Gcaud9882.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9882.t1
Unique NameGcaud9882.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length675
Homology
BLAST of Gcaud9882.t1 vs. uniprot
Match: A0A2V3IT96_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT96_9FLOR)

HSP 1 Score: 887 bits (2291), Expect = 0.000e+0
Identity = 446/627 (71.13%), Postives = 522/627 (83.25%), Query Frame = 0
Query:    1 MVGRYRGLRAELSTILAVDEYAQRPAERDVPPPNESISAHLGHLITRATEHPDEARTVYAYLPSIMLRIFGFAPGQGWLETCSELPSRDRDALVSIVLPDGPLHTFCKKHTRPRSKGIDFVHDMRFEFPRHNLPTLTNHALDDQDLSPRTSRSCLAPLLVPAMRNDTDDVIFLSPLDYFFICMIASPTLKYVNAPGSSTVKIPKRSRSIPSIRAQYNQVISAYAALRDPSAKVDSNDIFIPTCLDYLIIPWITATPTEIPYLSTSTADAITALLLALPPASPKDLDLTAES--CTLATNRVMDNRQLTNSGALYRFIPSMLDAVFSNYDSAAPIFPLIAYIRVLSMLIAPWRNSIRSVASQMLLPKPKPNKNAQANRSPSMAALSSTLSSINAHLPSPTASPGNATSVKEGKWRNGFEQRHTNCDKTLLRSAVILAASMHVASSTDGVRVLSLLTDAAQAARFHSLTVPEEDPDRMEELQLCLDALRDQKSQLQRKNGHREKNFIPILAANLGDKPSNGGVFRGISEIVGVGSGKVVSAANGGSSSSTKRRLKDFRDNWMGSARGEEVPFIGGVWDKPISGSESEMLVLLAYWLALRVEPRLGFLPDIRFLGQYWVWGLIALVCLAS 625
            M  RYRGLRAELSTILAVDE+AQRP ++D+PPPNE IS+HL +LI RAT HPDEARTVYAYLP+I+LRIFGFAPGQGWLETCSELPSRDRDALVSIVLPDGPLHTFCK+HTRPRS  IDF HDMRFEF R NLP LTN ALD   +    SRS LAPLL  ++RN  DDVIFLSPLDYF ICMIASPT K+VNAPGSS+VKIPKRSRSIPS+RAQYNQVI+AYAALR  +A VDS+DIFI  CLDYL IPWITA P+ +PYLSTS ADA+ +LLLAL P SPKDLDL  E+   TL  + ++D    TN G LYR   SML+ +FSN+D++APIFPL +YIRVL+MLIAPWR S+RS  S MLLPKPKP+K  + +R+ SMAALSSTLSSINAHLPS +ASPGNAT+V++ +WR     R T  DK LLR+AV+LAA+MHVAS  DG RV++LL DAAQ AR +S+T+P +DPDR+EELQLCLDALR Q+S+LQRKNG REKNFIPILA+NLGDK  NGGVF GISE+VGVGS +V+S  NG S S+TKRRLKDF++NWMG  R +EVPFIG VWD+PI+G+ESEM+V+ AYW+ALR+EPRLG+LP+ RFLGQYWVW + A++ + S
Sbjct:    1 MSRRYRGLRAELSTILAVDEFAQRPLQQDLPPPNEPISSHLANLILRATNHPDEARTVYAYLPAIILRIFGFAPGQGWLETCSELPSRDRDALVSIVLPDGPLHTFCKEHTRPRSTKIDFGHDMRFEFARRNLPPLTNAALDSDRIPTPGSRSYLAPLLASSLRNKADDVIFLSPLDYFVICMIASPTQKFVNAPGSSSVKIPKRSRSIPSLRAQYNQVITAYAALRSANASVDSDDIFILACLDYLFIPWITALPSNLPYLSTSAADAVASLLLALAPTSPKDLDLDLETDDSTLGNHYMVDIHLFTNCGVLYRLTASMLENLFSNFDASAPIFPLNSYIRVLAMLIAPWRQSVRSTVSLMLLPKPKPSKGKRPSRT-SMAALSSTLSSINAHLPS-SASPGNATAVRDSEWREQLRSRQTLIDKHLLRTAVVLAANMHVASVADGSRVMALLADAAQGARLYSITLPNDDPDRLEELQLCLDALRGQRSRLQRKNGSREKNFIPILASNLGDKTKNGGVFSGISEMVGVGSAQVLSQVNGESLSTTKRRLKDFKENWMGRGRSQEVPFIGSVWDRPIAGNESEMMVIFAYWIALRLEPRLGYLPNTRFLGQYWVWIMTAIIFVVS 625          
BLAST of Gcaud9882.t1 vs. uniprot
Match: R7Q4E9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4E9_CHOCR)

HSP 1 Score: 483 bits (1243), Expect = 7.180e-160
Identity = 257/603 (42.62%), Postives = 384/603 (63.68%), Query Frame = 0
Query:   33 PNESISAHLGHLITRATEHPDEARTVYAYLPSIMLRIFGFAPGQGWLETCSELPSRDRDALVSIVLPDGPLHTFCKKHTRPRSKGIDFVHDMRFEFPRHNLPTLTNHALDDQD----LSPRTS-RSCLAPLLVPAMRNDTDDVIFLSPLDYFFICMIASPTLKYVNAPGSSTVKIPKRSRSIPSIRAQYNQVISAYAALRDPSAKVDSNDIFIPTCLDYLIIPWITATPT-EIPYLSTSTADAITALLLALPPASPKDLDLTAESCTLATNRVMDNRQLTNSGALYRFIPSMLDAVFSNYDSAAPIFPLIAYIRVLSMLIAPWRNSIRSVASQMLLPKPKPNKNAQANRSPSMAALSSTLSSINAHLPSPTASPGNATSVKEGKWRNGFEQRHTNCDKTLLRSAVILAASMHVASSTDGVRVLSLLTDAAQAARFHSL-TVPEEDPDRMEELQLCLDALRDQKSQLQRKNGHREKNFIPILAANLGDKPSNGGVFRGISEIVGVGSGKVVSAANGGSSSSTKRRLKDFRDNWMGSARG---EEVPFIGGVWDKPISGSESEMLVLLAYWLALRVEPRLGFLPDIRFLGQYWVWGLIALVCLAS 625
            P E  + HL  LI  +  HPD+ R VY +LP +MLR+FG+  G GWLET SELPS+DRDAL+   +P GP+ T+C++++ PR   ++F  DMRFEFP  +LP  T  AL +      + P T  +S LAP L  ++++  +  ++LSP+DYF+ICM+ASPT K+  + G +  +  +RS S+PS RA YN+ I++YA+  + + +V  N +F+ TCLD+L +PW +  P+ E P  ST+ A+++T++LLAL PA+P  LDL  +   +     +D R  TN+ A+YR    ML+ V  +Y+  A + PL+AY+R+L++ IAPWR SIR+  S  L PK K + +   +R+PSMAA++STLSSINAHL SP+ SPGNA+SVKE +WR   ++R  + D  LLR A++ AA     +  +G RVL++L +AAQAAR     +  E D D+ EEL+ CL ALR+Q ++ +R +  RE+++I  LAA++G +  +G                     N  S S   + LK+ R   +   R    E VPF+G VWD+PI+  E+E++V+  YWLALR+EPRLG++P++RFLG+YW+  L+++V   S
Sbjct:   11 PTEPTTTHLAQLILASFSHPDDIRIVYEFLPLLMLRVFGYRQGHGWLETASELPSKDRDALIRFTMPGGPIDTYCRRNSPPRDAAVNFDVDMRFEFPVSSLPLATRDALREGPSAALVRPITDGQSFLAPFLFSSLKDTDEKNVYLSPIDYFYICMVASPTRKWAPSSGQNPARRVRRSASLPSTRALYNRTIASYASALNGTDRVGPNSLFLATCLDFLFMPWASYRPSSEPPVASTNAAESVTSILLALAPAAPSALDLDLDFHPMDVPDELDWRIQTNTSAVYRAAEKMLENVLKHYEPEASLGPLVAYMRILALYIAPWRASIRNGLSACLFPKKKTSSSRSNHRTPSMAAITSTLSSINAHLASPSGSPGNASSVKESQWRTELKERQRSVDDELLRLAIVKAAHRRFPAFPEGSRVLAVLAEAAQAARLAGTWSSRERDMDKAEELKNCLLALRNQIAESERSSARRERSYIGTLAASVGIRLESGVXXXXXXXXXXXXXXXXXXVVNMLSGSPHGKNLKELRQRRLSVFRTSDEESVPFLGNVWDRPIAEGENEVVVVWLYWLALRLEPRLGYVPNLRFLGRYWILLLLSIVVCCS 613          
BLAST of Gcaud9882.t1 vs. uniprot
Match: A0A7S2ZQ50_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZQ50_9RHOD)

HSP 1 Score: 128 bits (321), Expect = 4.010e-27
