Gcaud9838.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9838.t1
Unique NameGcaud9838.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length116
Homology
BLAST of Gcaud9838.t1 vs. uniprot
Match: A0A2V3J0E6_9FLOR (Cytochrome b-c1 complex subunit 7-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0E6_9FLOR)

HSP 1 Score: 202 bits (514), Expect = 1.690e-65
Identity = 99/115 (86.09%), Postives = 110/115 (95.65%), Query Frame = 0
Query:    1 MSVAKYMLKIPGVHALVSRAARAYQAAVGAELRKYGLRYDDLLNEYDDEVKHAISKLPPHELELRNKRLKRAIDLDVKKTYLPEHIQEQEDVWNPYLRTRIEALKQKKVERQVIE 115
            MSVAKY+LK+PGVH+L+SRAAR+YQAAVGAELR+YGLRYDDLLNEYDDEVKHAISKL P ELELRNKRLKRAIDLDVKKTYLPE IQ QED+WNPYLRTRI ALKQKK+ERQ+++
Sbjct:    1 MSVAKYLLKLPGVHSLLSRAARSYQAAVGAELRRYGLRYDDLLNEYDDEVKHAISKLSPQELELRNKRLKRAIDLDVKKTYLPEDIQAQEDIWNPYLRTRIAALKQKKLERQIVD 115          
BLAST of Gcaud9838.t1 vs. uniprot
Match: A0A1X6NXZ7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXZ7_PORUM)

HSP 1 Score: 147 bits (371), Expect = 1.190e-43
Identity = 73/110 (66.36%), Postives = 89/110 (80.91%), Query Frame = 0
Query:    3 VAKYMLKIPGVHALVSRAARAYQAAVGAELRKYGLRYDDLLNEYDDEVKHAISKLPPHELELRNKRLKRAIDLDVKKTYLPEHIQEQEDVWNPYLRTRIEALKQKKVERQ 112
            VA  +LKIPG+ AL  RAA +YQAAVG ELRKYGLRYDDLLNEYD EV+  I  +PP E ELR KRL RAID+D+KKT LP+ IQ ++D+WNPY+R+R+ ALKQ ++ERQ
Sbjct:    8 VASVLLKIPGMTALARRAAASYQAAVGNELRKYGLRYDDLLNEYDPEVRKTIRTMPPEEAELRAKRLTRAIDVDLKKTQLPDPIQAKQDIWNPYIRSRLGALKQSQLERQ 117          
BLAST of Gcaud9838.t1 vs. uniprot
Match: A0A7S1T6U0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T6U0_9RHOD)

HSP 1 Score: 130 bits (328), Expect = 3.690e-37
Identity = 66/115 (57.39%), Postives = 88/115 (76.52%), Query Frame = 0
Query:    1 MSVAKYMLKIPGVHALVSRAARAYQAAVGAELRKYGLRYDDLLNEYDDEVKHAISKLPPHELELRNKRLKRAIDLDVKKTYLPEHIQEQEDVWNPYLRTRIEALKQKKVERQVIE 115
            M +  ++L++P V  +VS  +++YQAAV +ELRK+GLRYDDLLNE D EVK AI  LP  E ELR KRLKRA+DLD+KKTYL   + ++ DVWNPY+R RIE +K+++V+RQ  E
Sbjct:    1 MGMGDFLLRLPVVRPMVSWMSKSYQAAVESELRKFGLRYDDLLNEDDPEVKRAIENLPAEEQELRWKRLKRAMDLDLKKTYLHPDMAKEVDVWNPYIRDRIEVMKRERVDRQRYE 115          
BLAST of Gcaud9838.t1 vs. uniprot
Match: A0A5J4YYP2_PORPP (Cytochrome b-c1 complex subunit 7-2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYP2_PORPP)

HSP 1 Score: 124 bits (310), Expect = 2.080e-34
Identity = 60/115 (52.17%), Postives = 81/115 (70.43%), Query Frame = 0
Query:    1 MSVAKYMLKIPGVHALVSRAARAYQAAVGAELRKYGLRYDDLLNEYDDEVKHAISKLPPHELELRNKRLKRAIDLDVKKTYLPEHIQEQEDVWNPYLRTRIEALKQKKVERQVIE 115
            M + K ++ IPGV  L+    R  +  +   LR+YGLRYDDLLNEYD EVK AI +LP  E ELR KR+KRA D+D+KKTYL   I  +ED+WNPY+R+R+  LK+++ E+Q+ E
Sbjct:    1 MGLGKALMLIPGVRQLLRAMQRFERNGLETNLRRYGLRYDDLLNEYDPEVKKAIEQLPAWEQELRIKRIKRAFDIDIKKTYLAPEIAAKEDIWNPYIRSRVSVLKRERFEKQITE 115          
BLAST of Gcaud9838.t1 vs. uniprot
Match: M1US14_CYAM1 (Cytochrome c reductase subunit 7(VI) n=2 Tax=cellular organisms TaxID=131567 RepID=M1US14_CYAM1)

