Gcaud9829.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9829.t1
Unique NameGcaud9829.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length116
Homology
BLAST of Gcaud9829.t1 vs. uniprot
Match: A0A2V3IX97_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX97_9FLOR)

HSP 1 Score: 203 bits (516), Expect = 6.510e-65
Identity = 98/115 (85.22%), Postives = 106/115 (92.17%), Query Frame = 0
Query:    1 MLTVDRIAGKSYQLEEDEDAVSTTSAVYLSSDGTLSIGKTDGPAPEKVSATWKYSASDGELLVEIERFYEEGNVKFSVKRVLRGHLDDSRKNLVDLPVFSGGMYQYPADFSQNSE 115
            ML VD+IA KS+QLEEDEDAVSTTSA+YL+ DGTLSIGKTDGP PEKV ATW YS +DGELLVEIER+YEEGN KFSVKRVLRGHLDDSRKNLVDLPVFSGGMY++PADFS NSE
Sbjct:   41 MLAVDKIANKSFQLEEDEDAVSTTSAIYLAEDGTLSIGKTDGPVPEKVDATWNYSDTDGELLVEIERYYEEGNTKFSVKRVLRGHLDDSRKNLVDLPVFSGGMYRHPADFSPNSE 155          
BLAST of Gcaud9829.t1 vs. uniprot
Match: R7Q569_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q569_CHOCR)

HSP 1 Score: 157 bits (396), Expect = 6.560e-46
Identity = 74/114 (64.91%), Postives = 91/114 (79.82%), Query Frame = 0
Query:    2 LTVDRIAGKSYQLEEDEDAVSTTSAVYLSSDGTLSIGKTDGPAPEKVSATWKYSASDGELLVEIERFYEEGNVKFSVKRVLRGHLDDSRKNLVDLPVFSGGMYQYPADFSQNSE 115
            L+   IA KSYQLEEDED+ S TSAVYLS DG+LSIG+TDGP+P+KV A+W YS  DGELL++IER++      FSVKR+L+GHLDD+RKNLV LP+F G MY+ P DFS +SE
Sbjct:   79 LSAAAIANKSYQLEEDEDSCSCTSAVYLSEDGSLSIGRTDGPSPDKVDASWTYSDRDGELLLQIERYFGSDGTPFSVKRILKGHLDDTRKNLVGLPIFEGAMYKEPTDFSPHSE 192          
BLAST of Gcaud9829.t1 vs. uniprot
Match: A0A7S0ZDP4_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZDP4_9RHOD)

HSP 1 Score: 66.6 bits (161), Expect = 3.470e-11
Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 0
Query:   12 YQLEEDEDAVSTTSAVYLSSDGTLSIGKTDGPAPEKVSATWKYSASDGELLVEIERFYE-EGNVKFSVKRVLRG 84
            +QL+E ED   T +AV L+SDGT+++GKTDGP P KV  +WK    D + ++E++R +E E  V+++V+R   G
Sbjct:   83 FQLDEMEDECETCTAVVLNSDGTITLGKTDGPVPIKVEGSWKLFNGD-QFILEVDRVFEGEKGVEYTVQREYAG 155          
BLAST of Gcaud9829.t1 vs. uniprot
Match: A0A7S0ZDN7_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZDN7_9RHOD)

HSP 1 Score: 58.5 bits (140), Expect = 7.890e-9
Identity = 29/65 (44.62%), Postives = 45/65 (69.23%), Query Frame = 0
Query:   21 VSTTSAVYLSSDGTLSIGKTDGPAPEKVSATWKYSASDGELLVEIERFYE-EGNVKFSVKRVLRG 84
            V T +AV L+SDGT+++GKTDGP P KV  +WK    D + ++E++R +E E  V+++V+R   G
Sbjct:    5 VQTCTAVVLNSDGTITLGKTDGPVPIKVEGSWKLFNGD-QFILEVDRVFEGEKGVEYTVQREYAG 68          
BLAST of Gcaud9829.t1 vs. uniprot
Match: A0A7S2H0E8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H0E8_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 8.520e-9
Identity = 27/63 (42.86%), Postives = 40/63 (63.49%), Query Frame = 0
Query:   10 KSYQLEEDEDAVSTTSAVYLSSDGTLSIGKTDGPAPEKVSATWKYSASDGELLVEIERFYEEG 72
            K+YQLEE EDA ++T+ VYL+ D T++ G TDGP  +  S TW+ +    +  ++I R Y  G
Sbjct:   88 KTYQLEEMEDAETSTTKVYLNQDRTITFGDTDGPIADSASGTWEVNPGTNDFTMKIRRRYSTG 150          
BLAST of Gcaud9829.t1 vs. uniprot
Match: A0A6V2Q6H0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2Q6H0_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.000e-8
Identity = 32/88 (36.36%), Postives = 46/88 (52.27%), Query Frame = 0
Query:    6 RIAGKSYQLEEDEDAVSTTSAVYLSSDGTLSIGKTDGPAPEKVSATWKYSASDGELLVEIERFY-------EEGNVKFSVKRVLRGHL 86
            R  GK+YQLEE EDA + T+ V+L++D T++ G TDGP  +  S  W   A   +  + I R Y       + G  +F V R   G +
Sbjct:   52 RCEGKTYQLEELEDAETCTTEVFLNNDRTITFGSTDGPIYDSASGQWSVPAGTNDFSMTIRRRYSTGAKNTDMGEFRFDVVREYTGEM 139          
The following BLAST results are available for this feature:
BLAST of Gcaud9829.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IX97_9FLOR6.510e-6585.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q569_CHOCR6.560e-4664.91Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZDP4_9RHOD3.470e-1144.59Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S0ZDN7_9RHOD7.890e-944.62Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S2H0E8_9STRA8.520e-942.86Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A6V2Q6H0_9STRA2.000e-836.36Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_155_length_42800_cov_4.630125contigNODE_155_length_42800_cov_4.630125:37803..38219 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9829.t1Gcaud9829.t1Gracilaria caudata M_176_S67 malemRNANODE_155_length_42800_cov_4.630125 37803..38219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9829.t1 ID=Gcaud9829.t1|Name=Gcaud9829.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=116bp
MLTVDRIAGKSYQLEEDEDAVSTTSAVYLSSDGTLSIGKTDGPAPEKVSA
TWKYSASDGELLVEIERFYEEGNVKFSVKRVLRGHLDDSRKNLVDLPVFS
GGMYQYPADFSQNSE*
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