Gcaud9890.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9890.t1
Unique NameGcaud9890.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length383
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud9890.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR044927Type VII secretion system protein EssD-likePFAMPF13930Endonuclea_NS_2coord: 158..246
e-value: 4.5E-7
score: 30.2
IPR044929DNA/RNA non-specific endonuclease superfamilyGENE3D3.40.570.10Extracellular Endonuclease, subunit Acoord: 134..282
e-value: 1.9E-12
score: 48.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..383
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..383
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..50
NoneNo IPR availableTMHMMTMhelixcoord: 28..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_177_length_40581_cov_4.324031contigNODE_177_length_40581_cov_4.324031:130..1278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9890.t1Gcaud9890.t1Gracilaria caudata M_176_S67 malemRNANODE_177_length_40581_cov_4.324031 130..1278 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9890.t1 ID=Gcaud9890.t1|Name=Gcaud9890.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=383bp
MQFTLPPDLPEQKFPLVTNSKGMLVGALLQRLSICLAVGVLYTVIALYAL
AQVYNVKLRDVGSIDSLVKYLQSVFQTTPIPSKSDNNFERRYPVSEDDYK
YQDCLQRNGVTLIYGPILNPKASFKDWKASSVRATFRAVKSKKGEDLAEC
GKMAYNYDRPPGWLGPGTKCTRGHLLGKQLGGNGLNTRNIVMLFNSANSP
VMSGWENIIAEFRKKMLVNSSRSGVIDYVVKAEYCARRETPAALWMETWF
TASKNDERFEWLKILVPNERDVKAFIYMDNTLKLGFGQPLINPNHNAIIS
GALARSATPERDGDSWKKYPGRLIALAKRNTKRTRKWRRRQELTLVAVKS
LTEGSPCTWERLGNTTNDTPNTGEMRKGTRAFP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR044927Endonuclea_NS_2
IPR044929DNA/RNA_non-sp_Endonuclease_sf