Gcaud9834.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9834.t1
Unique NameGcaud9834.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length415
Homology
BLAST of Gcaud9834.t1 vs. uniprot
Match: A0A2V3J3B7_9FLOR (BRK domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3B7_9FLOR)

HSP 1 Score: 440 bits (1132), Expect = 2.100e-150
Identity = 243/386 (62.95%), Postives = 281/386 (72.80%), Query Frame = 0
Query:   40 MATVLSPEELAKHVTIWNRRERRKIAGNAAPLRRNLSRYLRKHPECEEYVGQDKDPSQPLSDEIDPITGEPISVQNEHVPIWHRVERRKVTGNAAPLRKNLVTYLKKNPNCEVYDGQDKHQNSSSNWHYSTHNPTSSVDAHGLS--RAHPRTSPISINAPNRPAPCAQPLQYQMHLQTHQPVNTATATPLKECDWDPPPLATNPTDNHTSP-------------CQRSQPMQIPQPTHVNDVPYTEMVSSWSNNPEWLTHTTSVHN-HSSAQIFGCCNFMPQSYNSQICGSPMDTS-----HET------HPNAIPIPDVSARER-DLMIPTSFGPETTAMDYAAAYLCVTPKSIDLDHDAFQFSPSNYLLASSLPKASPPFGSPI 397
            M TVLSPEE AKHVTIWNRRERRKIAGNAAPLRRNLSRYL+KHP+CEEYVGQDKDP+   SDEIDP+TGE ISVQNEHVPIWHR+ERRKVTGNAAPLRKNL+TYLKKNPNCEVYDGQDK Q ++SNWHYS+ NP SSVDAH LS  R+H R+SPISINAPNRP+P    L Y +  Q+HQP   +     K  DWD P L   P+ +   P              Q SQPMQIPQPTHVND+PY ++VSSWSNNP+WL H T+VH  +S    +   N M QS+NSQ CGSPMDT+     HE       H N IPIP  +ARER D ++  S+GP++  MD A A+L VTPKS DLD +  QFSPS+YLL S +P+ASPP G  +
Sbjct:    1 MTTVLSPEEQAKHVTIWNRRERRKIAGNAAPLRRNLSRYLQKHPDCEEYVGQDKDPTIKHSDEIDPLTGERISVQNEHVPIWHRIERRKVTGNAAPLRKNLITYLKKNPNCEVYDGQDK-QPATSNWHYSSQNPDSSVDAHSLSLSRSHSRSSPISINAPNRPSP----LPYHVQYQSHQPAKNS-----KIPDWDAPHLTLIPSPSDALPPSSSQYHDADPVSSQASQPMQIPQPTHVNDLPYNDLVSSWSNNPDWLNHATNVHTINSQPHHYAFSNDMGQSFNSQTCGSPMDTTWYANPHEVAIASDDHLNGIPIPVRNARERPDAVMGASYGPDSAQMDSAVAFLSVTPKSKDLDPEN-QFSPSSYLLGS-IPRASPPPGGSV 374          
BLAST of Gcaud9834.t1 vs. uniprot
Match: A0A5J4Z9G2_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z9G2_PORPP)

HSP 1 Score: 158 bits (400), Expect = 3.730e-40
Identity = 81/117 (69.23%), Postives = 89/117 (76.07%), Query Frame = 0
Query:   43 VLSPEELAKHVTIWNRRERRKIAGNAAPLRRNLSRYLRKHPECEEYVGQDKDPSQPLSD-EIDPITGEPISVQNEHVPIWHRVERRKVTGNAAPLRKNLVTYLKKNPNCEVYDGQDK 158
            +L+PEE A+HVTIWNR E RKIAGNAAPLRRNL +YL +HPECEEY GQDK     L    +D  TG+ I   NEHVPIWH VE RKVTGNAAPLRKNL  YLKK+P CE Y GQDK
Sbjct:   27 MLAPEEGARHVTIWNRIECRKIAGNAAPLRRNLGKYLSRHPECEEYAGQDKLLGAHLQPGAVDEKTGQLIVTMNEHVPIWHTVELRKVTGNAAPLRKNLHIYLKKHPQCEEYCGQDK 143          
BLAST of Gcaud9834.t1 vs. uniprot
Match: M2Y3G8_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y3G8_GALSU)

HSP 1 Score: 159 bits (401), Expect = 5.950e-40
Identity = 78/129 (60.47%), Postives = 99/129 (76.74%), Query Frame = 0
Query:   32 SNSAQTLAMAT-VLSPEELAKHVTIWNRRERRKIAGNAAPLRRNLSRYLRKHPECEEYVGQDKDPSQPLS-DEIDPITGEPISVQNEHVPIWHRVERRKVTGNAAPLRKNLVTYLKKNPNCEVYDGQDK 158
            S++++T  MA   ++PEE ++HVTIWNR E RK+AGNAAPLRRNL RYL KHPECE Y GQDK+ S  ++   +DP TG  I   NEHVP+W+++E RK+TGNAAPLRKN+  YL K+P CEVY GQD+
Sbjct:  102 SSNSETADMAMDTMTPEEASQHVTIWNRIECRKVAGNAAPLRRNLERYLAKHPECEVYTGQDKNLSGGIAIGSVDPKTGSTIVAGNEHVPMWNKIEERKITGNAAPLRKNVEAYLAKHPECEVYVGQDR 230          
BLAST of Gcaud9834.t1 vs. uniprot
Match: A0A7S3A7V7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A7V7_9RHOD)

HSP 1 Score: 151 bits (382), Expect = 1.270e-39
Identity = 76/117 (64.96%), Postives = 86/117 (73.50%), Query Frame = 0
Query:   44 LSPEELAKHVTIWNRRERRKIAGNAAPLRRNLSRYLRKHPECEEYVGQDKDPSQPLSDEIDPITGEPISVQNEHVPIWHRVERRKVTGNAAPLRKNLVTYLKKNPNCEVYDGQDKHQ 160
            + PE  A+HVTIWNR E RKIAGNAAPLRRNL +YL KHPECE Y GQ+K   Q             I+ QNEHVPIWH+++RRKVTGNAAPLRKN+  YL K+PNCEVY GQDK Q
Sbjct:    1 MDPEYAAEHVTIWNRIECRKIAGNAAPLRRNLEKYLSKHPECEVYRGQEKILEQ-----------SGITKQNEHVPIWHKLDRRKVTGNAAPLRKNVELYLSKHPNCEVYTGQDKMQ 106          
BLAST of Gcaud9834.t1 vs. uniprot
Match: A0A7S3A8Q6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A8Q6_9RHOD)

HSP 1 Score: 151 bits (382), Expect = 7.000e-39
Identity = 76/117 (64.96%), Postives = 86/117 (73.50%), Query Frame = 0
Query:   44 LSPEELAKHVTIWNRRERRKIAGNAAPLRRNLSRYLRKHPECEEYVGQDKDPSQPLSDEIDPITGEPISVQNEHVPIWHRVERRKVTGNAAPLRKNLVTYLKKNPNCEVYDGQDKHQ 160
            + PE  A+HVTIWNR E RKIAGNAAPLRRNL +YL KHPECE Y GQ+K   Q             I+ QNEHVPIWH+++RRKVTGNAAPLRKN+  YL K+PNCEVY GQDK Q
Sbjct:    1 MDPEYAAEHVTIWNRIECRKIAGNAAPLRRNLEKYLSKHPECEVYRGQEKILEQ-----------SGITKQNEHVPIWHKLDRRKVTGNAAPLRKNVELYLSKHPNCEVYTGQDKMQ 106          
BLAST of Gcaud9834.t1 vs. uniprot
Match: A0A7S0G0Q7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G0Q7_9RHOD)

HSP 1 Score: 151 bits (381), Expect = 9.320e-39
Identity = 75/117 (64.10%), Postives = 86/117 (73.50%), Query Frame = 0
Query:   44 LSPEELAKHVTIWNRRERRKIAGNAAPLRRNLSRYLRKHPECEEYVGQDKDPSQPLSDEIDPITGEPISVQNEHVPIWHRVERRKVTGNAAPLRKNLVTYLKKNPNCEVYDGQDKHQ 160
            + PE  A+HVTIWNR E RKIAGNAAPLRRNL +YL KHPECE Y GQ+K   Q             ++ QNEHVPIWH+++RRKVTGNAAPLRKN+  YL K+PNCEVY GQDK Q
Sbjct:    1 MDPEYAAEHVTIWNRIEFRKIAGNAAPLRRNLDKYLSKHPECEVYRGQEKILEQ-----------SGVTKQNEHVPIWHKLDRRKVTGNAAPLRKNVELYLSKHPNCEVYTGQDKMQ 106          
BLAST of Gcaud9834.t1 vs. uniprot
Match: A0A7S0ZK63_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZK63_9RHOD)

HSP 1 Score: 150 bits (378), Expect = 8.140e-38
Identity = 77/123 (62.60%), Postives = 91/123 (73.98%), Query Frame = 0
Query:   43 VLSPEELAKHVTIWNRRERRKIAGNAAPLRRNLSRYLRKHPECEEYVGQDKD-PSQPLSDEIDPITGEPI------SVQNEHVPIWHRVERRKVTGNAAPLRKNLVTYLKKNPNCEVYDGQDK 158
            +L+PEE AKH+TIWNR E RKIAGNAAPLRRNL+RYL KHPECE + GQDK   +Q +   +   +G  I       V +EHVPIWH +ERRKVTGNAAPLRKNL  YL ++P CE Y+GQDK
Sbjct:   21 MLAPEEAAKHITIWNRLECRKIAGNAAPLRRNLARYLAKHPECEVFTGQDKIIRNQMMQSALLNGSGSQIRTGGVGEVLSEHVPIWHTIERRKVTGNAAPLRKNLEAYLMRHPECEEYNGQDK 143          
BLAST of Gcaud9834.t1 vs. uniprot
Match: A0A1X6PGN5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PGN5_PORUM)

HSP 1 Score: 151 bits (381), Expect = 1.100e-37
Identity = 74/122 (60.66%), Postives = 93/122 (76.23%), Query Frame = 0
Query:   38 LAMATVLSPEELAKHVTIWNRRERRKIAGNAAPLRRNLSRYLRKHPECEEYVGQDKDPSQPLSDEIDPITGEPISV-QNEHVPIWHRVERRKVTGNAAPLRKNLVTYLKKNPNCEVYDGQDK 158
            +++ T L PEE A+HVT+W++ E RKIAGNAAPLRRNL RYL +HPECE Y+ QDK      +  +DP+TGE ++    EHVPIWH ++ RKVTGNAAPL+KNL  YL K+ +CEVYDGQDK
Sbjct:    1 MSIGTGLPPEEGARHVTVWHKVEGRKIAGNAAPLRRNLYRYLERHPECEVYLEQDK--LLDANGGVDPLTGESLTTFHEEHVPIWHTLDGRKVTGNAAPLKKNLAAYLAKHKHCEVYDGQDK 120          
BLAST of Gcaud9834.t1 vs. uniprot
Match: A0A7J7IDF5_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDF5_9RHOD)

HSP 1 Score: 149 bits (375), Expect = 6.960e-36
Identity = 75/115 (65.22%), Postives = 85/115 (73.91%), Query Frame = 0
Query:   44 LSPEELAKHVTIWNRRERRKIAGNAAPLRRNLSRYLRKHPECEEYVGQDKDPSQPLSDEIDPITGEPISVQNEHVPIWHRVERRKVTGNAAPLRKNLVTYLKKNPNCEVYDGQDK 158
            LS EE   HVTIWNR E RKIAGNAAPLRRNL +YL +HPECE + GQD+         +DP     + V NEHVPIWHR+ERRKVTGNAAPLRKNL  YL K+P CEVY+GQD+
Sbjct:  115 LSGEEANTHVTIWNRAELRKIAGNAAPLRRNLRKYLTRHPECEVFDGQDE--------RLDPEVRASM-VDNEHVPIWHRIERRKVTGNAAPLRKNLAKYLTKHPECEVYNGQDR 220          
BLAST of Gcaud9834.t1 vs. uniprot
Match: M1VLQ3_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VLQ3_CYAM1)

HSP 1 Score: 149 bits (376), Expect = 1.140e-35
Identity = 75/115 (65.22%), Postives = 85/115 (73.91%), Query Frame = 0
Query:   44 LSPEELAKHVTIWNRRERRKIAGNAAPLRRNLSRYLRKHPECEEYVGQDKDPSQPLSDEIDPITGEPISVQNEHVPIWHRVERRKVTGNAAPLRKNLVTYLKKNPNCEVYDGQDK 158
            LS EE   HVTIWNR E RKIAGNAAPLRRNL +YL +HPECE + GQD+         +DP     + V NEHVPIWHR+ERRKVTGNAAPLRKNL  YL K+P CEVY+GQD+
Sbjct:  116 LSEEEANMHVTIWNRAELRKIAGNAAPLRRNLRKYLSRHPECEVFDGQDE--------RLDPEVRASM-VDNEHVPIWHRIERRKVTGNAAPLRKNLAKYLAKHPECEVYNGQDR 221          
The following BLAST results are available for this feature:
BLAST of Gcaud9834.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3B7_9FLOR2.100e-15062.95BRK domain-containing protein n=1 Tax=Gracilariops... [more]
A0A5J4Z9G2_PORPP3.730e-4069.23Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
M2Y3G8_GALSU5.950e-4060.47Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S3A7V7_9RHOD1.270e-3964.96Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3A8Q6_9RHOD7.000e-3964.96Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0G0Q7_9RHOD9.320e-3964.10Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0ZK63_9RHOD8.140e-3862.60Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6PGN5_PORUM1.100e-3760.66Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7J7IDF5_9RHOD6.960e-3665.22Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1VLQ3_CYAM11.140e-3565.22Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006576BRK domainPFAMPF07533BRKcoord: 51..84
e-value: 8.8E-6
score: 25.2
coord: 115..152
e-value: 3.3E-5
score: 23.3
IPR037259BRK domain superfamilyGENE3D3.40.5.120coord: 113..155
e-value: 2.6E-10
score: 41.7
IPR037259BRK domain superfamilyGENE3D3.40.5.120coord: 49..94
e-value: 1.8E-8
score: 35.7
IPR037259BRK domain superfamilySUPERFAMILY160481BRK domain-likecoord: 51..91
IPR037259BRK domain superfamilySUPERFAMILY160481BRK domain-likecoord: 114..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1288_length_11797_cov_4.425765contigNODE_1288_length_11797_cov_4.425765:72..1316 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9834.t1Gcaud9834.t1Gracilaria caudata M_176_S67 malemRNANODE_1288_length_11797_cov_4.425765 72..1316 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9834.t1 ID=Gcaud9834.t1|Name=Gcaud9834.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=415bp
LPVPFPTSTLVIPPTPAPDTAAFSPTDTLVTSNSAQTLAMATVLSPEELA
KHVTIWNRRERRKIAGNAAPLRRNLSRYLRKHPECEEYVGQDKDPSQPLS
DEIDPITGEPISVQNEHVPIWHRVERRKVTGNAAPLRKNLVTYLKKNPNC
EVYDGQDKHQNSSSNWHYSTHNPTSSVDAHGLSRAHPRTSPISINAPNRP
APCAQPLQYQMHLQTHQPVNTATATPLKECDWDPPPLATNPTDNHTSPCQ
RSQPMQIPQPTHVNDVPYTEMVSSWSNNPEWLTHTTSVHNHSSAQIFGCC
NFMPQSYNSQICGSPMDTSHETHPNAIPIPDVSARERDLMIPTSFGPETT
AMDYAAAYLCVTPKSIDLDHDAFQFSPSNYLLASSLPKASPPFGSPILPS
CQTINPSVLGARME*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006576BRK_domain
IPR037259BRK_sf