AV SIREMHEAGCEIVRVTCVSMAHAHA+GFIK KLR EY+DVPLVADVHHNGLKIALEVAKHVDKVRINPGLYVFEKPD+ RTEY+ EEFE+AKNKLR+TLKPLIISLRDQ+KALRIGVNHGSLSERMLFTYGDTPRGMVESALECIRVCE+L F NIV+SMKASKVLVMLAAYRMLAKR++AEGM YPLHLGVTEAGDGEYGRIKSTLGIGTLLAEGLGDTIRVSLTEAP+KEIPVCY ILQGLGLRRTMVEYVACPSCGRTLFNLE+VLHEVREATKHMPGLSIAVMGCIVNGPGEMADADYGYVGK+PG+ISLYRGR EIRTV E  GV++L+ LL+EDGVWVE  V A EK L  E V
Sbjct:  109 MHDGPARPPPPPSLVKDKSFMSDQSGIAGLDMESGAIQRRETRAVRVGDVLIGGNNPVVVQSMINEDTLDIDGAVKSIREMHEAGCEIVRVTCVSMAHAHAIGFIKHKLRDEYQDVPLVADVHHNGLKIALEVAKHVDKVRINPGLYVFEKPDVKRTEYSKEEFESAKNKLRETLKPLIISLRDQDKALRIGVNHGSLSERMLFTYGDTPRGMVESALECIRVCEELKFGNIVVSMKASKVLVMLAAYRMLAKRMEAEGMQYPLHLGVTEAGDGEYGRIKSTLGIGTLLAEGLGDTIRVSLTEAPVKEIPVCYSILQGLGLRRTMVEYVACPSCGRTLFNLESVLHEVREATKHMPGLSIAVMGCIVNGPGEMADADYGYVGKKPGHISLYRGRTEIRTVAEERGVEELVKLLQEDGVWVEAPVQATEKELAGERV 544          
BLAST of Gcaud9900.t1 vs. uniprot
Match: R7QCN9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCN9_CHOCR)

HSP 1 Score: 733 bits (1893), Expect = 2.170e-264
Identity = 367/432 (84.95%), Postives = 391/432 (90.51%), Query Frame = 0
Query:    1 MHDGPARPPPPAHLVKDKSFMSDQAGIAGLDIESGAIQRRPTRVVPVGDILIGGGNPVVVQSMINEDTLDVDNAVNSIREMHEAGCEIVRVTCVSMAHAHAVGFIKQKLRAEYKDVPLVADVHHNGLKIALEVAKHVDKVRINPGLYVFEKPDINRTEYTDEEFETAKNKLRDTLKPLIISLRDQNKALRIGVNHGSLSERMLFTYGDTPRGMVESALECIRVCEDLDFHNIVISMKASKVLVMLAAYRMLAKRLDAEGMNYPLHLGVTEAGDGEYGRIKSTLGIGTLLAEGLGDTIRVSLTEAPIKEIPVCYGILQGLGLRRTMVEYVACPSCGRTLFNLETVLHEVREATKHMPGLSIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGRKEIRTVPETEGVQQLIALLKEDGVWVEPAVLAEKTLVA 432
            MHDGPARPPPP  +VK K FM DQ+G  GLDI SGAIQRR T  V VGDI+IG  NPVVVQSMINEDTLD+D +  SI+EMHEAGCEIVR+TCVSMAHAHAVGFIK+KLR EY DVPLVADVHHNGLKIALEVAKHVDKVRINPGLYVFEKPD  RTEYT +EF+ A+ KLR TL+PLIISLRDQ KALRIGVNHGSLSERMLFTYGDTPRGMVESALECIRVCEDL+FHNIVISMKASKVLVMLAAYR+L++RL  E M YPLHLGVTEAGDGEYGRIKSTLGIGTLLAEGLGDTIRVSLTEAPIKEIPVCYGILQGLGLRRTMVEYVACPSCGRTLFNLETVLHEVREATKHMPGLSIAVMGCIVNGPGEMADADYGYVGK PG ISLYRGRKEIRTV E  GV++L++LLK+DGVWVEP  + +  + A
Sbjct:   45 MHDGPARPPPPPGMVKGKDFMKDQSGNVGLDINSGAIQRRETTPVRVGDIIIGASNPVVVQSMINEDTLDIDGSFASIKEMHEAGCEIVRITCVSMAHAHAVGFIKEKLRKEYMDVPLVADVHHNGLKIALEVAKHVDKVRINPGLYVFEKPDPRRTEYTPKEFDAAEEKLRKTLEPLIISLRDQGKALRIGVNHGSLSERMLFTYGDTPRGMVESALECIRVCEDLNFHNIVISMKASKVLVMLAAYRLLSRRLAEEDMPYPLHLGVTEAGDGEYGRIKSTLGIGTLLAEGLGDTIRVSLTEAPIKEIPVCYGILQGLGLRRTMVEYVACPSCGRTLFNLETVLHEVREATKHMPGLSIAVMGCIVNGPGEMADADYGYVGKTPGKISLYRGRKEIRTVREEVGVEELVSLLKQDGVWVEPVEVVKSPVTA 476          
