Gcaud9849.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9849.t1
Unique NameGcaud9849.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length234
Homology
BLAST of Gcaud9849.t1 vs. uniprot
Match: A0A2V3IH66_9FLOR (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH66_9FLOR)

HSP 1 Score: 375 bits (964), Expect = 1.270e-128
Identity = 187/234 (79.91%), Postives = 210/234 (89.74%), Query Frame = 0
Query:    1 MVTTQP-AKQDVPSNAPAACPGTTSASAGKSNACVGXXXQTACASGTAATQAEQDAVSIARRLKHAIRHKILVLSGKGGVGKSTISAQLALCLAAQGLQVGLLDVDVCGPSIPHMLGVAGEEIRMSASGWSPVYVEENLALMSIGFMLANRDDAVIWRGPRKTGLIKQFLRDVDWGELDYLIIDSPPGTSDEHISLVQMMKQCDVDGAVIVTTPQEVSLLDVRKEINFCRKSET 233
            MV+T P  ++DVP NAP++CPGTTS+SAG ++ACVG   QTACASGT  TQAEQDA  IA R++H++RHKILVLSGKGGVGKST+SAQLALCLAA G QVGLLDVDVCGPSIPHMLGV  EE+RMS SGWSPVYVEENLA+MSIGFML +RD+A+IWRG RKTGLIKQFLRDV WGELDYL+IDSPPGTSDEHISLVQM+ Q  +DGA+IVTTPQEVSLLDVRKEINFCRKS+T
Sbjct:    1 MVSTDPPTREDVPENAPSSCPGTTSSSAGNTSACVGCPNQTACASGTPNTQAEQDAAMIASRIRHSVRHKILVLSGKGGVGKSTVSAQLALCLAAMGKQVGLLDVDVCGPSIPHMLGVPAEEVRMSNSGWSPVYVEENLAVMSIGFMLPSRDNAIIWRGARKTGLIKQFLRDVHWGELDYLVIDSPPGTSDEHISLVQMLNQSHIDGAIIVTTPQEVSLLDVRKEINFCRKSDT 234          
BLAST of Gcaud9849.t1 vs. uniprot
Match: R7Q2Z8_CHOCR (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2Z8_CHOCR)

HSP 1 Score: 303 bits (776), Expect = 6.380e-100
Identity = 158/226 (69.91%), Postives = 187/226 (82.74%), Query Frame = 0
Query:   10 DVPSNAPAACPGTTSASAGKSNACVGXXXQTACASGTAATQA-EQDAVSIARRLKHAIRHKILVLSGKGGVGKSTISAQLALCLAAQ-GLQVGLLDVDVCGPSIPHMLGVAGEEIRMSASGWSPVYVEENLALMSIGFMLANRDDAVIWRGPRKTGLIKQFLRDVDWGELDYLIIDSPPGTSDEHISLVQMMKQCDVDGAVIVTTPQEVSLLDVRKEINFCRKSET 233
            +VP +A   CPG  + +AGK+++C  XXX        AA +  + D ++IARRLK A++HKILVLSGKGGVGKST++AQL+L L+A   L VGLLDVDVCGPS P MLGV+ EE+RMS SGWSPVYVEENL +MSIGFML  +DDA+IWRG RKTGLIKQFLRDVDWGELDYLI+D+PPGTSDEHISLVQM+ + +VDGA+IVTTPQEVSL+DVRKEINFCRKS T
Sbjct:   14 EVPEDAATGCPGVEADTAGKADSCXXXXXXXXXXXXEAANKGPDPDVLAIARRLKTAVKHKILVLSGKGGVGKSTVAAQLSLALSANHSLDVGLLDVDVCGPSAPQMLGVSDEEVRMSNSGWSPVYVEENLGVMSIGFMLPTKDDAIIWRGVRKTGLIKQFLRDVDWGELDYLIVDAPPGTSDEHISLVQMLAESNVDGALIVTTPQEVSLIDVRKEINFCRKSGT 239          
BLAST of Gcaud9849.t1 vs. uniprot
Match: A0A2P6VKI3_9CHLO (Cytosolic Fe-S cluster assembly factor NBP35 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VKI3_9CHLO)

HSP 1 Score: 302 bits (774), Expect = 2.140e-99
Identity = 155/222 (69.82%), Postives = 177/222 (79.73%), Query Frame = 0
Query:   10 DVPSNAPAACPGTTSASAGKSNACVGXXXQTACASGTAATQAEQDAVSIARRLKHAIRHKILVLSGKGGVGKSTISAQLALCLAAQGLQVGLLDVDVCGPSIPHMLGVAGEEIRMSASGWSPVYVEENLALMSIGFMLANRDDAVIWRGPRKTGLIKQFLRDVDWGELDYLIIDSPPGTSDEHISLVQMMKQCDVDGAVIVTTPQEVSLLDVRKEINFCRKS 231
            DVP  AP  CPGT +  AGK+ AC G   Q ACAS  A    + D  +IA RL   I+H ILVLSGKGGVGKST SAQLA  LAA+GL+VGLLD+D+CGPS+P MLG+ GEEI  S +GWSPVYV+ENL +MSIGFML N DDAVIWRGPRK GLIKQFL+DV WGE DYLIIDSPPGTSDEHIS+VQ +K   VDGAV+VTTPQEVS++DVRKEINFC+K+
Sbjct:    3 DVPEGAPEHCPGTDAEQAGKAAACEGCPNQAACAS--APKGPDPDLAAIAARLA-PIKHIILVLSGKGGVGKSTFSAQLAWALAARGLEVGLLDIDICGPSLPKMLGLEGEEIHQSGAGWSPVYVQENLGVMSIGFMLPNPDDAVIWRGPRKNGLIKQFLKDVHWGECDYLIIDSPPGTSDEHISIVQFLKAARVDGAVVVTTPQEVSIIDVRKEINFCKKT 221          
BLAST of Gcaud9849.t1 vs. uniprot
Match: A0A2P6TVH6_CHLSO (Cytosolic Fe-S cluster assembly factor NBP35 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TVH6_CHLSO)

HSP 1 Score: 302 bits (773), Expect = 2.670e-99
Identity = 152/222 (68.47%), Postives = 178/222 (80.18%), Query Frame = 0
Query:   10 DVPSNAPAACPGTTSASAGKSNACVGXXXQTACASGTAATQAEQDAVSIARRLKHAIRHKILVLSGKGGVGKSTISAQLALCLAAQGLQVGLLDVDVCGPSIPHMLGVAGEEIRMSASGWSPVYVEENLALMSIGFMLANRDDAVIWRGPRKTGLIKQFLRDVDWGELDYLIIDSPPGTSDEHISLVQMMKQCDVDGAVIVTTPQEVSLLDVRKEINFCRKS 231
            D P++AP  CPGT S  AGK+ AC G   Q ACAS  A    + D V+IA RL   ++H +LVLSGKGGVGKST SAQLA  LAA+GL+VGLLD+D+CGPS+P MLG+ GEEI  S +GWSPVYV+ENL +MSIGFML N DDAVIWRGPRK GLIKQFL+DV WG  DYL+IDSPPGTSDEHIS+VQ +K   VDGAV+VTTPQEVS++DVRKEINFC+K+
Sbjct:    5 DRPADAPEHCPGTQSEEAGKAAACAGCPNQAACAS--APKGPDPDLVAIAERLA-PVKHIVLVLSGKGGVGKSTFSAQLAFALAARGLEVGLLDIDICGPSVPKMLGLEGEEIHQSGAGWSPVYVQENLGVMSIGFMLPNPDDAVIWRGPRKNGLIKQFLKDVHWGACDYLVIDSPPGTSDEHISIVQFLKAARVDGAVVVTTPQEVSIIDVRKEINFCKKT 223          
BLAST of Gcaud9849.t1 vs. uniprot
Match: A0A7S0RW38_9CHLO (Cytosolic Fe-S cluster assembly factor NBP35 n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RW38_9CHLO)

HSP 1 Score: 301 bits (771), Expect = 7.840e-99
Identity = 156/232 (67.24%), Postives = 184/232 (79.31%), Query Frame = 0
Query:    1 MVTTQPAKQD-VPSNAPAACPGTTSASAGKSNACVGXXXQTACASGTAATQAEQDAVSIARRLKHAIRHKILVLSGKGGVGKSTISAQLALCLAAQGLQVGLLDVDVCGPSIPHMLGVAGEEIRMSASGWSPVYVEENLALMSIGFMLANRDDAVIWRGPRKTGLIKQFLRDVDWGELDYLIIDSPPGTSDEHISLVQMMKQ-CDVDGAVIVTTPQEVSLLDVRKEINFCRK 230
            M  +Q AK+D VP NAP  CPGT+S  AGKS AC G   Q ACA  TA    + D V+I  R+  A++HKILVLSGKGGVGKST SAQLA  LAAQG +VGLLD+D+CGPS+P MLG+ G+E+  SA GWSPVYVE+NLA+MSIGFML N D+AVIWRGPRK GLIKQFL+DV WGELDYL++D+PPGTSDEHI++ Q +      DGAVIVTTPQEV+++DVRKEINFCRK
Sbjct:    1 MSASQEAKRDDVPENAPQHCPGTSSDQAGKSAACAGCPNQAACA--TAPKGPDPDLVAIGARMA-AVKHKILVLSGKGGVGKSTFSAQLAFALAAQGKEVGLLDIDICGPSVPKMLGLEGQEVHQSAVGWSPVYVEDNLAVMSIGFMLPNPDEAVIWRGPRKNGLIKQFLKDVHWGELDYLVVDAPPGTSDEHITIAQCLGAGTQADGAVIVTTPQEVAIIDVRKEINFCRK 229          
BLAST of Gcaud9849.t1 vs. uniprot
Match: A4RRN3_OSTLU (Cytosolic Fe-S cluster assembly factor NBP35 n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4RRN3_OSTLU)

HSP 1 Score: 299 bits (766), Expect = 1.960e-98
Identity = 151/225 (67.11%), Postives = 178/225 (79.11%), Query Frame = 0
Query:   10 DVPSNAPAACPGTTSASAGKSNACVGXXXQTACASGTAATQAE---QDAVSIARRLKHAIRHKILVLSGKGGVGKSTISAQLALCLAAQGLQVGLLDVDVCGPSIPHMLGVAGEEIRMSASGWSPVYVEENLALMSIGFMLANRDDAVIWRGPRKTGLIKQFLRDVDWGELDYLIIDSPPGTSDEHISLVQMMKQCDVDGAVIVTTPQEVSLLDVRKEINFCRKS 231
            D P NAP ACPGT SA AG+  +C G   + ACASG AA   E    DA  +A RL+  +R KILVLSGKGGVGKST +AQLA  LA +G +VGLLDVD+CGPS+P M G A  E+  S SGWSPVYVEENLA+MSIGFML NRDDAVIWRGPRK GLIKQFL D +WGELDYLI+D+PPGTSDEH+S+VQ +K+  VDGA++VTTPQEV++ DVRKE+NFC+K+
Sbjct:    4 DRPENAPEACPGTASARAGREASCAGCPNRAACASGEAAKAREGTDADATRVAERLR-GVRRKILVLSGKGGVGKSTFAAQLAFGLAGRGKEVGLLDVDICGPSVPTMCGDAEAEVHKSNSGWSPVYVEENLAVMSIGFMLPNRDDAVIWRGPRKNGLIKQFLADTEWGELDYLIVDAPPGTSDEHLSVVQYLKEAGVDGALVVTTPQEVAVADVRKELNFCKKT 227          
BLAST of Gcaud9849.t1 vs. uniprot
Match: A0A835ZEQ2_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEQ2_9STRA)

HSP 1 Score: 298 bits (762), Expect = 8.440e-98
Identity = 149/221 (67.42%), Postives = 177/221 (80.09%), Query Frame = 0
Query:   11 VPSNAPAACPGTTSASAGKSNACVGXXXQTACASGTAATQAEQDAVSIARRLKHAIRHKILVLSGKGGVGKSTISAQLALCLAAQGLQVGLLDVDVCGPSIPHMLGVAGEEIRMSASGWSPVYVEENLALMSIGFMLANRDDAVIWRGPRKTGLIKQFLRDVDWGELDYLIIDSPPGTSDEHISLVQMMKQCDVDGAVIVTTPQEVSLLDVRKEINFCRKS 231
            VP+NA A C G  S +AGK++AC G   Q ACASG AA Q +     +A RL   ++H +LVLSGKGGVGKST++ QLA  LA+QG QVGLLDVD+CGPS+P MLG+ G+E+  SA+GWSPVYVE+NL +MSIGFML   DDAVIWRGPRK GLIKQFL DVDWG LDYL+ID+PPGTSDEHIS +Q +K C+VDGAVIV+T QEVSL DVRKEINFC+K+
Sbjct:    4 VPANANAGCVGPQSDAAGKASACAGCPNQAACASG-AAKQTDPSVAQVAARLAD-VKHTVLVLSGKGGVGKSTMACQLAFALASQGHQVGLLDVDICGPSVPRMLGLTGQEVHQSAAGWSPVYVEDNLGVMSIGFMLPGSDDAVIWRGPRKNGLIKQFLTDVDWGTLDYLVIDTPPGTSDEHISTIQYLKGCNVDGAVIVSTNQEVSLADVRKEINFCKKT 222          
BLAST of Gcaud9849.t1 vs. uniprot
Match: A0A3B6NRK1_WHEAT (Uncharacterized protein n=7 Tax=Poaceae TaxID=4479 RepID=A0A3B6NRK1_WHEAT)

HSP 1 Score: 293 bits (751), Expect = 9.400e-98
Identity = 147/223 (65.92%), Postives = 176/223 (78.92%), Query Frame = 0
Query:    8 KQDVPSNAPAACPGTTSASAGKSNACVGXXXQTACASGTAATQAEQDAVSIARRLKHAIRHKILVLSGKGGVGKSTISAQLALCLAAQGLQVGLLDVDVCGPSIPHMLGVAGEEIRMSASGWSPVYVEENLALMSIGFMLANRDDAVIWRGPRKTGLIKQFLRDVDWGELDYLIIDSPPGTSDEHISLVQMMKQCDVDGAVIVTTPQEVSLLDVRKEINFCRK 230
            K DVP +A A CPGT S  AGK+++C G   Q  CA  TA    + D V+IA R+   ++HKILVLSGKGGVGKST SAQL+  LA    QVGLLD+D+CGPSIP MLGV G++I  S  GWSP+YVE NL +MSIGFML N DDAVIWRGPRK  LIKQFL+DVDWGE+DYL++D+PPGTSDEHIS+VQ ++  +VDGA+IVTTPQ+VSL+DVRKEINFC+K
Sbjct:    7 KGDVPEDANAHCPGTQSDEAGKADSCAGCPNQQICA--TAPKGPDPDLVAIAERMA-TVKHKILVLSGKGGVGKSTFSAQLSFALAEMDHQVGLLDIDICGPSIPKMLGVEGQDIHQSNLGWSPIYVESNLGVMSIGFMLPNPDDAVIWRGPRKNRLIKQFLKDVDWGEIDYLVVDAPPGTSDEHISIVQYLQATEVDGAIIVTTPQQVSLIDVRKEINFCKK 226          
BLAST of Gcaud9849.t1 vs. uniprot
Match: A0A484E0K0_BRELC (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0K0_BRELC)

HSP 1 Score: 296 bits (758), Expect = 2.640e-97
Identity = 148/222 (66.67%), Postives = 178/222 (80.18%), Query Frame = 0
Query:   11 VPSNAPAACPGTTSASAGKSNACVGXXXQTACASGTAATQAEQDAVSIARRLKHAIRHKILVLSGKGGVGKSTISAQLALCLAAQGLQVGLLDVDVCGPSIPHMLGVAGEEIRMSASGWSPVYVEENLALMSIGFMLANRDDAVIWRGPRKTGLIKQFLRDVDWGELDYLIIDSPPGTSDEHISLVQMMKQCDVDGAVIVTTPQEVSLLDVRKEINFCRKSE 232
            +PSNA   C G  S  AGK++ C G   Q+ CASG AA Q +  A  + +RL   I+HKILVLSGKGGVGKSTI+ QLA  LA QG QVGLLDVD+ GPS+P MLG+ G+E+  SA+GWSPVYV++NL +MSIGFML N DDA+IWRGP+K+G+IKQFL DV WGELDYLIID+PPGTSDEHIS+VQ MK+ D+DGAV+VTTPQEV+L DVRKE+NFC K+E
Sbjct:    5 IPSNANEECVGPQSEQAGKADGCAGCPNQSVCASG-AARQPDTAASDVKQRLA-GIKHKILVLSGKGGVGKSTIACQLAFALAGQGFQVGLLDVDITGPSVPRMLGLLGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNADDAIIWRGPKKSGIIKQFLVDVQWGELDYLIIDTPPGTSDEHISIVQYMKEADLDGAVVVTTPQEVALSDVRKELNFCLKTE 224          
BLAST of Gcaud9849.t1 vs. uniprot
Match: A0A1D6CA07_WHEAT (Cytosolic Fe-S cluster assembly factor NBP35 n=6 Tax=Triticeae TaxID=147389 RepID=A0A1D6CA07_WHEAT)