HSP 1 Score: 123 bits (308), Expect = 4.310e-34
Identity = 63/107 (58.88%), Postives = 78/107 (72.90%), Query Frame = 0
Query:    4 AKYMLKIPGVHALVSRAARAYQAAVGAELRKYGLRYDDLLNEYDDEVKHAISKLPPHELELRNKRLKRAIDLDVKKTYLPEHIQEQEDVWNPYLRTRIEALKQKKVE 110
            A  +L +PG   LV+  AR Y+  V  ELRK+GLRYDDLL E D EV  A+ +LPP E ELR KR+KRA+DL +KKTYL E+I +QEDVWNPYLR R+  +KQK+ E
Sbjct:    5 ADLVLSVPGTRPLVTALARWYRREVEQELRKFGLRYDDLLLETDPEVSAALEQLPPAEQELRWKRIKRALDLSMKKTYLAENIAQQEDVWNPYLRERVSLIKQKRQE 111          
BLAST of Gcaud9838.t1 vs. uniprot
Match: A0A7J7IHI5_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHI5_9RHOD)

HSP 1 Score: 121 bits (304), Expect = 1.750e-33
Identity = 64/107 (59.81%), Postives = 78/107 (72.90%), Query Frame = 0
Query:    4 AKYMLKIPGVHALVSRAARAYQAAVGAELRKYGLRYDDLLNEYDDEVKHAISKLPPHELELRNKRLKRAIDLDVKKTYLPEHIQEQEDVWNPYLRTRIEALKQKKVE 110
            A+ +L +PG   +V   AR Y+  V  ELRKYGLRYDDL+ E D +V+ A+ +LPP E ELR KRLKRA+DL +KKTYL E I +QEDVWNPYLR RI  LKQK+ E
Sbjct:    5 AELVLSLPGARPVVGALARWYRREVERELRKYGLRYDDLIVEADVDVQTALEQLPPIEQELRWKRLKRALDLSMKKTYLAEDIAQQEDVWNPYLRERIALLKQKRQE 111          
BLAST of Gcaud9838.t1 vs. uniprot
Match: M2XVT8_GALSU (Ubiquinol-cytochrome c reductase subunit 7 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XVT8_GALSU)

HSP 1 Score: 115 bits (289), Expect = 3.230e-31
Identity = 56/105 (53.33%), Postives = 74/105 (70.48%), Query Frame = 0
Query:    4 AKYMLKIPGVHALVSRAARAYQAAVGAELRKYGLRYDDLLNEYDDEVKHAISKLPPHELELRNKRLKRAIDLDVKKTYLPEHIQEQEDVWNPYLRTRIEALKQKK 108
            A +  K+PG+    +  AR +   V  ELRKYGLRYDDLLNE D +VK AI  LP HE +LR KR  RA DL +KKT LPE I ++ED+WNPYLR+RI+ +++++
Sbjct:    5 ADFCQKVPGLRGFYNFLARVHLRGVEKELRKYGLRYDDLLNEQDPDVKQAIEMLPEHEKQLRAKRFIRAFDLSMKKTQLPEEIAQKEDIWNPYLRSRIQLIRRER 109          
BLAST of Gcaud9838.t1 vs. uniprot
Match: A0A388KN81_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KN81_CHABU)

HSP 1 Score: 88.2 bits (217), Expect = 3.420e-20
Identity = 49/94 (52.13%), Postives = 70/94 (74.47%), Query Frame = 0
Query:   20 AARAYQAAVGAELRKYGLRYDDLLNE-YDDEVKHAISKLPPHELELRNKRLKRAIDLDVKKTYLPEHIQEQEDVWNPYLRTRIEALKQKKVERQ 112
            A+R YQAAV AEL+KYGLR+DDL +E YD +V  A+ +LP  E++LRN+RLKRAID  +K TYL + +QE++  +  Y++   + L+Q K+ERQ
Sbjct:   19 ASRRYQAAVAAELKKYGLRWDDLYDEMYDLDVGEALRRLPQSEVDLRNQRLKRAIDHSMKHTYLTKELQEKQTPYAFYVQ---DVLEQVKLERQ 109          
BLAST of Gcaud9838.t1 vs. uniprot
Match: A0A2R6XEC4_MARPO (Cytochrome b-c1 complex subunit 7 n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XEC4_MARPO)