BLAST of Gcaud9900.t1 vs. uniprot
Match: A0A5J4Z4N1_PORPP (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (Ferredoxin) n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4N1_PORPP)

HSP 1 Score: 676 bits (1743), Expect = 2.940e-241
Identity = 339/433 (78.29%), Postives = 374/433 (86.37%), Query Frame = 0
Query:    1 MHDGPARPPPPAH-----------LVKDKSFMSDQAGIAGLDIESGAIQRRPTRVVPVGDILIGGGNPVVVQSMINEDTLDVDNAVNSIREMHEAGCEIVRVTCVSMAHAHAVGFIKQKLRAEYKDVPLVADVHHNGLKIALEVAKHVDKVRINPGLYVFEKPDINRTEYTDEEFETAKNKLRDTLKPLIISLRDQNKALRIGVNHGSLSERMLFTYGDTPRGMVESALECIRVCEDLDFHNIVISMKASKVLVMLAAYRMLAKRLDAEGMNYPLHLGVTEAGDGEYGRIKSTLGIGTLLAEGLGDTIRVSLTEAPIKEIPVCYGILQGLGLRRTMVEYVACPSCGRTLFNLETVLHEVREATKHMPGLSIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGRKEIRTVPETEGVQQLIALLKEDGVWVEP 422
            MHDGPARP   A            L+KDKS + DQAG+  +   +GAIQRR TR V VGD+ IGG +PVVVQSMINEDTLD+D +V SIR +HEAGCEIVRVT  SMAHA A+G+IK +LR EYKDVPLVADVHHNG+KIALEVAKH++KVRINPGLYVFEKPD NR EYT E+F+ AK KL+  L+PL++SLRDQNKA+RIGVNHGSLSERMLFTYGDTP GMVESA+E I VC +L+FHN+VISMKASKV VMLAAYRMLA R+DA G +YPLHLGVTEAGDGEYGRIKSTLGIGTLLA+GLGDTIRVSLTE PIKEIPVCYGILQGLGLRRTMVEYVACPSCGRTLFNLETVLHEVREATKHMP LSIAVMGCIVNGPGEMADADYGYVGK PG ISLYRGR E+RTV E  GV++L+ LLKEDGVWV+P
Sbjct:   42 MHDGPARPQTGAEWAVKDKEAAAALMKDKSALKDQAGVREMMKMTGAIQRRATRAVQVGDVFIGGTSPVVVQSMINEDTLDIDGSVRSIRALHEAGCEIVRVTVPSMAHAFALGYIKDRLREEYKDVPLVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPDPNRVEYTKEDFDVAKQKLKTQLEPLVVSLRDQNKAMRIGVNHGSLSERMLFTYGDTPEGMVESAIEVIDVCRELNFHNLVISMKASKVPVMLAAYRMLAARMDALGYDYPLHLGVTEAGDGEYGRIKSTLGIGTLLADGLGDTIRVSLTEDPIKEIPVCYGILQGLGLRRTMVEYVACPSCGRTLFNLETVLHEVREATKHMPSLSIAVMGCIVNGPGEMADADYGYVGKTPGKISLYRGRSEVRTVNELNGVEELVKLLKEDGVWVDP 474          
BLAST of Gcaud9900.t1 vs. uniprot
Match: A0A7V5I657_9BACT (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7V5I657_9BACT)

HSP 1 Score: 674 bits (1739), Expect = 1.780e-240
Identity = 332/419 (79.24%), Postives = 374/419 (89.26%), Query Frame = 0
