Gcaud9863.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9863.t1
Unique NameGcaud9863.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length417
Homology
BLAST of Gcaud9863.t1 vs. uniprot
Match: A0A2V3J663_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J663_9FLOR)

HSP 1 Score: 380 bits (975), Expect = 2.550e-128
Identity = 199/272 (73.16%), Postives = 223/272 (81.99%), Query Frame = 0
Query:  145 HCRSPTTSPRXXXXXXXXXTPSHTENRIPPLNFQRLYTVNEPPLSKFIDPEDESMFPDMASLGLDCSPRANNTVVLPMPVDASCVEQFSFAFTGCGNSLRIDAPDRREALRGLLLDRTRKLSRTYEATVGALVRLCEQRYHNAKVKNIDGKLSSVDDCRNFVRAFAHEQSCGFGLEDDGLSSVDEVAQMMSRSNSVAMMLPERTAHCNAVNCFKALMDSSELEGFAEACMVELLAEDVMAVLAQQGHSEFDKDAGCRIPEAAIRPKAIPTPA 416
            H RSP +SP+  XXXXXXX        +PPL+  RL+TVNEPPLSKFIDPE ESMFPDMA LGLDCSPRANNTV+LPMP+DAS VEQFSFAF+GC NSL+IDAPDRREALRGL+LDRTR++SR YEATV AL RLCEQR+  A  +N   KLS VDDCRNFVRAFAHEQS G GLE DG+   +E  Q MS    VAMMLPERTAHCNA NCFKALMDSSELEGFAEACMVELLAEDV+A+LAQQGH++F+ +A CRI +A +  KAIPTPA
Sbjct:    3 HFRSPASSPKTTXXXXXXXXXXXXXXXVPPLHVPRLFTVNEPPLSKFIDPEHESMFPDMACLGLDCSPRANNTVLLPMPIDASSVEQFSFAFSGCSNSLKIDAPDRREALRGLVLDRTRRVSRAYEATVVALARLCEQRHLRATARNTTVKLSCVDDCRNFVRAFAHEQSSGIGLEYDGMDVCEETTQRMSTGMGVAMMLPERTAHCNAANCFKALMDSSELEGFAEACMVELLAEDVIAMLAQQGHTDFELEAACRIADAPMASKAIPTPA 274          
BLAST of Gcaud9863.t1 vs. uniprot
Match: R7QN20_CHOCR (GATA-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN20_CHOCR)

HSP 1 Score: 355 bits (912), Expect = 1.020e-115
Identity = 207/412 (50.24%), Postives = 267/412 (64.81%), Query Frame = 0
Query:    1 MGKIADPSLRLQCVHCHSTETPLWRAGPDGPKTLCNACGVRYKKGKLLLYKDDNGNLTAVQRHDAVPFHVPPTSKKTSRKL-----PSPASQ-----PASPDLSAKRSAIRKVPSEGAIAPPFGKKPRSRSRRANAGQLPGRYATKTLPDTMSQHCRSPTTSPRXXXXXXXXXTPSHTENRIPPLNFQRLYTVN----EPPLSKFIDPEDESMFPDMASLGLDCSPRANNTV-VLPMPVDASCVEQFSFAFTGCGN--SLRIDAPDRREALRGLLLDRTRKLSRTYEATVGALVRLCEQRYHNAKVKNIDGKLSSVDDCRNFVRAFAHEQSCGFGLEDDG-------LSSVDEVAQMMSRSNSVAMMLPERTAHCNAVNCFKALMDSSELEGFAEACMVELLAEDVMAVLAQ 388
            MGKIADP L+L+CVHC +TETPLWRAGPDGPKTLCNACGVRYKKGKL +++D +GNLTAV++ D +P HVPP  KK+++KL     P P S+     P+SP   A R  +RKVP+EG       KKPRSRSRR NAGQLPGRY++K+LPD ++Q   SP TSP+         +P+ +      + FQ     +    + PL    DP DE++FPD++ LG+D       TV +LPM  D S  EQFSFAF   GN  S+ I  PDR +ALRGL+LDRTRK+S  YE+TV  L RLCE+R   +   N +G+  +++DC+N+VR F+ EQ+ GF    +        LS  DE+        +   MLPE+TA+ +AV   KALMDSSEL GFAEACM+ELL EDV A L++
Sbjct:   61 MGKIADPLLKLRCVHCGNTETPLWRAGPDGPKTLCNACGVRYKKGKLTIFRDKDGNLTAVKQEDTLPVHVPPAPKKSNKKLQQHHAPDPPSKSDHSHPSSPSEPAVRRPVRKVPTEGVFTAALAKKPRSRSRRTNAGQLPGRYSSKSLPDDVAQW-HSPLTSPKSFSS-----SPAQSPRNDGGVCFQLARGASALKIDDPLPYHCDPSDEALFPDVSCLGIDSGDDDRTTVKLLPMDADPSSAEQFSFAFGELGNNASVNIGLPDRVKALRGLVLDRTRKVSARYESTVVGLCRLCEERCLRS-CSNGNGQPWTLEDCKNYVRWFSQEQTVGFVANKNSSCNPGISLSDSDEM------DITAGFMLPEKTAYTSAVENLKALMDSSELAGFAEACMIELLCEDVAAALSK 459          
BLAST of Gcaud9863.t1 vs. uniprot
Match: A0A6T6AV47_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6AV47_9RHOD)

