Gcaud9872.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9872.t1
Unique NameGcaud9872.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length273
Homology
BLAST of Gcaud9872.t1 vs. uniprot
Match: A0A2V3J1I1_9FLOR (Methyltransferase-like protein 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1I1_9FLOR)

HSP 1 Score: 231 bits (588), Expect = 2.530e-69
Identity = 153/205 (74.63%), Postives = 161/205 (78.54%), Query Frame = 0
Query:    1 LSLLSNPPSLSVASPVSLALSTSVTPAPFSP-KRKPIRSAVEEARLRAQREAETFAESRRPRRDRAVTRPPE---LSWGDVPAAKRLRSDDTPR----NSDRDQPLV-RTGDESEAEKQQRYKRRLDMNRESAAVSRVRRRAYVKELEERLAAVEAEKLQLEGKLEIMMSQNESFKKQLEHLFMMVAGQRRP----SPFATSPST 192
            LSLLSNP SLSVASPVSLALST    APFSP KRK +RSAVEEARLRAQREAE FAESRRPRR  A TR P    + W    + KR+R DD       +SDRDQP   +TGDESE EKQQRYKRRLDMNRESAAVSRVRRRAYVKELEERLA VEAEKLQLEGKLEIMMSQNESFKKQLEHLF+MVA  RRP    SP +  PST
Sbjct:  250 LSLLSNPSSLSVASPVSLALSTPAV-APFSPPKRKALRSAVEEARLRAQREAEHFAESRRPRRQSARTRRPSDSTVQWEQEHSPKRMRVDDNHSARGPSSDRDQPSASKTGDESENEKQQRYKRRLDMNRESAAVSRVRRRAYVKELEERLAIVEAEKLQLEGKLEIMMSQNESFKKQLEHLFLMVASGRRPTFNPSPSSLQPST 453          
BLAST of Gcaud9872.t1 vs. uniprot
Match: A0A2V3IJ44_9FLOR (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ44_9FLOR)

HSP 1 Score: 68.2 bits (165), Expect = 1.460e-9
Identity = 55/136 (40.44%), Postives = 80/136 (58.82%), Query Frame = 0
Query:   38 SAVEEARLRAQREAETFAESRRPRRDRAVTRPPELSWGDVPAAKRLRSDDTPRNSDRDQPLVRTGDESEAEKQQRYKRRLDMNRESAAVSRVRRRAYVKELEERLAAVEAEKLQLEGKLEIMMSQNESFKKQLEHL 173
            +AV+EA++RA+ +AE+FA++R+ +R    T        D   A    S+D  R +            +E  K++RY+RRL +NRESAAVSRVRRR YVK LEE+L   E E+++L  +LE M  Q+   K  L +L
Sbjct:  206 NAVQEAQVRARMKAESFAKARKRKRAEHPT--------DAEKAVEKISEDDARLT------------AEQLKRKRYERRLALNRESAAVSRVRRREYVKLLEEQLVNAEKERVRLATELEDMQKQHNKLKDHLRNL 321          
BLAST of Gcaud9872.t1 vs. uniprot
Match: R7Q798_CHOCR (BZIP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q798_CHOCR)

HSP 1 Score: 68.2 bits (165), Expect = 2.760e-9
Identity = 54/149 (36.24%), Postives = 82/149 (55.03%), Query Frame = 0
Query:   36 IRSAVEEARLRAQREAETFAESRRPRRDRAVTRPPELSWGDVPAAKRLRSDDTPRNSDRDQPLVRTGDESEAEKQQRYKRRLDMNRESAAVSRVRRRAYVKELEERLAAVEAEKLQLEGKLEIMMSQNESFKKQLEHLFMMVAGQRRPS 184
            + SAV EA++RA+ +AETFA++R+ +R   +                   +   + +D D  L      +E  +++RY RRL +NRESAAVSRVRRR YVK LEE+L   E ++++L   L  M  Q+   +K L HL  +V  +  P+
Sbjct:  573 VSSAVHEAQVRARMKAETFAKNRKRKRPGPI-----------------EEEKPEKTTDEDSKLS-----TEDLRKKRYLRRLALNRESAAVSRVRRREYVKLLEEQLVNAEKQRVKLANDLSAMQVQHSELRKHLVHLEEVVRKRSGPA 699          
BLAST of Gcaud9872.t1 vs. uniprot
Match: A0A2V3ISJ4_9FLOR (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISJ4_9FLOR)

HSP 1 Score: 60.5 bits (145), Expect = 6.380e-7
Identity = 51/136 (37.50%), Postives = 75/136 (55.15%), Query Frame = 0
Query:   38 SAVEEARLRAQREAETFAESRRPRRDRAVTRPPELSWGDVPAAKRLRSDDTPRNSDRDQPLVRTGDESEAEKQQRYKRRLDMNRESAAVSRVRRRAYVKELEERLAAVEAEKLQLEGKLEIMMSQNESFKKQLEHL 173
            +AV EA++RA+ +AE+FA +R+                    AKR +S     N+ R     ++   +E  KQQ+Y+ RL +NRESAAVSRVRR+ YVK LEE+L   E E+++L  +L  M  Q    ++ L  L
Sbjct:  216 NAVHEAQIRARMKAESFALARKKEN-----------------AKRRKS---AANTIRGTNQAKSNLTAEELKQQKYRNRLRLNRESAAVSRVRRKEYVKLLEEQLVNAEKERVRLAAELMDMQKQQNKLREHLTEL 331          
The following BLAST results are available for this feature:
BLAST of Gcaud9872.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J1I1_9FLOR2.530e-6974.63Methyltransferase-like protein 5 n=1 Tax=Gracilari... [more]
A0A2V3IJ44_9FLOR1.460e-940.44BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
R7Q798_CHOCR2.760e-936.24BZIP domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A2V3ISJ4_9FLOR6.380e-737.50BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 135..162
NoneNo IPR availableGENE3D1.20.5.170coord: 110..178
e-value: 1.3E-6
score: 30.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..245
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..272
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availableCDDcd14704bZIP_HY5-likecoord: 114..163
e-value: 5.61696E-9
score: 49.1098
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 113..170
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 108..172
e-value: 7.1E-7
score: 38.8
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 108..170
e-value: 8.6E-9
score: 35.4
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 110..173
score: 10.254435

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_3200_length_3849_cov_2.978446contigNODE_3200_length_3849_cov_2.978446:406..1449 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9872.t1Gcaud9872.t1Gracilaria caudata M_176_S67 malemRNANODE_3200_length_3849_cov_2.978446 406..1449 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9872.t1 ID=Gcaud9872.t1|Name=Gcaud9872.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=273bp
LSLLSNPPSLSVASPVSLALSTSVTPAPFSPKRKPIRSAVEEARLRAQRE
AETFAESRRPRRDRAVTRPPELSWGDVPAAKRLRSDDTPRNSDRDQPLVR
TGDESEAEKQQRYKRRLDMNRESAAVSRVRRRAYVKELEERLAAVEAEKL
QLEGKLEIMMSQNESFKKQLEHLFMMVAGQRRPSPFATSPSTGAAAPQST
LPAHAPSHPTLPGPSPRATNRAPSRTTHSSAGAHHHAPTAPHNSTDGIVQ
QKCALSGQLCAQQRAQRNLFLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP