Gcaud9879.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9879.t1
Unique NameGcaud9879.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length396
Homology
BLAST of Gcaud9879.t1 vs. uniprot
Match: A0A2V3IKV2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKV2_9FLOR)

HSP 1 Score: 603 bits (1554), Expect = 1.230e-214
Identity = 280/388 (72.16%), Postives = 332/388 (85.57%), Query Frame = 0
Query:    8 HPPMPFTIREALHGNQGLEPCVQNLSHKWNLVVLQRLRRFEPIIDRPKQAVQHLFELFILHVCQLDISYDFKWVDDLVKYLAAKAQHLIRPVTPEYSVQWGAAVYDERGKIVQYMPQKEESYPKCEYVNSREIVDIISRYTQTFTETDISKEELSRMPGLMDEPAKTAIMVYAWYLKCYQIKNGWLRPYLNAPLGRRERNRSVPLSSRGGALIADGRLGRIGEELHTLYALAFLDSRGHLTWYTVRQATRGEIIGCLACSYARGNNVRIHSSKDFRHSIQIRYDHICNFEVLDFRLWESWTHNLRSNGPCKSMGSRRRTLRAVRFNEPVVLEDALAVGFRIVNGVLVNPKGRPMRVVKRRDGLFRVHRQRLRPISKDRIPWHPRMRLV 395
            HP MPFTIREAL+GN GLEPCV+ +SH+W   VL+RLR FEPIIDRPKQA+ HLFELFILHVCQL  +Y+  WV+DLV+YL+A +QHLIRPV P+ SVQW AA+YDERG+I +Y+PQ+EE YPK E + + +IVDIISRYT++F E DI++EELSRM GLMDEPAKTA+MVYAWYL  Y+IKNGWLRP+LN+PLGRRER+R VP +SR    IA GRLGR  E LHTLYALAF+D+RGHL WYT+R+ATRGEIIG LACSYARGNN RI+SSKD R SIQIRYDH+CNFEVLDFRLW+SWTHN RS GPCKSMG ++ +LRAVRF+E V+LEDALAVG+RIV GVL+NPKG+P++V +RRDGLFR  R+ LR + K+ I WHPRMRLV
Sbjct:   17 HPQMPFTIREALYGNSGLEPCVRQISHEWEPTVLRRLRLFEPIIDRPKQAIHHLFELFILHVCQLSAAYNRGWVEDLVQYLSAISQHLIRPVQPDKSVQWAAAIYDERGRIRRYIPQREECYPKSESIEAAQIVDIISRYTRSFMEPDITREELSRMSGLMDEPAKTAVMVYAWYLNTYRIKNGWLRPFLNSPLGRRERDRRVPEASRRNGYIAGGRLGRAREALHTLYALAFIDTRGHLVWYTIRRATRGEIIGSLACSYARGNNCRINSSKDVRKSIQIRYDHVCNFEVLDFRLWDSWTHNFRSTGPCKSMGRQKLSLRAVRFDEAVILEDALAVGYRIVQGVLINPKGKPIQVARRRDGLFRARRKFLRSVEKEPIDWHPRMRLV 404          
BLAST of Gcaud9879.t1 vs. uniprot
Match: R7QTB6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTB6_CHOCR)

HSP 1 Score: 282 bits (722), Expect = 1.200e-89
Identity = 142/268 (52.99%), Postives = 186/268 (69.40%), Query Frame = 0
Query:  127 ESYPKCEYVNSREIVDIISRYTQTFTETDISKEELSRMPGLMDEPAKTAIMVYAWYLKCYQIKNGWLRPYLNAPLGRRERNRSVPLSS--RGGALIADGRLGRIGEELHTLYALAFLDSRGHLTWYTVRQATRGEIIGCLACSYARGNNVRIHSSKDFRHSIQIRYDHICNFEVLDFRLWESWTHNLRSNGPCKSMGSRRRTLRAVRFNEPVVLEDALAVGFRIVNGVLVNPKGRPMRVVKRRDGLFRVHRQRLRPISKDRIPWHPRM 392
            +SYP+   V+S+ I++I+S Y  +FTE DISK E++ M GLMDEPAKTA++VYAW+L    I+NGWLR  LN+ LGRRER R+ P S   RGG     GRLGR+ EE HT+++  F++  GHL WYTVRQA RGEIIG  ACSYARGNNVR+  SKD   S++I +  ICN E LDFRLWESW+H++R++GP  S+G    + R V+F+EPV LEDALAVGFR+V+  LV+P G+ + V +R+DG +      L       + W   M
Sbjct:   58 KSYPRNLPVDSKLIINILSSYASSFTEPDISKLEIASMTGLMDEPAKTAVIVYAWFLASLDIRNGWLRKMLNSDLGRRERPRTAPPSQKPRGG-----GRLGRLSEEPHTIFSNPFINRIGHLVWYTVRQAIRGEIIGGPACSYARGNNVRMQCSKDLAKSVRIHHSQICNLERLDFRLWESWSHSVRASGPYASLGCHALSARRVKFDEPVRLEDALAVGFRVVDDTLVSPNGKELVVSRRKDGFYSARSPILLSTEAGPVKWRAGM 320          
The following BLAST results are available for this feature:
BLAST of Gcaud9879.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IKV2_9FLOR1.230e-21472.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QTB6_CHOCR1.200e-8952.99Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_700_length_19386_cov_4.514641contigNODE_700_length_19386_cov_4.514641:15062..16249 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9879.t1Gcaud9879.t1Gracilaria caudata M_176_S67 malemRNANODE_700_length_19386_cov_4.514641 15062..16249 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9879.t1 ID=Gcaud9879.t1|Name=Gcaud9879.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=396bp
MEGRVASHPPMPFTIREALHGNQGLEPCVQNLSHKWNLVVLQRLRRFEPI
IDRPKQAVQHLFELFILHVCQLDISYDFKWVDDLVKYLAAKAQHLIRPVT
PEYSVQWGAAVYDERGKIVQYMPQKEESYPKCEYVNSREIVDIISRYTQT
FTETDISKEELSRMPGLMDEPAKTAIMVYAWYLKCYQIKNGWLRPYLNAP
LGRRERNRSVPLSSRGGALIADGRLGRIGEELHTLYALAFLDSRGHLTWY
TVRQATRGEIIGCLACSYARGNNVRIHSSKDFRHSIQIRYDHICNFEVLD
FRLWESWTHNLRSNGPCKSMGSRRRTLRAVRFNEPVVLEDALAVGFRIVN
GVLVNPKGRPMRVVKRRDGLFRVHRQRLRPISKDRIPWHPRMRLV*
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