Query:    4 GPARPPPPAHLVKDKSFMSDQAGIAGLDIESGAIQRRPTRVVPVGDILIGGGNPVVVQSMINEDTLDVDNAVNSIREMHEAGCEIVRVTCVSMAHAHAVGFIKQKLRAEYKDVPLVADVHHNGLKIALEVAKHVDKVRINPGLYVFEKPDINRTEYTDEEFETAKNKLRDTLKPLIISLRDQNKALRIGVNHGSLSERMLFTYGDTPRGMVESALECIRVCEDLDFHNIVISMKASKVLVMLAAYRMLAKRLDAEGMNYPLHLGVTEAGDGEYGRIKSTLGIGTLLAEGLGDTIRVSLTEAPIKEIPVCYGILQGLGLRRTMVEYVACPSCGRTLFNLETVLHEVREATKHMPGLSIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGRKEIRTVPETEGVQQLIALLKEDGVWVEP 422
            GPARP  P  + K K  +SDQ+G+  LD+ +G+I RR TR V VGD+ IGGGNPVVVQSMINEDTLD++  V SIR +HEAGCE+VR+T  SMAHAHAVGFIKQ+LR  Y+DVPLVADVHHNG+ IALEVAKHVDKVRINPGLYVFEKPD NRTEY+  +FE A  KL++TLKPLI+SLR+Q+KA+RIGVNHGSLSERMLFTYGDTP GMVESALECIRVC +LDFHN+VISMKASKV VM+AAYR+LAKRLD E M+YP+HLGVTEAGDGEYGRIKS++GIG LLAEG+GDTIRVSLTE P+KEIPVCYGILQ LGLRRTMVEYVACPSCGRTLFN+E VLH+VR+ATKHMPGLSIAVMGCIVNGPGEMADADYGYVGK PG ISLYRGR+EIRTVPE +GV +LI L+KEDGVWV+P
Sbjct:   62 GPARPTAP--IPKPKDALSDQSGLVNLDL-TGSIPRRKTRAVRVGDVYIGGGNPVVVQSMINEDTLDIEGCVASIRRLHEAGCEVVRLTVPSMAHAHAVGFIKQRLRETYRDVPLVADVHHNGMNIALEVAKHVDKVRINPGLYVFEKPDPNRTEYSRADFEAAAQKLKETLKPLILSLREQDKAMRIGVNHGSLSERMLFTYGDTPEGMVESALECIRVCRELDFHNLVISMKASKVPVMMAAYRLLAKRLDQESMDYPIHLGVTEAGDGEYGRIKSSIGIGGLLAEGIGDTIRVSLTEDPVKEIPVCYGILQALGLRRTMVEYVACPSCGRTLFNIEEVLHKVRDATKHMPGLSIAVMGCIVNGPGEMADADYGYVGKTPGKISLYRGREEIRTVPENQGVAELIKLMKEDGVWVDP 477          
BLAST of Gcaud9900.t1 vs. uniprot
Match: A0A7S2ZKH2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZKH2_9RHOD)

HSP 1 Score: 665 bits (1717), Expect = 1.030e-237
Identity = 327/421 (77.67%), Postives = 380/421 (90.26%), Query Frame = 0
Query:   18 KSFMSDQAGIAGLDIESGAIQRRPTRVVPVGDILIGGGNPVVVQSMINEDTLDVDNAVNSIREMHEAGCEIVRVTCVSMAHAHAVGFIKQKLRAEYKDVPLVADVHHNGLKIALEVAKHVDKVRINPGLYVFEKPDINRTEYTDEEFETAKNKLRDTLKPLIISLRDQNKALRIGVNHGSLSERMLFTYGDTPRGMVESALECIRVCEDLDFHNIVISMKASKVLVMLAAYRMLAKRLDAEGMNYPLHLGVTEAGDGEYGRIKSTLGIGTLLAEGLGDTIRVSLTEAPIKEIPVCYGILQGLGLRRTMVEYVACPSCGRTLFNLETVLHEVREATKHMPGLSIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGRKEIRTVPETEGVQQLIALLKEDGVWVEPAVLA---EKTLVAESV 435
            K  M DQ G+  LD+ +G++ RR TR V VGDILIGGGNPVV+QSMINEDT+D+D A  +IR++HE GCEIVR+T  S+AHAHAVGFIK+KLRAEY+DVPLVADVHHNG++IALEVAKHVDKVRINPGLYV+EKPD NR EYT+E+F+    ++++ L+PLI+ LRDQ KA+RIGVNHGSL+ERMLFTYGDTP GMVESALECI++C +LDFHN++ISMKASKV VML+AYR+LA+RL+AEGM+YPLHLGVTEAGDGEYGRIKSTLGIGTLLAEG+GDTIRVSLTE P+KEIPV YGILQGLGLRRTMVEYVACPSCGRTLFNLETVLH+VREATKHMPGLSIAVMGCIVNGPGEMADADYGYVG+ PG I+LYRGR+EIR VPE +GVQ+LIALL+EDGVWV+P  L+   E+T+ AE+V
