Gcaud982.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud982.t1
Unique NameGcaud982.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length186
Homology
BLAST of Gcaud982.t1 vs. uniprot
Match: R7QQN0_CHOCR (Lactamase_B domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQN0_CHOCR)

HSP 1 Score: 154 bits (388), Expect = 3.170e-44
Identity = 71/159 (44.65%), Postives = 102/159 (64.15%), Query Frame = 0
Query:   10 LKLFTIIAASGTCSKNPALYSFSIGSIPALVVHDGTINNPVSQFSALDPAVVRSYSAAFRPSFPFKLSTNPVILEMPYGRVLIETGAIGALQLPAFADTGKLITNMRAAGIDPCSIRHILLTHAHVGHGTGLVDGEGNKLFPNATVYISQIDHEFWFAS 168
            L + ++ AA+ TCS NP+ + FS G I  +VV DG     V+ FS  + A+ R+Y A+FR S P  +  N  I++MP GRVL++ G+    + P FA+ G+L+ NMRAAGI P SI+ ++ THAH  H  G++  +G + FPNA VYI ++DHEFW  S
Sbjct:    8 LAILSVAAATPTCSNNPSFHRFSFGGIQGVVVSDGPALFDVNPFSVPNAALKRNYDASFRSSSPLVIQQNVAIVDMPAGRVLVDAGSFNIPEFPQFANAGRLLANMRAAGIAPESIQAVVFTHAHADHVAGVITADGKRAFPNAHVYIDKVDHEFWTQS 166          
BLAST of Gcaud982.t1 vs. uniprot
Match: R7QPL5_CHOCR (Lactamase_B domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPL5_CHOCR)

HSP 1 Score: 138 bits (347), Expect = 1.760e-36
Identity = 70/173 (40.46%), Postives = 99/173 (57.23%), Query Frame = 0
Query:    9 LLKLFTIIAASGTCSKNPALYSFSIGSIPALVVHDGTINNPVSQFSALDPAVVRSYSAAFRPSFPFKLSTNPVILEMPYGRVLIETGAIGALQLPAFADTGKLITNMRAAGIDPCSIRHILLTHAHVGHGTGLVDGEGNKLFPNATVYISQIDHEFWFA-SPPQLNGTDFPAD 180
            L+ L   +AA+ TCS NPA   FS G I  L+V DG      + F   D  V RS  A+FR   P     N  I+++P  RV+++ G++   + P F + G+LI+NM+AAG++P SI  +L THAH  H +G+   +G   FPNA +YIS++DHEFW   + P L     P D
Sbjct:    7 LVSLIATVAATSTCSDNPAFRRFSFGGIKGLIVSDGPAIFTENPFLVPDAVVRRSRRASFRSVSPLIGQQNVAIIDLPDARVMVDAGSVNIPEFPQFRNAGRLISNMKAAGVEPESINAVLFTHAHGDHVSGVTTVDGKAAFPNAKLYISKVDHEFWTQENVPNLKPEVIPND 179          
BLAST of Gcaud982.t1 vs. uniprot
Match: A0A2V3IQV3_9FLOR (Lactamase_B domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQV3_9FLOR)

HSP 1 Score: 130 bits (326), Expect = 2.830e-33
Identity = 65/158 (41.14%), Postives = 96/158 (60.76%), Query Frame = 0
Query:   16 IAASGT---CSKNPALYSFSIGSIPALVVHDGTINNPVSQFSALDPAVVRSYSAAFRPSFPFKLSTNPVILEMP-YGRVLIETGAIGALQLPAFADTGKLITNMRAAGIDPCSIRHILLTHAHVGHGTGLVDGEGNKLFPNATVYISQIDHEFWFASP 169
            +AAS +   CS N  ++ F++ +I  ++  DG I    + FS  D AV  SYS  FR + P     N +++++P  GRVL++TG    +  P FA TG L+ N+RA  + P SI  +LLTH H  H  GLVD +GN++F +ATVY+ +I+H+FW A P
Sbjct:   22 VAASSSRSQCSANAYVHHFNLNNISGIITSDGPIRQSQNFFSVPDAAVTLSYSFLFRSTSPIVWQQNILLIDLPNIGRVLVDTGLNARVPNPLFAGTGLLMRNLRAIHVSPDSIDVVLLTHGHPDHVAGLVDDDGNRVFRHATVYVGEIEHDFWTADP 179          
BLAST of Gcaud982.t1 vs. uniprot
Match: A0A0Q6F871_9HYPH (Lactamase_B domain-containing protein n=1 Tax=Aurantimonas sp. Leaf443 TaxID=1736378 RepID=A0A0Q6F871_9HYPH)

HSP 1 Score: 103 bits (256), Expect = 4.660e-23
Identity = 55/152 (36.18%), Postives = 84/152 (55.26%), Query Frame = 0
Query:   17 AASGTCSKNPALYSFSIGSIPALVVHDGTIN--NPVSQFSALDPAVVRSY-SAAFRPSFPFKLSTNPVILEMPYGRVLIETGAIGALQLPAFADTGKLITNMRAAGIDPCSIRHILLTHAHVGHGTGLVDGEGNKLFPNATVYISQIDHEFW 165
            AA    +K P  Y F IG   A +V DG +N  +  +QF    P V++      F P  P  L  N ++L      VL +TG   A       ++G+L+ +++AAGIDP +I  ++LTHAH+ H  G++  +G++ FPNA +Y+SQ D +FW
Sbjct:   38 AAPMLGTKQPGWYRFKIGGFEATIVSDGRLNLGSAEAQFPGAQPTVIKEILDEEFLPVAPMMLEQNALVLNTGDKLVLFDTGMGTAKTFGP--ESGRLLASLKAAGIDPATIDAVILTHAHLDHCWGIMADDGSRNFPNAQIYMSQADFDFW 187          
BLAST of Gcaud982.t1 vs. uniprot
Match: A0A2U8WMJ2_9HYPH (MBL fold metallo-hydrolase n=28 Tax=Methylobacteriaceae TaxID=119045 RepID=A0A2U8WMJ2_9HYPH)

HSP 1 Score: 100 bits (249), Expect = 4.420e-22
Identity = 61/146 (41.78%), Postives = 84/146 (57.53%), Query Frame = 0
Query:   23 SKNPALYSFSIGSIPALVVHDGTI--NNPVSQFSALDPAVVRSY-SAAFRPSFPFKLSTNPVILEMPYGRVLIETGAIGALQLPAFADTGKLITNMRAAGIDPCSIRHILLTHAHVGHGTGLVDGEGNKLFPNATVYISQIDHEFW 165
            S++P  Y F++G   A +V DGT+   +P + F  L PA + +  +A F P     L  N +IL      VL +TG +GAL+L     TGKL+T MR AGIDP  I  ++++HAHV H  G V  +G   FPNA  YISQ D ++W
Sbjct:   39 SQSPYFYRFTLGDAEATMVSDGTLPLGDPHANFLGLSPAEMDAQLNANFLPLSNAVLEQNILILNTGSKLVLFDTG-MGALKLFG-PTTGKLLTTMRQAGIDPKDIDAVVMSHAHVDHCGGCVADDGTPHFPNAQFYISQADFDYW 182          
BLAST of Gcaud982.t1 vs. uniprot
Match: UPI0010FA2DB1 (MBL fold metallo-hydrolase n=1 Tax=Marimonas lutisalis TaxID=2545756 RepID=UPI0010FA2DB1)

HSP 1 Score: 98.2 bits (243), Expect = 3.050e-21
Identity = 56/162 (34.57%), Postives = 82/162 (50.62%), Query Frame = 0
Query:   23 SKNPALYSFSIGSIPALVVHDGTINNPVSQF--SALDPAVVRSYSAAFRPSFPFKLSTNPVILEMPYGRVLIETGAIGALQLPAFADTGKLITNMRAAGIDPCSIRHILLTHAHVGHGTGLVDGEGNKLFPNATVYISQIDHEFWFASPPQLNGTDFPADQQ 182
            + NPA + F++G     V+ DG    PV     +A + AVV    A +  S      TN V +E+   +VL++ G+        F+ TG+L+ NM AAGIDP SI H+ +THAH  H  G+ D     +FP+A  +I + +H +W      L     P DQQ
Sbjct:   36 AANPAHFRFTLGEAQVTVISDGFFTQPVDGLGVNAGEGAVVDFLKAHYLNSEQNYAHTNHVFVELGDAKVLVDVGSGSRF----FSTTGRLVANMEAAGIDPSSITHVFITHAHPDHIWGIRDDFDEAIFPDAAYFIGEAEHAYWMQD--DLANKVAPEDQQ 191          
BLAST of Gcaud982.t1 vs. uniprot
Match: A0A840A9E7_9PROT (Glyoxylase-like metal-dependent hydrolase (Beta-lactamase superfamily II) n=3 Tax=Roseococcus TaxID=35812 RepID=A0A840A9E7_9PROT)

HSP 1 Score: 98.2 bits (243), Expect = 3.420e-21
Identity = 58/155 (37.42%), Postives = 80/155 (51.61%), Query Frame = 0
Query:   17 AASGTCSKNPALYSFSIGSIPALVVHDG--TINNPVSQFSALDPA-VVRSYSAAFRPSFPFKLSTNPVILEMPYGRVLIETG---AIGALQLPAFADTGKLITNMRAAGIDPCSIRHILLTHAHVGHGTGLVDGEGNKLFPNATVYISQIDHEFW 165
            AA    ++ PA Y F IGS  A V+ DG   +  P   F    P  + +    AF PS    L  N +++      VL +TG   ++G         TG+++ N+RAAGIDP  I  ++LTHAH  H  GLVD +G K+FPNA V + + D  FW
Sbjct:   29 AAPPVGTQVPAWYRFRIGSFEATVISDGHLPLGKPADGFPTAPPQELAQVLQDAFLPSESVVLEQNLLVVNTGTQMVLFDTGMGESMGDASRMFGPTTGRMVANLRAAGIDPARIDMVVLTHAHCDHCWGLVDAQGAKVFPNAQVALHEADLSFW 183          
BLAST of Gcaud982.t1 vs. uniprot
Match: A0A833GGZ9_9HYPH (MBL fold metallo-hydrolase n=1 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833GGZ9_9HYPH)

HSP 1 Score: 97.8 bits (242), Expect = 4.560e-21
Identity = 56/147 (38.10%), Postives = 79/147 (53.74%), Query Frame = 0
Query:   23 SKNPALYSFSIGSIPALVVHDGTINNPVSQFSALDPAVVRSYSAAFRPSF----PFKLSTNPVILEMPYGRVLIETGAIGALQLPAFADTGKLITNMRAAGIDPCSIRHILLTHAHVGHGTGLVDGEGNKLFPNATVYISQIDHEFW 165
            ++ PA Y F IG+I A  V DG ++    Q           +S     +F      KL  N ++L      +LI+TG  GA +L    DTG+L+ N++AAGIDP  I  + LTHAH  H  GL+  +G + FPNA +Y+SQ D +FW
Sbjct:   39 TQAPAYYRFRIGAIEATAVSDGPLDLGTPQPDIFKGVSKEEFSKTLADNFLSTDKVKLEQNALVLNTGERLILIDTGT-GAQKLMG-PDTGRLLNNLKAAGIDPKDIDAVALTHAHPDHCWGLLGADGQQNFPNAQIYMSQEDFDFW 183          
BLAST of Gcaud982.t1 vs. uniprot
Match: UPI001BCCE13B (MBL fold metallo-hydrolase n=1 Tax=Roseococcus sp. XZZS9 TaxID=2835040 RepID=UPI001BCCE13B)

HSP 1 Score: 95.9 bits (237), Expect = 2.440e-20
Identity = 59/158 (37.34%), Postives = 79/158 (50.00%), Query Frame = 0
Query:   26 PALYSFSIGSIPALVVHDGTI--NNPVSQFSALDPAVVRSYSAA-FRPSFPFKLSTNPVILEMPYGRVLIETG---AIGALQLPAFADTGKLITNMRAAGIDPCSIRHILLTHAHVGHGTGLVDGEGNKLFPNATVYISQIDHEFWFASPPQLNGTDF 177
            PA Y F IG   A V+ DG +    P   F A  PA + +   + F P     L  N +I+      VL +TG   ++G         TG+L+ NMRAAGI+P  I  ++LTHAH  H   LVD +GN+ FPNA V +S+ D  +W   P    G  F
Sbjct:   37 PAWYRFRIGEFEATVISDGRLPLGEPGPAFPASPPAEITALMQSNFLPVNSANLEQNALIVNTGRHLVLFDTGMGDSMGPASQMFGPTTGRLLRNMRAAGIEPAQIDMVILTHAHCDHCWALVDAQGNRNFPNAQVALSETDLRYW-TDPANKTGPAF 193          
BLAST of Gcaud982.t1 vs. uniprot
Match: A0A4R0YJ78_9PROT (MBL fold metallo-hydrolase n=2 Tax=Roseococcus sp. SYP-B2431 TaxID=2496640 RepID=A0A4R0YJ78_9PROT)