HSP 1 Score: 80.1 bits (196), Expect = 1.420e-12
Identity = 34/49 (69.39%), Postives = 43/49 (87.76%), Query Frame = 0
Query:    1 MGKIADPSLRLQCVHCHSTETPLWRAGPDGPKTLCNACGVRYKKGKLLL 49
            M K ++P  RL+C +C+ TETPLWR+GP+GPKTLCNACGVR+KKGKL+L
Sbjct:    1 MAKGSNPE-RLRCSNCNKTETPLWRSGPEGPKTLCNACGVRWKKGKLVL 48          
BLAST of Gcaud9863.t1 vs. uniprot
Match: A0A843TML9_COLES (GATA-type domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843TML9_COLES)

HSP 1 Score: 77.0 bits (188), Expect = 7.180e-12
Identity = 46/103 (44.66%), Postives = 58/103 (56.31%), Query Frame = 0
Query:    5 ADPSLRLQCVHCHSTETPLWRAGPDGPKTLCNACGVRYKKGKLLL-YKDDNGNLTAVQRHDAVPFHVPPTS-KKTSRKLPSPASQPASPDLSAKRSAIRKVPS 105
            A P  R +C HC   ETP WRAGP+GPKTLCNACGVRYK G+LL  Y+  N    + + H      V     KK    LP+PA   AS  ++ K+  + + PS
Sbjct:  215 ASPRERRRCWHCEVEETPQWRAGPNGPKTLCNACGVRYKSGRLLPEYRPANSPTFSSRLHSNSHRKVMEMRRKKEVSVLPAPA---ASATMTKKKGLLAEWPS 314          
BLAST of Gcaud9863.t1 vs. uniprot
Match: A0A1D1Y699_9ARAE (GATA transcription factor 12 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Y699_9ARAE)

HSP 1 Score: 76.6 bits (187), Expect = 7.350e-12
Identity = 39/83 (46.99%), Postives = 48/83 (57.83%), Query Frame = 0
Query:    5 ADPSLRLQCVHCHSTETPLWRAGPDGPKTLCNACGVRYKKGKLLL-YKDDNGNLTAVQRHDAVPFHVPPTSKKTSRKLPSPAS 86
            A P  + +C HC + ETP WRAGP GPKTLCNACGVRYK G+LL  Y+  N    +   H      V    +K    LP+PA+
Sbjct:  223 AAPREKRRCWHCAAEETPQWRAGPQGPKTLCNACGVRYKSGRLLPEYRPANSPTFSGDVHSNSHRKVMEMRRKKEAHLPTPAA 305          
BLAST of Gcaud9863.t1 vs. uniprot
Match: A0A2V3IMZ4_9FLOR (GATA transcription factor 9 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMZ4_9FLOR)

HSP 1 Score: 75.5 bits (184), Expect = 1.040e-11
Identity = 29/34 (85.29%), Postives = 33/34 (97.06%), Query Frame = 0
Query:   11 LQCVHCHSTETPLWRAGPDGPKTLCNACGVRYKK 44
            ++CVHCH+TETPLWRAGP GPKTLCNACGVR+KK
Sbjct:    1 MRCVHCHTTETPLWRAGPAGPKTLCNACGVRWKK 34          
BLAST of Gcaud9863.t1 vs. uniprot
Match: A0A835RK71_VANPL (GATA-type domain-containing protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RK71_VANPL)

HSP 1 Score: 74.7 bits (182), Expect = 1.220e-11
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 0
Query:   10 RLQCVHCHSTETPLWRAGPDGPKTLCNACGVRYKKGKLL 48
            R +C HC S ETP WRAGPDGPKTLCNACGVRYK G+L+
Sbjct:  153 RRKCRHCESEETPQWRAGPDGPKTLCNACGVRYKSGRLV 191          
BLAST of Gcaud9863.t1 vs. uniprot
Match: A0A6A6NIN6_HEVBR (GATA-type domain-containing protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6NIN6_HEVBR)

HSP 1 Score: 72.0 bits (175), Expect = 1.270e-11
Identity = 28/54 (51.85%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    9 LRLQCVHCHSTETPLWRAGPDGPKTLCNACGVRYKKGKLLLYKDDNGNLTAVQR 62
            L+  C+ CH+T TP WR+GP+GPKTLCNACG+RY+K +  L   D G     +R
Sbjct:   27 LKKSCIDCHTTRTPCWRSGPEGPKTLCNACGIRYRKKRWALLGLDKGRAEKCRR 80          
BLAST of Gcaud9863.t1 vs. uniprot
Match: A0A1X6P494_PORUM (GATA-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P494_PORUM)