Identity = 170/668 (25.45%), Postives = 277/668 (41.47%), Query Frame = 0
Query:   41 LGHLITRATEHPDEARTVYAYLPSIMLRIFGFAPGQGWLETCSELPSRDRDALVSIVLPDGPLHTFCKKHTRPRSKGIDFVHDMRFEFPRHNLPTLTNHAL--------------DDQDLSPRTSRSC-LAPLLVPAMRNDTD---------------------DVIFLSPLDYFFICMIASPTLKYVNAPGSSTVKIPKRSRS--IPSIRAQYNQVISAYAALRDPSAKVDS-------NDIFIPTCLDYLIIPWITATPTEIPYLSTSTADAITALLLALPPASPKD----LDLTAESCTLATNRVMDNRQLTNSGAL----------YRFIPSMLDAVFSNYDSAAPIFPLIAYIRVLSMLIAPWRNSIRSVASQMLLPKPKPNKNAQANRSPSMAALSSTLSS-INAHLPSPTASPGNATSVKE-GKWRNGFEQRHTNCDKT-LLRSAVILAASMHVASSTDGVRVLSLLTDA--------AQAARFHSLTVPEEDPDRMEELQLCLDALRDQKSQLQRKNGHREKNF------IPILAANLGDKPSNGGVFRGISEIVGVGSGKVVSAANGGSSSSTKRRL-----KDFRDNWMGSARGE------EVPFIGGVWDKPISGSESEMLVLLAYWLALRVEPRLGFLPDIRFLGQYWVWGLIALV 621
            LG  + R     +E R VY   P +ML+IFGF   +GWLE  S + S+DRDA++ ++LP+GPLH      T P         +  FEFP  NLP  T + +              D  +L P  S++    P +   +  D D                      ++ LS  +YF +CM +SP  +     GSS +   +R+RS  +PS RA +N + S+YA    P    D          +F+   L++     +++        ++ T DA+T L L + P +P +    L   AE   L     + + QLT S  L           R++ +  + ++S   ++     LI+++R  S+ I PW    RS+A +  LP+   ++   A+   ++  L  ++   IN    S  +  G  +   + G+W       H + + T +L      AA + + ++ DG  +L LL++A        A A+   + + P    D    L+     L  Q S   R++ H   NF      +  LA  LG   S  G   G   + G   G +      G++S   R++     +D        A G+      +V FIGG WD P    E   L+   Y L++ +  R     ++RFL  Y   G I +V
Sbjct:   63 LGFALGRVISGEEEFRPVYEGFPRLMLKIFGFGD-EGWLEDASRVQSKDRDAVLKVLLPNGPLHRLVCA-TAP---------EYTFEFPVSNLPLSTQNDINTIRQQHPIPGSESDRTNLDPYLSQNGKYLPRVSAGVLGDRDPSQLNSSLLSWFCWMRLSNSGSLLTLSCYEYFLLCMCSSPLWR--GRSGSSGMSGRRRTRSSLLPSRRAVFNYLFSSYANFFAPKDHSDRAGQGPAYGKLFLAASLEFFCRAPLSSNDPP----TSGTMDALTILALHVQPRTPLEATEALPKRAELYALRNGPKLADPQLTGSIGLATMRKSVASELRYLGAEAEGLWSASSTSGSAV-LISFMRSTSLFIVPWNQHARSLAEKRTLPRRSRSRGVAAS---ALEYLPPSIGDRINDLQDSAASRVGRDSGELDIGEWAEVIS--HLDLEITYVLPRFTERAAKLSLGATEDGSHLLELLSEAFSPRPIANALASARSTFSGPWYSSDSESNLR----ELATQISSYMRQSHHAVDNFTHKRTDLNGLACALGVALSIPGA--GSYTLQGFQRGLLDRGRKAGNASERVRKVLEPEHEDVEVMRKQVALGQRKFSNRDVEFIGGPWDLPPFSYELASLLPPLYALSIEMSARFHVDVNLRFLASYHAIGTICVV 701          
BLAST of Gcaud9882.t1 vs. uniprot
Match: A0A7S1TDU4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDU4_9RHOD)

HSP 1 Score: 107 bits (266), Expect = 1.630e-20