HSP 1 Score: 95.9 bits (237), Expect = 2.610e-20
Identity = 58/158 (36.71%), Postives = 79/158 (50.00%), Query Frame = 0
Query:   26 PALYSFSIGSIPALVVHDGTI--NNPVSQFSALDPAVVRSYSAA-FRPSFPFKLSTNPVILEMPYGRVLIETG---AIGALQLPAFADTGKLITNMRAAGIDPCSIRHILLTHAHVGHGTGLVDGEGNKLFPNATVYISQIDHEFWFASPPQLNGTDF 177
            PA + F IG   A +V DG +    P   F A  P  + +   A F P     L  N +I+      VL +TG   ++G         TG+L+ NMRAAGI+P  I  ++LTHAH  H   LVD +GN+ FPNA V +++ D  FW   P    G +F
Sbjct:   42 PAWHRFRIGEFEATIVSDGRLPLGEPAPAFPASPPQEIAALMRANFLPVNAANLEQNALIVNTGRQLVLFDTGMGDSMGPASQMFGPTTGRLLRNMRAAGIEPSQIDMVILTHAHCDHCWALVDAQGNRNFPNAQVAVTEADLRFW-TDPANKRGPEF 198          
The following BLAST results are available for this feature:
BLAST of Gcaud982.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QQN0_CHOCR3.170e-4444.65Lactamase_B domain-containing protein n=1 Tax=Chon... [more]
R7QPL5_CHOCR1.760e-3640.46Lactamase_B domain-containing protein n=1 Tax=Chon... [more]
A0A2V3IQV3_9FLOR2.830e-3341.14Lactamase_B domain-containing protein n=1 Tax=Grac... [more]
A0A0Q6F871_9HYPH4.660e-2336.18Lactamase_B domain-containing protein n=1 Tax=Aura... [more]
A0A2U8WMJ2_9HYPH4.420e-2241.78MBL fold metallo-hydrolase n=28 Tax=Methylobacteri... [more]
UPI0010FA2DB13.050e-2134.57MBL fold metallo-hydrolase n=1 Tax=Marimonas lutis... [more]
A0A840A9E7_9PROT3.420e-2137.42Glyoxylase-like metal-dependent hydrolase (Beta-la... [more]
A0A833GGZ9_9HYPH4.560e-2138.10MBL fold metallo-hydrolase n=1 Tax=Pseudorhodoplan... [more]
UPI001BCCE13B2.440e-2037.34MBL fold metallo-hydrolase n=1 Tax=Roseococcus sp.... [more]
A0A4R0YJ78_9PROT2.610e-2036.71MBL fold metallo-hydrolase n=2 Tax=Roseococcus sp.... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 13..186
e-value: 5.4E-29
score: 103.2
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 25..167
NoneNo IPR availablePANTHERPTHR42978:SF6METALLO-BETA-LACTAMASE SUPERFAMILY PROTEINcoord: 24..169
NoneNo IPR availablePANTHERPTHR42978QUORUM-QUENCHING LACTONASE YTNP-RELATED-RELATEDcoord: 24..169
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..186
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2253_length_6299_cov_4.480026contigNODE_2253_length_6299_cov_4.480026:337..892 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud982.t1Gcaud982.t1Gracilaria caudata M_176_S67 malemRNANODE_2253_length_6299_cov_4.480026 337..892 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud982.t1 ID=Gcaud982.t1|Name=Gcaud982.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=186bp
MQILRLVFLLKLFTIIAASGTCSKNPALYSFSIGSIPALVVHDGTINNPV
SQFSALDPAVVRSYSAAFRPSFPFKLSTNPVILEMPYGRVLIETGAIGAL
QLPAFADTGKLITNMRAAGIDPCSIRHILLTHAHVGHGTGLVDGEGNKLF
PNATVYISQIDHEFWFASPPQLNGTDFPADQQDLFX
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036866RibonucZ/Hydroxyglut_hydro