Gcaud9821.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9821.t1
Unique NameGcaud9821.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length176
Homology
BLAST of Gcaud9821.t1 vs. uniprot
Match: A0A2V3IXB2_9FLOR (Thioredoxin-like 2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXB2_9FLOR)

HSP 1 Score: 250 bits (638), Expect = 1.470e-82
Identity = 120/169 (71.01%), Postives = 140/169 (82.84%), Query Frame = 0
Query:    1 MLSAFTPSTPLRISPSVQPHTSRCHRRPPQLSVATPPPPLRPSDKSPSHEHASPAQPLVGIESLQRALLTAPPNKLVVVMFHARWCRVCKTLAPKLFRVAEQFPDVLWLSIDFAELPNKPLCAQLGVKLLPTFRFYKPQADLDQAVDHFTTGPFGIKRLVEHLETQNQS 169
            M  AFT  +PLR   S  P +  CHRRPPQLS+A+PPPPLRPSDK    EHASPA+PL+G ++L+ AL  AP +KLVVVMFHARWCRVC+TL+ KLFRVAE FP+V+W S+DFAELPNKPLCA+L VKLLPTFRFYKP+AD+D+A+DHFTTGPFG KRLVEHLE Q  S
Sbjct:    1 MQPAFTNPSPLRNVTSFGPLSPTCHRRPPQLSIASPPPPLRPSDKGLPQEHASPAEPLMGADALRTALNAAPTDKLVVVMFHARWCRVCRTLSSKLFRVAEDFPNVVWFSVDFAELPNKPLCARLNVKLLPTFRFYKPKADIDEALDHFTTGPFGAKRLVEHLEKQRSS 169          
BLAST of Gcaud9821.t1 vs. uniprot
Match: A0A2V3IXE9_9FLOR (Thioredoxin-like 2-1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXE9_9FLOR)

HSP 1 Score: 229 bits (585), Expect = 1.900e-74
Identity = 112/171 (65.50%), Postives = 136/171 (79.53%), Query Frame = 0
Query:    1 MLSAFTPSTPLRISPSVQPHTSRCHRRPPQLSVATPPPPLRPSDKSPS-HEHASPAQPLVGIESLQRALLTAPPNKLVVVMFHARWCRVCKTLAPKLFRVAEQFPDVLWLSIDFAELPNKPLCAQLGVKLLPTFRFYKPQADLDQAVDHFTTGPFGIKRLVEHLETQNQSG 170
            M  AFT  T LRI+   Q     CHRRP + SVATPPPPLRPSDKS S HEHASPA P++G E+LQR L T P +K VVVMFHARWCRVCKTL+ KL+RV ++FP++LWL++DFAE+PNK L +QLGV+LLPTFRFY+P A++D A+DHFT+GPFG KRL+E LE Q  +G
Sbjct:    1 MQPAFTSPTSLRIASVSQTCIQTCHRRPLRASVATPPPPLRPSDKSSSPHEHASPALPVIGAEALQRELNTVPADKFVVVMFHARWCRVCKTLSSKLYRVTQRFPNILWLAVDFAEVPNKQLSSQLGVRLLPTFRFYQPGANIDDALDHFTSGPFGAKRLIERLEDQRSAG 171          
BLAST of Gcaud9821.t1 vs. uniprot
Match: A0A0K9NUL0_ZOSMR (Putative Thioredoxin n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NUL0_ZOSMR)

HSP 1 Score: 78.6 bits (192), Expect = 9.390e-15
Identity = 39/112 (34.82%), Postives = 66/112 (58.93%), Query Frame = 0
Query:   58 LVGIESLQRAL--LTAPPNKLVVVMFHARWCRVCKTLAPKLFRVAEQFPDVLWLSIDFAELPNKPLCAQLGVKLLPTFRFYKPQADLDQAVDHFTTGPFGIKRLVEHLETQN 167
            ++ + S++  L  L    +KLVVV F+  WC  C+ L PKL ++AE+ PD+++  ++F E  NKP+C +L V++LP F FY+     D  +D F+      K++ + + T N
Sbjct:   77 MIDVHSIEEFLQVLNEANDKLVVVEFYGTWCGSCRALFPKLCKIAEEHPDIVFAKVNFDE--NKPMCKRLNVRVLPFFHFYR---GADGQLDSFSCSFAKFKKVKDAIATHN 183          
BLAST of Gcaud9821.t1 vs. uniprot
Match: A0A068TPQ5_COFCA (Thioredoxin domain-containing protein n=5 Tax=Coffea TaxID=13442 RepID=A0A068TPQ5_COFCA)