HSP 1 Score: 87.8 bits (216), Expect = 4.470e-20
Identity = 44/92 (47.83%), Postives = 66/92 (71.74%), Query Frame = 0
Query:   20 AARAYQAAVGAELRKYGLRYDDLLNE-YDDEVKHAISKLPPHELELRNKRLKRAIDLDVKKTYLPEHIQEQEDVWNPYLRTRIEALKQKKVE 110
            A+R YQAAV  EL+KYGLRYDDL +E YD ++K A+S+LP  E+  RN R+KRA+D  +K  YLP+ +Q ++  +  YL+  ++ +KQ++ E
Sbjct:   16 ASRRYQAAVAKELKKYGLRYDDLYDEMYDLDIKEAMSRLPESEILARNARIKRAMDASMKHVYLPKELQAKQTPFQYYLQDALDQVKQERKE 107          
BLAST of Gcaud9838.t1 vs. uniprot
Match: D8S3K6_SELML (Uncharacterized protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S3K6_SELML)

HSP 1 Score: 87.0 bits (214), Expect = 8.510e-20
Identity = 42/95 (44.21%), Postives = 72/95 (75.79%), Query Frame = 0
Query:   21 ARAYQAAVGAELRKYGLRYDDLLNEYDD-EVKHAISKLPPHELELRNKRLKRAIDLDVKKTYLPEHIQEQEDVWNPYLRTRIEALKQKKVERQVI 114
            AR Y+A V  ELRK+GLRY+DLL+   D +++ A+S+LP HEL+LRN+RLKRA+DL +K T+L + +Q ++  + PY++ +++ ++ ++ ER+ +
Sbjct:   16 ARRYKANVEKELRKFGLRYEDLLDPMGDPDLEEALSRLPQHELDLRNQRLKRAMDLSMKHTHLSKEMQAKQTPFLPYVQDQLQQVRAERKEREAL 110          
The following BLAST results are available for this feature:
BLAST of Gcaud9838.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0E6_9FLOR1.690e-6586.09Cytochrome b-c1 complex subunit 7-1 n=1 Tax=Gracil... [more]
A0A1X6NXZ7_PORUM1.190e-4366.36Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1T6U0_9RHOD3.690e-3757.39Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YYP2_PORPP2.080e-3452.17Cytochrome b-c1 complex subunit 7-2 n=1 Tax=Porphy... [more]
M1US14_CYAM14.310e-3458.88Cytochrome c reductase subunit 7(VI) n=2 Tax=cellu... [more]
A0A7J7IHI5_9RHOD1.750e-3359.81Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M2XVT8_GALSU3.230e-3153.33Ubiquinol-cytochrome c reductase subunit 7 n=1 Tax... [more]
A0A388KN81_CHABU3.420e-2052.13Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A2R6XEC4_MARPO4.470e-2047.83Cytochrome b-c1 complex subunit 7 n=1 Tax=Marchant... [more]
D8S3K6_SELML8.510e-2044.21Uncharacterized protein n=2 Tax=Selaginella moelle... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003197Cytochrome b-c1 complex subunit 7PFAMPF02271UCR_14kDcoord: 14..112
e-value: 1.4E-24
score: 85.9
IPR003197Cytochrome b-c1 complex subunit 7PANTHERPTHR12022UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEINcoord: 12..112
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyGENE3D1.10.1090.10coord: 1..115
e-value: 8.1E-28
score: 98.7
IPR036544Cytochrome b-c1 complex subunit 7 superfamilySUPERFAMILY8152414 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)coord: 2..111
NoneNo IPR availablePANTHERPTHR12022:SF0CYTOCHROME B-C1 COMPLEX SUBUNIT 7coord: 12..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1288_length_11797_cov_4.425765contigNODE_1288_length_11797_cov_4.425765:9045..9392 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9838.t1Gcaud9838.t1Gracilaria caudata M_176_S67 malemRNANODE_1288_length_11797_cov_4.425765 9045..9392 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9838.t1 ID=Gcaud9838.t1|Name=Gcaud9838.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=116bp
MSVAKYMLKIPGVHALVSRAARAYQAAVGAELRKYGLRYDDLLNEYDDEV
KHAISKLPPHELELRNKRLKRAIDLDVKKTYLPEHIQEQEDVWNPYLRTR
IEALKQKKVERQVIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003197QCR7
IPR036544QCR7_sf