HSP 1 Score: 296 bits (757), Expect = 4.390e-97
Identity = 147/223 (65.92%), Postives = 177/223 (79.37%), Query Frame = 0
Query:    8 KQDVPSNAPAACPGTTSASAGKSNACVGXXXQTACASGTAATQAEQDAVSIARRLKHAIRHKILVLSGKGGVGKSTISAQLALCLAAQGLQVGLLDVDVCGPSIPHMLGVAGEEIRMSASGWSPVYVEENLALMSIGFMLANRDDAVIWRGPRKTGLIKQFLRDVDWGELDYLIIDSPPGTSDEHISLVQMMKQCDVDGAVIVTTPQEVSLLDVRKEINFCRK 230
            K DVP +A A CPGT S  AGK+++C G   Q  CA  TA    + D V+IA R+   ++HKILVLSGKGGVGKST SAQL+  LA    QVGLLD+D+CGPSIP MLG+ G++I  S  GWSP+YVE NL +MSIGFML N DDAVIWRGPRK GLIKQFL+DVDWGE+DYL++D+PPGTSDEHIS+VQ ++  +VDGA+IVTTPQ+VSL+DVRKEINFC+K
Sbjct:    7 KGDVPEDANAHCPGTQSEEAGKADSCAGCPNQQICA--TAPKGPDPDLVAIAERMA-TVKHKILVLSGKGGVGKSTFSAQLSFALAEMDHQVGLLDIDICGPSIPKMLGLEGQDIHQSNLGWSPIYVESNLGVMSIGFMLPNPDDAVIWRGPRKNGLIKQFLKDVDWGEIDYLVVDAPPGTSDEHISIVQYLQATEVDGAIIVTTPQQVSLIDVRKEINFCKK 226          
The following BLAST results are available for this feature:
BLAST of Gcaud9849.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IH66_9FLOR1.270e-12879.91Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
R7Q2Z8_CHOCR6.380e-10069.91Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A2P6VKI3_9CHLO2.140e-9969.82Cytosolic Fe-S cluster assembly factor NBP35 n=1 T... [more]
A0A2P6TVH6_CHLSO2.670e-9968.47Cytosolic Fe-S cluster assembly factor NBP35 n=1 T... [more]
A0A7S0RW38_9CHLO7.840e-9967.24Cytosolic Fe-S cluster assembly factor NBP35 n=1 T... [more]
A4RRN3_OSTLU1.960e-9867.11Cytosolic Fe-S cluster assembly factor NBP35 n=2 T... [more]
A0A835ZEQ2_9STRA8.440e-9867.42Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A3B6NRK1_WHEAT9.400e-9865.92Uncharacterized protein n=7 Tax=Poaceae TaxID=4479... [more]
A0A484E0K0_BRELC2.640e-9766.67Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A1D6CA07_WHEAT4.390e-9765.92Cytosolic Fe-S cluster assembly factor NBP35 n=6 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033756Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35PFAMPF10609ParAcoord: 66..232
e-value: 4.4E-74
score: 249.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 64..234
e-value: 3.9E-68
score: 231.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 63..231
NoneNo IPR availablePANTHERPTHR23264:SF35CYTOSOLIC FE-S CLUSTER ASSEMBLY FACTOR NUBP1coord: 8..232
NoneNo IPR availableCDDcd02037Mrp_NBP35coord: 68..230
e-value: 2.29494E-101
score: 291.327
IPR019591Mrp/NBP35 ATP-binding proteinPANTHERPTHR23264NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATEDcoord: 8..232
IPR000808Mrp, conserved sitePROSITEPS01215MRPcoord: 174..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1575_length_9670_cov_3.711243contigNODE_1575_length_9670_cov_3.711243:2..701 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9849.t1Gcaud9849.t1Gracilaria caudata M_176_S67 malemRNANODE_1575_length_9670_cov_3.711243 2..701 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9849.t1 ID=Gcaud9849.t1|Name=Gcaud9849.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=234bp
MVTTQPAKQDVPSNAPAACPGTTSASAGKSNACVGCPNQTACASGTAATQ
AEQDAVSIARRLKHAIRHKILVLSGKGGVGKSTISAQLALCLAAQGLQVG
LLDVDVCGPSIPHMLGVAGEEIRMSASGWSPVYVEENLALMSIGFMLANR
DDAVIWRGPRKTGLIKQFLRDVDWGELDYLIIDSPPGTSDEHISLVQMMK
QCDVDGAVIVTTPQEVSLLDVRKEINFCRKSETX
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033756YlxH/NBP35
IPR027417P-loop_NTPase
IPR019591Mrp/NBP35_ATP-bd
IPR000808Mrp_CS