Sbjct:   49 KDAMKDQTGMMNLDL-TGSVPRRNTRAVQVGDILIGGGNPVVIQSMINEDTMDIDGAYAAIRKLHEEGCEIVRLTVPSLAHAHAVGFIKEKLRAEYQDVPLVADVHHNGMRIALEVAKHVDKVRINPGLYVYEKPDPNRVEYTEEDFKKLAAQMKEKLEPLIVCLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESALECIKICRELDFHNLIISMKASKVPVMLSAYRLLAQRLEAEGMDYPLHLGVTEAGDGEYGRIKSTLGIGTLLAEGIGDTIRVSLTEDPVKEIPVGYGILQGLGLRRTMVEYVACPSCGRTLFNLETVLHKVREATKHMPGLSIAVMGCIVNGPGEMADADYGYVGRGPGTIALYRGREEIRVVPEDDGVQELIALLQEDGVWVDPPELSAEQEETVEAEAV 468          
BLAST of Gcaud9900.t1 vs. uniprot
Match: M2Y1H8_GALSU ((E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y1H8_GALSU)

HSP 1 Score: 649 bits (1673), Expect = 2.050e-231
Identity = 321/405 (79.26%), Postives = 362/405 (89.38%), Query Frame = 0
Query:   18 KSFMSDQAGIAGLDIESGAIQRRPTRVVPVGDILIGGGNPVVVQSMINEDTLDVDNAVNSIREMHEAGCEIVRVTCVSMAHAHAVGFIKQKLRAEYKDVPLVADVHHNGLKIALEVAKHVDKVRINPGLYVFEKPDINRTEYTDEEFETAKNKLRDTLKPLIISLRDQNKALRIGVNHGSLSERMLFTYGDTPRGMVESALECIRVCEDLDFHNIVISMKASKVLVMLAAYRMLAKRLDAEGMNYPLHLGVTEAGDGEYGRIKSTLGIGTLLAEGLGDTIRVSLTEAPIKEIPVCYGILQGLGLRRTMVEYVACPSCGRTLFNLETVLHEVREATKHMPGLSIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGRKEIRTVPETEGVQQLIALLKEDGVWVEP 422
            K +  DQ G    D+E G+I RR TR V VGD+ IGGG+PVVVQSMINEDTL +D  V +IR +HEAGCEIVR+T  S+AHA+AVGFIKQKL+  Y+DVPLVADVHHNGLKIALEVAKHV+KVRINPGLYVFEK D NRTEYT +EF++ K+KL++TLKPLI++LRDQ KA+RIGVNHGSLSERMLFT+GDTP+GMVESALECIRVCE+LDFHN+VISMKASKV VMLAAYR+LAKR+D EG +YP HLGVTEAGDGEYGRIKSTLGIGTLLAEG+GDTIRVSLTE P+KEI VCYGILQGLGLRRTMVEYVACPSCGRTLF++E VLH+VREATKHMPGLSIAVMGCIVNGPGEMADADYGYVGK  GYISLYRG++EIR V E  GV++LI LLK+DGVW +P
Sbjct:   20 KDYFKDQVGWNNWDME-GSIPRRKTRPVWVGDVCIGGGSPVVVQSMINEDTLQIDRCVTAIRNLHEAGCEIVRLTVPSLAHAYAVGFIKQKLKETYQDVPLVADVHHNGLKIALEVAKHVEKVRINPGLYVFEKRDPNRTEYTKKEFQSMKDKLKETLKPLIVTLRDQGKAMRIGVNHGSLSERMLFTFGDTPQGMVESALECIRVCEELDFHNLVISMKASKVPVMLAAYRLLAKRMDEEGFHYPFHLGVTEAGDGEYGRIKSTLGIGTLLAEGIGDTIRVSLTEDPVKEISVCYGILQGLGLRRTMVEYVACPSCGRTLFHIEDVLHQVREATKHMPGLSIAVMGCIVNGPGEMADADYGYVGKTRGYISLYRGKEEIRVVKEEYGVKELINLLKQDGVWKDP 423          
BLAST of Gcaud9900.t1 vs. uniprot
Match: B6DXA0_NEOYE (Putative chloroplast 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Bangiaceae TaxID=31345 RepID=B6DXA0_NEOYE)

HSP 1 Score: 624 bits (1609), Expect = 4.570e-221
Identity = 304/399 (76.19%), Postives = 352/399 (88.22%), Query Frame = 0
Query:   30 LDIESGAIQRRPTRVVPVGDILIGGGNPVVVQSMINEDTLDVDNAVNSIREMHEAGCEIVRVTCVSMAHAHAVGFIKQKLRAEYKDVPLVADVHHNGLKIALEVAKHVDKVRINPGLYVFEKPDINRTEYTDEEFETAKNKLRDTLKPLIISLRDQNKALRIGVNHGSLSERMLFTYGDTPRGMVESALECIRVCEDLDFHNIVISMKASKVLVMLAAYRMLAKRLDAEGMNYPLHLGVTEAGDGEYGRIKSTLGIGTLLAEGLGDTIRVSLTEAPIKEIPVCYGILQGLGLRRTMVEYVACPSCGRTLFNLETVLHEVREATKHM----PGLSIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGRKEIRTVPETEGVQQLIALLKEDGVWVEPAV 424
            LDI +GA+ RR TR V VGDI IGGGNPVVVQSMINEDTLDVDNA  SIR +HE GCE+VRVTCVSMAHAHAVGFIK+KLRAEY+DVPLVADVHHNG+KIALEVAKHVDKVRINPGLYVFEKP   RTEY+DEEF   K+KL+ TL PL++SL++Q KA+RIGVNHGSL+ERM+FTYGDTPRGMVESA+ECI +C +LDFHN+VISMKASKV VM+AAYR LA RLDAEG +YP+HLGVTEAGDGEYGR+KS++GIGTLL EG+GDT+RVSLTE P+KEIPVCYGILQ L LRRTM E+VACPSCGRTLF+LE VL +VR ATKH+    P +SI+V+GCIVNGPGEMADADYGYVG + GYI+LYR ++ I+TVP+ EGV+ L+ LL+ DGVW++P V
Sbjct:   80 LDISTGAVIRRKTRAVRVGDISIGGGNPVVVQSMINEDTLDVDNATASIRALHEIGCEMVRVTCVSMAHAHAVGFIKEKLRAEYQDVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKEGRTEYSDEEFNRLKDKLKATLTPLVLSLKEQGKAMRIGVNHGSLAERMMFTYGDTPRGMVESAMECIEICRELDFHNLVISMKASKVPVMIAAYRQLALRLDAEGYDYPIHLGVTEAGDGEYGRVKSSIGIGTLLGEGIGDTLRVSLTENPMKEIPVCYGILQALNLRRTMTEWVACPSCGRTLFDLEDVLADVRAATKHLDKLDPPISISVLGCIVNGPGEMADADYGYVGSKAGYITLYRRKEVIKTVPQAEGVKALVELLQSDGVWLDPPV 478          
BLAST of Gcaud9900.t1 vs. uniprot
Match: A0A6B3NPF0_9CYAN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) n=2 Tax=unclassified Symploca TaxID=2620434 RepID=A0A6B3NPF0_9CYAN)

HSP 1 Score: 618 bits (1594), Expect = 4.960e-220
Identity = 305/386 (79.02%), Postives = 340/386 (88.08%), Query Frame = 0
Query:   37 IQRRPTRVVPVGDILIGGGNPVVVQSMINEDTLDVDNAVNSIREMHEAGCEIVRVTCVSMAHAHAVGFIKQKLRAEYKDVPLVADVHHNGLKIALEVAKHVDKVRINPGLYVFEKPDINRTEYTDEEFETAKNKLRDTLKPLIISLRDQNKALRIGVNHGSLSERMLFTYGDTPRGMVESALECIRVCEDLDFHNIVISMKASKVLVMLAAYRMLAKRLDAEGMNYPLHLGVTEAGDGEYGRIKSTLGIGTLLAEGLGDTIRVSLTEAPIKEIPVCYGILQGLGLRRTMVEYVACPSCGRTLFNLETVLHEVREATKHMPGLSIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGRKEIRTVPETEGVQQLIALLKEDGVWVEP 422
            I RR TR V VG++ IGG NPVVVQSMINEDTLD+D +V +IR +HE GCEIVRVT  SMAHA A+  IK KL A Y+ VPLVADVHHNG+KIALEVAKHVDKVRINPGLYVFEKP  NRTEYT+ EFE    K+R+TL+PL++SLRDQ KA+RIGVNHGSL+ERMLFTYGDTP GMVESALE IR+CE LDF NIVIS+KAS+V VMLAAYR++ KR+D  GM+YPLHLGVTEAGDGEYGRIKST GIGTLLAEG+GDTIRVSLTEAP KEIPVCY ILQ LGLR+TMVEYVACPSCGRTLFNLE VLH+VREATKH+ GL IAVMGCIVNGPGEMADADYGYVGKQ GYISLYRGR+EI+ VPET+GV++LI L+K DG+WVEP
