Gcaud9873.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9873.t1
Unique NameGcaud9873.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length573
Homology
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BLAST of Gcaud9873.t1 vs. uniprot
Match: A0A2V3IKR0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKR0_9FLOR)

HSP 1 Score: 182 bits (462), Expect = 2.790e-48
Identity = 123/402 (30.60%), Postives = 212/402 (52.74%), Query Frame = 0 
Query:  179 IDKKGRSGMMIARITEEGSIKWHKIVRDRGLDNCLSTSALKEGSSAYVVGVMNGGSDNTSMYVMKMDRETGETEWTKELTDRNYVLTSGDIMA-KKGVYVTALEADPKGKRTNVVVHKLGEGTGILLWSKVGKHADRVHGLSLFGKSGLVYASYNSSGVRISSTSPSSTDRLLGDAEHEKETWVQPQE--AIISEVV--DTALGRGQAAILWRNSEGGNLIQM--VSFDGIRGAGRTGG-VITRVKTKLKLDLPTTAEATVKAGICDILGDAMQGKARIENDGLMVTGTVSKFEAEMVIRKTMEDRDNDGRSYVETRLGIGKRSVLLEGELMTTEARDVHDRPTRRERKRVTLSGQVNETGGRRSVVAEASESKW-WTWWKILIAAVGGIGVMVAIWLVVRR 571
            ++++G +G+ ++ +T+ G   W K ++  GL +CL     K   S  VVG +   + N S+ V+K+  + G+  W   L+DRNY LT G+++  +KGV+V AL  +      +V +HKLG  TG+ LW K G+       +SL G+  ++  +     V ++     + + +LG+ E E+   VQ  E  A   E++  D  +G+  AA      +GG LI +  +  D  +     G  V  RVK  L ++   + +  V+ GI ++  DA++G+AR++   L+  G ++K EA  +I+  +EDR  DGRSY+E +LG+ KR+VLL G++   EAR +   P + +   +    +    G  +S+ AE S+    W WWK++   +G +G++  I  V  R
Sbjct:    2 VNEQGSTGLHVSYVTKYGFETWSKEIKMDGLKSCLGIDGTKNKRSVTVVGGLEHATKNNSIVVVKVGGKYGDIIWQTTLSDRNYSLTHGEVVTHRKGVFV-ALAEESADNGFHVYIHKLGTQTGVKLWCKGGQEVAGFGAISLHGRDEVIVGTLKKGEVSLNVFGSYNAENVLGEGELER---VQSSEESAGDEEILHSDVCIGKVNAAFTRETVQGGKLIGITPLRIDEQKRTEELGSDVRVRVKANLIVNAAESDKKGVETGISEVAADAIKGRARMKRGFLLANGRLTKAEATTIIKVILEDRGVDGRSYMERKLGLSKRTVLLHGDVAVLEARAL---PPQNQNGGMGKRNRSASEGNAQSLTAEVSDKSGNWAWWKVVTMTLGLLGMVGLIMFVALR 396
The following BLAST results are available for this feature:
BLAST of Gcaud9873.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IKR0_9FLOR2.790e-4830.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 30..368
e-value: 1.7E-11
score: 45.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 570..572
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..544
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 545..569
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availableTMHMMTMhelixcoord: 545..567
NoneNo IPR availableTMHMMTMhelixcoord: 5..22
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 55..342

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_700_length_19386_cov_4.514641contigNODE_700_length_19386_cov_4.514641:1401..3119 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9873.t1Gcaud9873.t1Gracilaria caudata M_176_S67 malemRNANODE_700_length_19386_cov_4.514641 1401..3119 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9873.t1 ID=Gcaud9873.t1|Name=Gcaud9873.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=573bp
MFLRGIWILIYLFLAALLTYSTQGYPQRFGRKQWVKSYAKLTGQIWFSIT
KGRRDGALYCSGKLEDAHGSSVLCLDANKKDSQEENENRYANGVICKLNP
RNGKEKWCARTCEEGVPLLSVVTSGKKVVYAAGLTNSKDTVLYTIEKKNG
RQKMQVLVPGQVFKMDHNPDGIYVCGSGIDKKGRSGMMIARITEEGSIKW
HKIVRDRGLDNCLSTSALKEGSSAYVVGVMNGGSDNTSMYVMKMDRETGE
TEWTKELTDRNYVLTSGDIMAKKGVYVTALEADPKGKRTNVVVHKLGEGT
GILLWSKVGKHADRVHGLSLFGKSGLVYASYNSSGVRISSTSPSSTDRLL
GDAEHEKETWVQPQEAIISEVVDTALGRGQAAILWRNSEGGNLIQMVSFD
GIRGAGRTGGVITRVKTKLKLDLPTTAEATVKAGICDILGDAMQGKARIE
NDGLMVTGTVSKFEAEMVIRKTMEDRDNDGRSYVETRLGIGKRSVLLEGE
LMTTEARDVHDRPTRRERKRVTLSGQVNETGGRRSVVAEASESKWWTWWK
ILIAAVGGIGVMVAIWLVVRRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR011047Quinoprotein_ADH-like_supfam