HSP 1 Score: 77.4 bits (189), Expect = 1.680e-11
Identity = 30/39 (76.92%), Postives = 36/39 (92.31%), Query Frame = 0
Query:   12 QCVHCHSTETPLWRAGPDGPKTLCNACGVRYKKGKLLLY 50
            +CVHC +T TPLWR+GPDGPKTLCNACGVR+KKG+L L+
Sbjct:    6 KCVHCSATATPLWRSGPDGPKTLCNACGVRHKKGRLALF 44          
BLAST of Gcaud9863.t1 vs. uniprot
Match: UPI0011D2101D (protein DEFECTIVE IN MERISTEM SILENCING 3-like n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D2101D)

HSP 1 Score: 77.0 bits (188), Expect = 2.020e-11
Identity = 41/86 (47.67%), Postives = 52/86 (60.47%), Query Frame = 0
Query:   10 RLQCVHCHSTETPLWRAGPDGPKTLCNACGVRYKKGKLLL-YKDDNGNLTAVQRHDAVPFHVPPT---SKKTSRKLPSPASQPASP 91
            R QC HC S +TP WRAGP GPKTLCNACGVRYK G+LLL Y+        + +H     H  P    S+  +++L  P + PA+P
Sbjct:  609 RQQCAHCASEKTPQWRAGPLGPKTLCNACGVRYKSGQLLLEYRPAASPTVLLTQHSN--SHSKPALSGSRLRNKRLRLPGTSPAAP 692          
The following BLAST results are available for this feature:
BLAST of Gcaud9863.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J663_9FLOR2.550e-12873.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QN20_CHOCR1.020e-11550.24GATA-type domain-containing protein n=1 Tax=Chondr... [more]
A0A6T6AV47_9RHOD1.420e-1269.39Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A843TML9_COLES7.180e-1244.66GATA-type domain-containing protein n=1 Tax=Coloca... [more]
A0A1D1Y699_9ARAE7.350e-1246.99GATA transcription factor 12 (Fragment) n=1 Tax=An... [more]
A0A2V3IMZ4_9FLOR1.040e-1185.29GATA transcription factor 9 n=1 Tax=Gracilariopsis... [more]
A0A835RK71_VANPL1.220e-1176.92GATA-type domain-containing protein n=2 Tax=Vanill... [more]
A0A6A6NIN6_HEVBR1.270e-1151.85GATA-type domain-containing protein n=1 Tax=Hevea ... [more]
A0A1X6P494_PORUM1.680e-1176.92GATA-type domain-containing protein n=1 Tax=Porphy... [more]
UPI0011D2101D2.020e-1147.67protein DEFECTIVE IN MERISTEM SILENCING 3-like n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 7..67
e-value: 5.0E-18
score: 75.9
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 13..46
e-value: 8.4E-18
score: 63.7
IPR000679Zinc finger, GATA-typePROSITEPS00344GATA_ZN_FINGER_1coord: 13..38
IPR000679Zinc finger, GATA-typePROSITEPS50114GATA_ZN_FINGER_2coord: 7..43
score: 13.1779
IPR000679Zinc finger, GATA-typeCDDcd00202ZnF_GATAcoord: 12..44
e-value: 1.78199E-14
score: 65.4718
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 10..92
e-value: 3.1E-16
score: 61.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..93
NoneNo IPR availablePANTHERPTHR45658:SF37GATA ZINC FINGER FAMILY PROTEIN, EXPRESSEDcoord: 12..48
NoneNo IPR availablePANTHERPTHR45658GATA TRANSCRIPTION FACTORcoord: 12..48
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 6..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_584_length_21412_cov_4.339853contigNODE_584_length_21412_cov_4.339853:2456..3784 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9863.t1Gcaud9863.t1Gracilaria caudata M_176_S67 malemRNANODE_584_length_21412_cov_4.339853 2456..3784 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9863.t1 ID=Gcaud9863.t1|Name=Gcaud9863.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=417bp
MGKIADPSLRLQCVHCHSTETPLWRAGPDGPKTLCNACGVRYKKGKLLLY
KDDNGNLTAVQRHDAVPFHVPPTSKKTSRKLPSPASQPASPDLSAKRSAI
RKVPSEGAIAPPFGKKPRSRSRRANAGQLPGRYATKTLPDTMSQHCRSPT
TSPRNSPKTASSTTPSHTENRIPPLNFQRLYTVNEPPLSKFIDPEDESMF
PDMASLGLDCSPRANNTVVLPMPVDASCVEQFSFAFTGCGNSLRIDAPDR
REALRGLLLDRTRKLSRTYEATVGALVRLCEQRYHNAKVKNIDGKLSSVD
DCRNFVRAFAHEQSCGFGLEDDGLSSVDEVAQMMSRSNSVAMMLPERTAH
CNAVNCFKALMDSSELEGFAEACMVELLAEDVMAVLAQQGHSEFDKDAGC
RIPEAAIRPKAIPTPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000679Znf_GATA
IPR013088Znf_NHR/GATA