Sbjct:   20 IHRRQTRPVKVGNVTIGGNNPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSMAHAKALAAIKDKLSATYQSVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKANRTEYTEAEFEEIGIKIRETLEPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESALEFIRICESLDFRNIVISLKASRVPVMLAAYRLMVKRMDEFGMDYPLHLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHQVREATKHLTGLDIAVMGCIVNGPGEMADADYGYVGKQAGYISLYRGREEIKKVPETQGVEELINLIKADGLWVEP 405          
BLAST of Gcaud9900.t1 vs. uniprot
Match: A0A2P8WJI9_9CYAN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) n=1 Tax=filamentous cyanobacterium CCP5 TaxID=2107701 RepID=A0A2P8WJI9_9CYAN)

HSP 1 Score: 617 bits (1592), Expect = 1.080e-219
Identity = 305/387 (78.81%), Postives = 338/387 (87.34%), Query Frame = 0
Query:   37 IQRRPTRVVPVGDILIGGGNPVVVQSMINEDTLDVDNAVNSIREMHEAGCEIVRVTCVSMAHAHAVGFIKQKLRAEYKDVPLVADVHHNGLKIALEVAKHVDKVRINPGLYVFEKPDINRTEYTDEEFETAKNKLRDTLKPLIISLRDQNKALRIGVNHGSLSERMLFTYGDTPRGMVESALECIRVCEDLDFHNIVISMKASKVLVMLAAYRMLAKRLDAEGMNYPLHLGVTEAGDGEYGRIKSTLGIGTLLAEGLGDTIRVSLTEAPIKEIPVCYGILQGLGLRRTMVEYVACPSCGRTLFNLETVLHEVREATKHMPGLSIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGRKEIRTVPETEGVQQLIALLKEDGVWVEPA 423
            I RR TR VPVGD+ IGG +PVVVQSMINEDTLDV+ AV +IR +HE GCEIVRVT  SMAHA A+  IKQKL+A YKDVPLVADVHHNG+KIALEVAKHVDKVRINPGLYVFEKP   R+EYT+ EF    NK+R+TL+PL++SLRDQ KA+RIGVNHGSL+ERMLFTYGDTP GMVESALE IR+CE LDF+N+VIS+KAS+V VMLAAYR++ KR+D   M YPLHLGVTEAGDGEYGRIKST GIGTLLAEG+GDTIRVSLTEAP KEIPVCY ILQ LGLR+TMVEYVACPSCGRTLFNLE VLH+VREATKH+ GL IAVMGCIVNGPGEMADADYGYVGK PGYISLYRGR+EI  VPE  GV +LI L+K DG WV+PA
Sbjct:   21 IHRRKTRPVPVGDVTIGGNHPVVVQSMINEDTLDVEGAVAAIRRLHEIGCEIVRVTVPSMAHAKALADIKQKLKASYKDVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPQTGRSEYTEAEFNQIGNKIRETLEPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESALEFIRICESLDFYNLVISLKASRVPVMLAAYRLMVKRMDEADMAYPLHLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVREATKHLTGLDIAVMGCIVNGPGEMADADYGYVGKTPGYISLYRGREEINKVPEDRGVAELINLIKADGRWVDPA 407          
BLAST of Gcaud9900.t1 vs. uniprot
Match: A0A6P0T6T7_9CYAN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) n=1 Tax=Cyanothece sp. SIO2G6 TaxID=2607797 RepID=A0A6P0T6T7_9CYAN)

HSP 1 Score: 616 bits (1589), Expect = 2.960e-219
Identity = 305/386 (79.02%), Postives = 340/386 (88.08%), Query Frame = 0
Query:   37 IQRRPTRVVPVGDILIGGGNPVVVQSMINEDTLDVDNAVNSIREMHEAGCEIVRVTCVSMAHAHAVGFIKQKLRAEYKDVPLVADVHHNGLKIALEVAKHVDKVRINPGLYVFEKPDINRTEYTDEEFETAKNKLRDTLKPLIISLRDQNKALRIGVNHGSLSERMLFTYGDTPRGMVESALECIRVCEDLDFHNIVISMKASKVLVMLAAYRMLAKRLDAEGMNYPLHLGVTEAGDGEYGRIKSTLGIGTLLAEGLGDTIRVSLTEAPIKEIPVCYGILQGLGLRRTMVEYVACPSCGRTLFNLETVLHEVREATKHMPGLSIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGRKEIRTVPETEGVQQLIALLKEDGVWVEP 422
            I RR TR V VGDI IGGG PVVVQSMINEDT DVD AV +IR +HE GCEIVRVT  S+ HA AVG IK KL+A Y+DVPLVADVHHNG+KIALEVAKHVDKVRINPGLYVFEKP  +RTEYT  EF+    K+R+TL+PL++SLR+QNKA+RIGVNHGSL+ERMLFTYGDTP GMVESALE IR+CE LDF+NIVIS+KAS+V VMLAAYR++AKR+D  GM+YPLHLGVTEAGDGEYGRIKST GIGTLLA+G+GDTIRVSLTEAP KEIPVCY ILQ LGLR+TMVEYVACPSCGRTLFNLE VLH+VREATKH+ GL IAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGR+EI+ VPE +GV+ LI L+K DG W +P
Sbjct:   20 IHRRKTRPVKVGDITIGGGYPVVVQSMINEDTHDVDAAVAAIRRLHEMGCEIVRVTVPSLGHAKAVGEIKAKLKATYRDVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPSSDRTEYTQAEFDAIGEKIRETLEPLVVSLREQNKAMRIGVNHGSLAERMLFTYGDTPEGMVESALEFIRICESLDFYNIVISLKASRVPVMLAAYRLMAKRMDEFGMDYPLHLGVTEAGDGEYGRIKSTAGIGTLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHQVREATKHLTGLDIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGREEIKKVPEDQGVEALINLIKADGRWFDP 405          
The following BLAST results are available for this feature:
BLAST of Gcaud9900.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IID7_9FLOR4.190e-27688.074-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
R7QCN9_CHOCR2.170e-26484.95Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4Z4N1_PORPP2.940e-24178.294-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
A0A7V5I657_9BACT1.780e-24079.244-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
A0A7S2ZKH2_9RHOD1.030e-23777.67Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2Y1H8_GALSU2.050e-23179.26(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synth... [more]
B6DXA0_NEOYE4.570e-22176.19Putative chloroplast 4-hydroxy-3-methylbut-2-en-1-... [more]
A0A6B3NPF0_9CYAN4.960e-22079.024-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
A0A2P8WJI9_9CYAN1.080e-21978.814-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
A0A6P0T6T7_9CYAN2.960e-21979.024-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011005Dihydropteroate synthase-likeGENE3D3.20.20.20coord: 36..322
e-value: 2.1E-103
score: 347.5
IPR011005Dihydropteroate synthase-likeSUPERFAMILY51717Dihydropteroate synthetase-likecoord: 47..268
IPR0045884-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-typeTIGRFAMTIGR00612TIGR00612coord: 39..413
e-value: 2.0E-150
score: 498.9
IPR0045884-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-typePFAMPF04551GcpEcoord: 42..414
e-value: 7.9E-140
score: 465.9
IPR0045884-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-typePANTHERPTHR304544-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASEcoord: 37..422
IPR0045884-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-typeHAMAPMF_00159IspGcoord: 37..418
score: 39.256531
IPR045854Nitrite and sulphite reductase 4Fe-4S domain-like superfamilyGENE3D3.30.413.10Sulfite Reductase Hemoprotein, domain 1coord: 323..418
e-value: 2.1E-28
score: 100.1
IPR045854Nitrite and sulphite reductase 4Fe-4S domain-like superfamilySUPERFAMILY56014Nitrite and sulphite reductase 4Fe-4S domain-likecoord: 326..413
IPR0171784-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypicalPIRSFPIRSF037336IspG_partdupcoord: 12..314
e-value: 2.6E-123
score: 410.8
coord: 311..423
e-value: 2.4E-50
score: 169.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_177_length_40581_cov_4.324031contigNODE_177_length_40581_cov_4.324031:27419..28726 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9900.t1Gcaud9900.t1Gracilaria caudata M_176_S67 malemRNANODE_177_length_40581_cov_4.324031 27419..28726 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9900.t1 ID=Gcaud9900.t1|Name=Gcaud9900.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=436bp
MHDGPARPPPPAHLVKDKSFMSDQAGIAGLDIESGAIQRRPTRVVPVGDI
LIGGGNPVVVQSMINEDTLDVDNAVNSIREMHEAGCEIVRVTCVSMAHAH
AVGFIKQKLRAEYKDVPLVADVHHNGLKIALEVAKHVDKVRINPGLYVFE
KPDINRTEYTDEEFETAKNKLRDTLKPLIISLRDQNKALRIGVNHGSLSE
RMLFTYGDTPRGMVESALECIRVCEDLDFHNIVISMKASKVLVMLAAYRM
LAKRLDAEGMNYPLHLGVTEAGDGEYGRIKSTLGIGTLLAEGLGDTIRVS
LTEAPIKEIPVCYGILQGLGLRRTMVEYVACPSCGRTLFNLETVLHEVRE
ATKHMPGLSIAVMGCIVNGPGEMADADYGYVGKQPGYISLYRGRKEIRTV
PETEGVQQLIALLKEDGVWVEPAVLAEKTLVAESV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011005Dihydropteroate_synth-like
IPR004588IspG_bac-typ
IPR045854NO2/SO3_Rdtase_4Fe4S_sf
IPR017178IspG_atypical