Identity = 158/621 (25.44%), Postives = 254/621 (40.90%), Query Frame = 0
Query:   79 LETCSELPSRDRDALVSIVLPDGPLHTFCKKHTRPRSKGIDFVHDMRFEFPRHNLPTLTNHALDD-------------QDLSPRTSRS--CLAPLLVPAMRNDTDDVIFLSPLDYFFICMIASPTLKYVNAPGSSTVKIPKRSRSIPSIRAQYNQVISAYAAL---RDPSAKVDSNDIFIPTCLDYLIIPWITATPTE--IPYLSTSTA----------DAITALLLALPPASPKDLDLTAESCTLATNRVMDNRQLTNSGALYR---FIPSMLDAVFS--------NYDSAAPIFPLIAYIRVLSMLIAPWRNSIRSVASQMLLPKPKPNKNAQANRSPSMAALSS--TLSSINAHLPSPTASPGNATSVKEGKWRNGFEQ---RHTNCDKTLLRSAVILAASMHVASSTDGVRVLSLLTD------AAQAARFHSLTVPEEDP-DRMEELQLCLDALRDQ----------KSQLQRKNGHREKNFIPILAANLGDKP-SNGGVFRGISEIVGVGSGKVVSAANGGSSSSTKRRLKDFRDNW-----MGSA----RGEEVPFIGGVWDKPISGSESEMLVLLAYWLALRVEPRLGFLPDIRFLGQY-WVWGLIALVCLAS 625
            +E  +E P+R+R+ALV +  P G +              + +  D  FE+P +N P     A++              QD+S         L    +P +       I +S  +Y  +C++A+   K   +    T K P+RS S+PS RA YNQ+IS Y       D S   D  ++F     DY I  W+   P+   +P    S A          DAI  L + L P SP D    A       N +  +   T+S  L R    +  +L   FS        N +S A     IA +R  ++ +APW            LPK + +    ++RS   A L    T  S+   +P           V+E +    +E+   R  +   T L +A+  AA + + S  +G  VLS L        AA+  R    TV E       E+L   L +L  Q            +  R  G   ++  P+    LG  P + G     + +I+  G+ K  S A+       ++ L++ R +      +GS+       +V F+GGVW++P+   E   LV+LAY L++ +E R     ++RFLG + ++  L+ L+ +A+
Sbjct:    1 MEDFAERPNREREALVHLFGPSGSIF----------QSALAYCADCYFEYPLNNFPDNLQLAIERILVGGSSREGGTVQDVSELGEEPDPWLLSFCLPRVGGLVTSSITVSSAEYVVLCLVANAFWKPQPSQSMYTSKKPRRSSSLPSRRALYNQLISLYMTYFWPSDDSEPSDLGELFTRAVADYWI-GWMVTNPSRDILPRRRGSAATFSPPTVEVADAICRLCVTLCPLSPGD---DAIMHAFQANGLGSSPYSTSSVTLPRARALLQPLLRRAFSDCFQCWPANRNSTA----FIAMLRAFNVFVAPWSRRACYAVQDKTLPKDRSSSARTSSRSVVRAVLEQIPTFQSLGHAIP----------PVEEARLFREWEEFLWRRKDLYLTDLPNALTRAAILRIGSIPEGGDVLSTLAGSFKLEAAAELIRRSVRTVYETGVLPNSEDLSSALVSLASQIDDSLYKGASSVESLRARGPNSQDLQPLCIL-LGLPPLARGAGSTRLHQIMTSGAWK--SRAD---HEDARKALQELRRSVEPPQSLGSSGAVYSNRDVSFVGGVWERPLRSDEIRPLVMLAYRLSIFLENRFHRPFNLRFLGSFVFLLWLVVLILIAA 587          
BLAST of Gcaud9882.t1 vs. uniprot
Match: A0A7S1TDQ0_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDQ0_9RHOD)

HSP 1 Score: 80.9 bits (198), Expect = 2.250e-13
Identity = 61/221 (27.60%), Postives = 96/221 (43.44%), Query Frame = 0
Query:   54 EARTVYAYLPSIMLRIFGFAPGQGWLETCSELPSRDRDALVSIVLPDGPLHTFCKKHTRPRSKGIDFVHDMRFEFPRHNLPTLTNHALDD-------------QDLSPRTSRS--CLAPLLVPAMRNDTDDVIFLSPLDYFFICMIASPTLKYVNAPGSSTVKIPKRSRSIPSIRAQYNQVISAYAAL---RDPSAKVDSNDIFIPTCLDYLIIPWITATP 256