HSP 1 Score: 78.2 bits (191), Expect = 1.030e-14
Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = 0
Query:   58 LVGIESLQRAL--LTAPPNKLVVVMFHARWCRVCKTLAPKLFRVAEQFPDVLWLSIDFAELPNKPLCAQLGVKLLPTFRFYKPQADLDQAVDHFTTGPFGIKRLVEHLETQN 167
            +V I S Q  +  L+   + LV+V F+  WC  C+ L PKL ++AE+ P+VL+L ++F E  NK LC  L +K+LP F FY+     D+ V+ F+     I++L + + T N
Sbjct:   87 MVDIHSTQEFVDALSQAGDSLVIVDFYGTWCASCRALFPKLCKIAEEHPEVLFLKVNFDE--NKGLCKSLNIKVLPYFHFYR---GADRLVESFSCSLAKIQKLKDAIATHN 193          
BLAST of Gcaud9821.t1 vs. uniprot
Match: A0A022Q005_ERYGU (Thioredoxin domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022Q005_ERYGU)

HSP 1 Score: 78.2 bits (191), Expect = 1.070e-14
Identity = 36/101 (35.64%), Postives = 61/101 (60.40%), Query Frame = 0
Query:   69 LTAPPNKLVVVMFHARWCRVCKTLAPKLFRVAEQFPDVLWLSIDFAELPNKPLCAQLGVKLLPTFRFYKPQADLDQAVDHFTTGPFGIKRLVEHLETQNQS 169
            L+   ++LV+V F   WC  C+ L PK+ R+AEQ P++++L ++F E  NKPLC  L +K+LP F FY+     D  +D F+     +++L + +   N++
Sbjct:   97 LSQAGDRLVIVEFFGAWCASCRALFPKICRIAEQHPEIIFLKVNFDE--NKPLCKSLNIKVLPYFHFYRGS---DGLLDSFSCSLAKLQKLKDAIAAHNKA 192          
BLAST of Gcaud9821.t1 vs. uniprot
Match: A0A2G9HFQ8_9LAMI (Thioredoxin n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HFQ8_9LAMI)

HSP 1 Score: 77.8 bits (190), Expect = 1.590e-14
Identity = 40/113 (35.40%), Postives = 66/113 (58.41%), Query Frame = 0
Query:   58 LVGIESLQRAL--LTAPPNKLVVVMFHARWCRVCKTLAPKLFRVAEQFPDVLWLSIDFAELPNKPLCAQLGVKLLPTFRFYKPQADLDQAVDHFTTGPFGIKRLVEHLETQNQ 168
            ++ I S Q  +  L+   ++LV+V F   WC  C+ L PK+ R+AEQ P++++L ++F E  NK LC  L +K+LP F FY+     D  VD F+     +++L + + T N+
Sbjct:   81 MIDIHSTQEFVDALSQAGDRLVIVEFFGTWCASCRALFPKICRLAEQHPEIIFLKVNFDE--NKTLCKSLNIKVLPYFHFYR---GADGLVDSFSCSLAKLQKLKDAIATHNK 188          
BLAST of Gcaud9821.t1 vs. uniprot
Match: A0A7J7DQ87_TRIWF (Thioredoxin-like 2 chloroplastic n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7DQ87_TRIWF)

HSP 1 Score: 78.2 bits (191), Expect = 1.670e-14
Identity = 40/117 (34.19%), Postives = 68/117 (58.12%), Query Frame = 0
Query:   53 SPAQPLVGIESLQRAL--LTAPPNKLVVVMFHARWCRVCKTLAPKLFRVAEQFPDVLWLSIDFAELPNKPLCAQLGVKLLPTFRFYKPQADLDQAVDHFTTGPFGIKRLVEHLETQN 167
            +P   ++ I S Q  L  L+   ++LV+V F+  WC  C+ L PKL R+AE+ P++L+L ++F E  NKP+C  + VK+LP F FY+     D  ++ F+      +++ + + T N
Sbjct:   88 NPRPNMIDIHSTQEFLSTLSEAGDRLVIVDFYGTWCASCRALFPKLCRIAEEHPEILFLKVNFDE--NKPMCKSMNVKVLPYFHFYR---GADGQLEAFSCSLAKFQKIKDAIATHN 199          
BLAST of Gcaud9821.t1 vs. uniprot
Match: A0A7C9E3M8_OPUST (Thioredoxin domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9E3M8_OPUST)

HSP 1 Score: 77.8 bits (190), Expect = 2.920e-14
Identity = 42/119 (35.29%), Postives = 67/119 (56.30%), Query Frame = 0
Query:   58 LVGIESLQRAL--LTAPPNKLVVVMFHARWCRVCKTLAPKLFRVAEQFPDVLWLSIDFAELPNKPLCAQLGVKLLPTFRFYKPQADLDQAVDHFTTGPFGIKRLVEHLETQNQSGVQGS 174
            ++ I S +  L  L+A   +LVVV F+  WC  C+ L PKL R+A + P++L+L ++F E  NK +C  + VK+LP F  Y+     +  V+ F+      ++L E +ET N +G   S
Sbjct:   90 MIDIHSTEEFLSALSAAGERLVVVEFYGTWCASCRALFPKLCRLANEHPEILFLKVNFDE--NKAMCKSMNVKVLPYFHLYR---GAEGQVESFSCSLAKFQKLKEAIETHNPAGGNSS 203          
BLAST of Gcaud9821.t1 vs. uniprot
Match: A0A200QDE7_9MAGN (Thioredoxin n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QDE7_9MAGN)