            + R +   LP +M+++ GF    GW+E  +E P+R+R+ALV +  P G +              + +  D  FE+P +N P     A++              QD+S         L    +P +       I +S  +Y  +C++A+   K   +    T K P+RS S+PS RA YNQ+IS Y       D S   D  ++F     DY I  W+   P
Sbjct:   37 DVRLLKEQLPGLMVQVLGFGQ-DGWMEDFAERPNREREALVHLFGPSGSIF----------QSALAYCADCYFEYPLNNFPDNLQLAIERILVGGSSREGGTVQDVSELGEEPDPWLLSFCLPRVGGLVTSSITVSSAEYVVLCLVANAFWKPQPSQSMYTSKKPRRSSSLPSRRALYNQLISLYMTYFWPSDDSEPSDLGELFTRAVADYWI-GWMITNP 245          
The following BLAST results are available for this feature:
BLAST of Gcaud9882.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IT96_9FLOR0.000e+071.13Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q4E9_CHOCR7.180e-16042.62Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2ZQ50_9RHOD4.010e-2725.45Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S1TDU4_9RHOD1.630e-2025.44Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1TDQ0_9RHOD2.250e-1327.60Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 474..501
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_428_length_25911_cov_4.217002contigNODE_428_length_25911_cov_4.217002:4161..7248 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9882.t1Gcaud9882.t1Gracilaria caudata M_176_S67 malemRNANODE_428_length_25911_cov_4.217002 4161..7248 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9882.t1 ID=Gcaud9882.t1|Name=Gcaud9882.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=675bp
MVGRYRGLRAELSTILAVDEYAQRPAERDVPPPNESISAHLGHLITRATE
HPDEARTVYAYLPSIMLRIFGFAPGQGWLETCSELPSRDRDALVSIVLPD
GPLHTFCKKHTRPRSKGIDFVHDMRFEFPRHNLPTLTNHALDDQDLSPRT
SRSCLAPLLVPAMRNDTDDVIFLSPLDYFFICMIASPTLKYVNAPGSSTV
KIPKRSRSIPSIRAQYNQVISAYAALRDPSAKVDSNDIFIPTCLDYLIIP
WITATPTEIPYLSTSTADAITALLLALPPASPKDLDLTAESCTLATNRVM
DNRQLTNSGALYRFIPSMLDAVFSNYDSAAPIFPLIAYIRVLSMLIAPWR
NSIRSVASQMLLPKPKPNKNAQANRSPSMAALSSTLSSINAHLPSPTASP
GNATSVKEGKWRNGFEQRHTNCDKTLLRSAVILAASMHVASSTDGVRVLS
LLTDAAQAARFHSLTVPEEDPDRMEELQLCLDALRDQKSQLQRKNGHREK
NFIPILAANLGDKPSNGGVFRGISEIVGVGSGKVVSAANGGSSSSTKRRL
KDFRDNWMGSARGEEVPFIGGVWDKPISGSESEMLVLLAYWLALRVEPRL
GFLPDIRFLGQYWVWGLIALVCLASDNDNLYRKPLQLTRAKVLGVVGPSV
GDVPLLWKGKSSSRDLKVTTFFEP*
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