HSP 1 Score: 77.4 bits (189), Expect = 3.540e-14
Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 0
Query:   58 LVGIESLQRAL--LTAPPNKLVVVMFHARWCRVCKTLAPKLFRVAEQFPDVLWLSIDFAELPNKPLCAQLGVKLLPTFRFYK 137
            ++ I S Q  L  L+    KLV+V F+  WC  C+ L PKL R+A++ PD+L+L ++F E  NKP+C  L VK+LP F FY+
Sbjct:   93 MIDIHSTQDFLNALSQAGEKLVIVEFYGTWCGSCRALFPKLCRIAQENPDILFLKVNFDE--NKPMCKSLNVKVLPYFHFYR 172          
BLAST of Gcaud9821.t1 vs. uniprot
Match: A4S468_OSTLU (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S468_OSTLU)

HSP 1 Score: 75.1 bits (183), Expect = 3.790e-14
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 0
Query:   68 LLTAPPNKLVVVMFHARWCRVCKTLAPKLFRVAEQFPDVLWLSIDFAELPNKPLCAQLGVKLLPTFRFYK 137
            +L    +KLVVV  +ARWC  C+ L PKL ++A ++PDV+++ ++F    NK LC  LGVK+LP F+FY+
Sbjct:   43 VLNEHSDKLVVVDVYARWCGACRALYPKLCKIAAEYPDVVFVKVNFDA--NKDLCKSLGVKVLPYFKFYR 110          
The following BLAST results are available for this feature:
BLAST of Gcaud9821.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXB2_9FLOR1.470e-8271.01Thioredoxin-like 2, chloroplastic n=1 Tax=Gracilar... [more]
A0A2V3IXE9_9FLOR1.900e-7465.50Thioredoxin-like 2-1, chloroplastic n=1 Tax=Gracil... [more]
A0A0K9NUL0_ZOSMR9.390e-1534.82Putative Thioredoxin n=1 Tax=Zostera marina TaxID=... [more]
A0A068TPQ5_COFCA1.030e-1437.50Thioredoxin domain-containing protein n=5 Tax=Coff... [more]
A0A022Q005_ERYGU1.070e-1435.64Thioredoxin domain-containing protein n=1 Tax=Eryt... [more]
A0A2G9HFQ8_9LAMI1.590e-1435.40Thioredoxin n=1 Tax=Handroanthus impetiginosus Tax... [more]
A0A7J7DQ87_TRIWF1.670e-1434.19Thioredoxin-like 2 chloroplastic n=1 Tax=Tripteryg... [more]
A0A7C9E3M8_OPUST2.920e-1435.29Thioredoxin domain-containing protein n=1 Tax=Opun... [more]
A0A200QDE7_9MAGN3.540e-1445.12Thioredoxin n=1 Tax=Macleaya cordata TaxID=56857 R... [more]
A4S468_OSTLU3.790e-1447.14Thioredoxin domain-containing protein (Fragment) n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 73..145
e-value: 1.8E-13
score: 50.4
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 31..168
score: 12.078241
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 60..168
e-value: 5.2E-18
score: 66.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availablePANTHERPTHR43601:SF10THIOREDOXIN-LIKE 2-2, CHLOROPLASTICcoord: 17..169
NoneNo IPR availablePANTHERPTHR43601THIOREDOXIN, MITOCHONDRIALcoord: 17..169
NoneNo IPR availableCDDcd02947TRX_familycoord: 74..164
e-value: 2.0166E-18
score: 73.7464
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 56..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_155_length_42800_cov_4.630125contigNODE_155_length_42800_cov_4.630125:12094..12621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9821.t1Gcaud9821.t1Gracilaria caudata M_176_S67 malemRNANODE_155_length_42800_cov_4.630125 12094..12621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9821.t1 ID=Gcaud9821.t1|Name=Gcaud9821.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=176bp
MLSAFTPSTPLRISPSVQPHTSRCHRRPPQLSVATPPPPLRPSDKSPSHE
HASPAQPLVGIESLQRALLTAPPNKLVVVMFHARWCRVCKTLAPKLFRVA
EQFPDVLWLSIDFAELPNKPLCAQLGVKLLPTFRFYKPQADLDQAVDHFT
TGPFGIKRLVEHLETQNQSGVQGSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf