Gcaud9805.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud9805.t1 vs. uniprot
Match: A0A2V3IEF5_9FLOR (tRNA-intron lyase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEF5_9FLOR) HSP 1 Score: 223 bits (567), Expect = 2.760e-69 Identity = 113/187 (60.43%), Postives = 131/187 (70.05%), Query Frame = 0
Query: 143 MRQLLQIQ------ASSTDFDRTDVEHLQLTFVEAFYASFVTKQIVIHDMHSKKPLNDRQQVWRLFCDRSDKFPFMFVAYCRYRAAGWLPKSALKYGANWVLYPTKSYTHTHAPYCVVLQFSTPGEEPPIASSWISLQNRLRLVKNVAKNLVVTRIHAEKPVDFASSISDTFAVVKVTELTIDRWLP 323
MRQLL +Q A R DVEHLQL V+AFY +FVT+QIVI D + D WRLFC R +FP +FVAY RYRAAGWLPKS LKYG +WVLYPTK Y HTHAPYCVV FS + + SSWI+LQNRLRLV NVAK LV+ R+H +P+D A+SIS TF V++TELTIDRWLP
Sbjct: 1 MRQLLALQPAAAAAAGEAAQSRVDVEHLQLPLVDAFYLAFVTRQIVISDAAA-----DAAAAWRLFCARCARFPLLFVAYARYRAAGWLPKSGLKYGVHWVLYPTKRYAHTHAPYCVVFHFSNRPNDARLDSSWIALQNRLRLVNNVAKTLVIARLHVAEPLDLAASISRTFDAVRLTELTIDRWLP 182
BLAST of Gcaud9805.t1 vs. uniprot
Match: M2XJJ3_GALSU (tRNA-intron lyase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XJJ3_GALSU) HSP 1 Score: 137 bits (345), Expect = 4.130e-34 Identity = 107/342 (31.29%), Postives = 161/342 (47.08%), Query Frame = 0
Query: 24 SIHSLRLELHRRNLSTSGLRDELESRLRQACSSDTTPDLSVPRSFNVWAPFSTLHDASASNAPHPIPALLRHRSVWVCSDAYVAAAWQRTS-CGKANLSRSAPSYNA----LVHSQHANWKGRAMRQL--LQIQASSTDFDRT---------------DV--------------EHLQLTFVEAFYASFVTKQIVIHDMHSK-KPLNDRQQVWRLFCDRSDKFPFMFVAYCRYRAAGWLPKSALKYGANWVLYPTKSYTHTHAPYCVVLQF---STPGEEPPIASSWISLQNRLRLVKNVAKNLVVTRIHAEKPVDFASSIS----DTFAVVKVTELTIDRW 321
S+ LR L + L G + +L RL A + D D S+ +F+ S + AS P +L H SVW+ ++ S GK +LSRS P + + + A + + RQ L+IQ + D + + D+ EHLQL EAFYASF++KQ+ I D L D + + FC FP+ YC Y+ GW P S LKYG ++VLY +H H+P+CV++ +PG+ + SWISLQNRLRLVK VAK L++ +H +KP A I ++ ++++E+ ++RW
Sbjct: 10 SVPILRYRLCQLGLDYKGTKKDLVQRLVAASTQDQ--DQSLEETFHASTGNSIVRGASKER---PCKGILIHNSVWITQREHMMELGSTLSGFGKGSLSRSVPVFGTEAPEALKGKVARQRTKLTRQRESLEIQVARLDSENSHRALVSSSEGDILAVDIGPLLSSPTKDNIFEEHLQLCLWEAFYASFISKQLNIFDKTDPITKLTDPDRTYAYFCRLIPHFPYYLAIYCYYKERGWSPHSGLKYGVDFVLYYGSVESHVHSPFCVLVDIHKDDSPGD-CLLEKSWISLQNRLRLVKQVAKQLLL--VHVQKPKGLADEILFSRWESCLSLEISEMRVERW 343
BLAST of Gcaud9805.t1 vs. uniprot
Match: A0A1X6PJ52_PORUM (tRNA-intron lyase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PJ52_PORUM) HSP 1 Score: 102 bits (255), Expect = 8.550e-21 Identity = 75/226 (33.19%), Postives = 104/226 (46.02%), Query Frame = 0
Query: 139 KGRAMRQLLQIQASSTDF---------DRTDVEHLQLTFVEAFYASFVT-----KQIVIHDMHSKKPLNDRQQV-----------WRLFCDRSD---KFPFMFVAYCRYRAAGWLPKSALKYGANWVLYPTKSYTHTHAPYCVVLQF--------STPGEE----PPIASSWISLQNRLRLVKNVAKNLVVTRIHAEKPVDFASSISDTFAVVK---VTELTIDRW 321
KGRA+R L ++ +S RT VEHL L EA+YA++ + + + + + + W C RS +F + AY YR AGW P+S KYG +WVLY + H HA +CVVL S GE P+ +SW+++QNRLRLVKNVAK L+ T + ++D A + V EL IDRW
Sbjct: 252 KGRALRNLSSLEGASAAXXXXAVERAAQRTAVEHLALGLPEAYYAAYEAAPPRLRLVTLRGVAAAAAADXXXXXXXXXXXXXXXXWAACCARSPGGVRFAAAYAAYRFYRGAGWAPRSGAKYGVDWVLYKVGAARHAHASFCVVLSVAGLPDGGGSGGGEAGALGAPLDASWVAVQNRLRLVKNVAKTLLYTAVSDGGGALTPGGVADRAAFLARATVVELRIDRW 477
BLAST of Gcaud9805.t1 vs. uniprot
Match: V4AW24_LOTGI (tRNA-intron lyase n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AW24_LOTGI) HSP 1 Score: 87.8 bits (216), Expect = 1.630e-16 Identity = 49/167 (29.34%), Postives = 92/167 (55.09%), Query Frame = 0
Query: 162 EHLQLTFVEAFYASFVTKQIVIHDMHSKKPLNDRQQVWRLFCDRSDKFPFMFVAYCRYRAAGWLPKSALKYGANWVLYPTKSYTHTHAPYCVVLQFSTPGEEPPIAS------SWISLQNRLRLVKNVAKNLVVTRIHAEKPVDFASSISDTFAVVKVTELTIDRWL 322
E+LQL+FVEAF+ + +++ + S++ + D + +W+LFC + F ++ Y +R+ GW+PKS LK+G +++LY + H Y V++Q+ G P++ SW SL R+ ++V K +++ + K + + SD + KV E+ + RW+
Sbjct: 82 EYLQLSFVEAFFLCYGLGCLIVQN--SERNI-DIKSLWKLFCTKQRNFIPSYICYHYFRSKGWVPKSGLKFGCDYILYKVGPPFY-HGSYSVIIQYVEEGSLKPVSGYYQRKLSWRSLCGLNRITEHVGKEVLICYVIKPKSISDETFSSDFISHFKVKEIMLSRWV 244
BLAST of Gcaud9805.t1 vs. uniprot
Match: A0A6J2VNC9_CHACN (tRNA-splicing endonuclease subunit Sen2 n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2VNC9_CHACN) HSP 1 Score: 81.3 bits (199), Expect = 2.030e-13 Identity = 55/165 (33.33%), Postives = 85/165 (51.52%), Query Frame = 0
Query: 161 VEHLQLTFVEAFYASFVTKQIVIHDMHSKKPLNDRQQVWRLFCDRSDKFPFMFVAYCRYRAAGWLPKSALKYGANWVLYPTKSYTHTHAPYCVVLQFSTPGEEPPIAS--SWISLQNRLRLVKNVAKNLVVTRIHAEKPVDF-ASSISDTFAVVKVTELTIDRWL 322
+E+LQL+ EAF+ + + IH HS +PL +VW+LFC F +V Y +R+ GW+PKS +KYG +++LY K HA Y VV++ + SW SL R+ NV+K L++ + + A S + +KV EL + RW+
Sbjct: 311 LEYLQLSLEEAFFLVYALGCLSIH--HSGEPLFI-SEVWKLFCSVQANFESTYVVYHYFRSKGWVPKSGIKYGTDFILY-RKGPPFYHASYSVVVERVDDSLRGALLRPFSWRSLAALCRITGNVSKELMLCYVIVPSDMTTEAMSSPECLKRIKVQELIMSRWI 471
BLAST of Gcaud9805.t1 vs. uniprot
Match: A0A2G4T9M0_RHIZD (tRNA-splicing endonuclease subunit Sen2 n=5 Tax=Rhizopus TaxID=4842 RepID=A0A2G4T9M0_RHIZD) HSP 1 Score: 79.7 bits (195), Expect = 2.040e-13 Identity = 63/225 (28.00%), Postives = 100/225 (44.44%), Query Frame = 0
Query: 116 GKANLSRSAPSYNALVHSQH-------ANWKGRAMRQLLQIQASSTDFDR------------TDVEHLQLTFVEAFYASFVTKQIVIHDMHSKKPLNDRQQVWRLFCDRSDKFPFMFVAYCRYRAAGWLPKSALKYGANWVLYPTKSYTHTHAPYCVVLQFSTPGEEPPIASSWISLQNRLRLVKNVAKNLVVTRIHAEKPVDFASSISDTFAVVKVTELTIDRW 321
GK +LSRS P++ + QH + + R+ + QA D D+ D+E LQL EA++ F K + I + SK+ L +Q W FC F + + Y YR+ GW+PKS +K+G ++VLY + HA Y V++ G+ P SW L R+ V K LV+ + + +D + ++ E+ RW
Sbjct: 71 GKGSLSRSEPTWLSRTIEQHKLSLEDVTVERRKKRREKRRNQAIKDDQDKYQPDQLLDLVEHKDMETLQLDPCEAYFLIFALKALDIRN--SKQKLLSIEQCWTKFCQNDPTFHYTYAVYHYYRSLGWVPKSGIKFGVDFVLYKLGP-AYRHADYAVIIIPLQKGQ-PEDTKSWQWLLRLNRICTQVKKTLVLCYVTIPESIDRIENY-------RIQEVVYRRW 284
BLAST of Gcaud9805.t1 vs. uniprot
Match: A0A1S3K7C4_LINUN (tRNA-intron lyase n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K7C4_LINUN) HSP 1 Score: 80.5 bits (197), Expect = 4.680e-13 Identity = 53/162 (32.72%), Postives = 83/162 (51.23%), Query Frame = 0
Query: 162 EHLQLTFVEAFYASFVTKQIVIHDMHSKKPLNDRQQVWRLFCDRSDKFPFMFVAYCRYRAAGWLPKSALKYGANWVLYPTKSYTHTHAPYCVVLQFSTPGEEPPIASSWISLQNRLRLVKNVAKNLVVTRIHAEKPV-DFASSISDTFAVVKVTELTIDRWL 322
E+L L+ EAF+ S+ +V+HD SKK LN ++WR FC R F ++AY R+ GW+PK+ +KYGA ++LY + + VVL E SW SL R+ + V+K +++ + + V D S K+ E+ I+RW+
Sbjct: 506 EYLCLSLEEAFFLSYGLGCLVVHD-ESKKKLN-LTEMWRKFCSRQKNFLNNYIAYHSLRSKGWVPKTGIKYGAEFILYKQGPPFYHSSYSVVVLPVKEENLEQEKLLSWTSLAGMNRVTEQVSKEVLLCYVIRPRGVTDEDLSSPACVPKFKIMEVIIERWV 665
BLAST of Gcaud9805.t1 vs. uniprot
Match: UPI001EE5C6C3 (LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit Sen2-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5C6C3) HSP 1 Score: 79.7 bits (195), Expect = 8.060e-13 Identity = 55/169 (32.54%), Postives = 88/169 (52.07%), Query Frame = 0
Query: 161 VEHLQLTFVEAFYASFVTKQIVIHDMHSKKPLNDRQQVWRLFCDRSDKFPFMFVAYCRYRAAGWLPKSALKYGANWVLYPTKSYTHTHAPYCVVLQF---STPGEEPPIAS---SWISLQNRLRLVKNVAKNLVVTRIHAEKPVDFASSISDT-FAVVKVTELTIDRWL 322
VEHL L+F E F+ S+ +V+ D +K LN +W+ FC D F ++AY YR+ GW+PK+ LK+G ++++Y + H Y V+++ T E P SWISL R+ ++VAK L++ + + V S +S KV E+ + RW+
Sbjct: 441 VEHLLLSFEETFFLSYGLGCLVVTD-EKQKNLN-LSSLWQRFCSSRDDFCANYIAYHYYRSKGWVPKTGLKFGCDFIVYK-EGPPFYHGSYSVLVRLVDEETLIEHPEYTHRPLSWISLAGLNRITEHVAKELLMCYVIKPRGVSEESLMSPACIPQFKVQEILVTRWV 606
BLAST of Gcaud9805.t1 vs. uniprot
Match: UPI000C6E57A1 (tRNA-splicing endonuclease subunit Sen2-like isoform X1 n=2 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E57A1) HSP 1 Score: 75.9 bits (185), Expect = 3.900e-12 Identity = 58/221 (26.24%), Postives = 110/221 (49.77%), Query Frame = 0
Query: 111 QRTSCGKANLSRSAPSYN----ALVHSQHANWKGRAMRQLLQIQASSTDFDRTDVEHLQLTFVEAFYASFVTKQIVIHDMHSKKPLNDRQQVWRLFC--DRSDKFPFMFVAYCRYRAAGWLPKSALKYGANWVLYPTKSYTHTHAPYCVVL-QFSTPGEEPPIASSWISLQNRLRLVKNVAKNLVVTRIHAEKPVDFAS-SISDTFAVVKVTELTIDRWLP 323
++ + G LS+ P ++ +L + N G + + SS + E L L F EAF+ S+ +++ + + + +++ +W+ FC +FP ++AY +R+ GW+ KS LKYG ++VLY + H+ YCVV+ + S+ E + +W+ L + R+ ++VAK+ ++ + K D S TF + E+ + RW+P
Sbjct: 64 EKGNFGIGYLSKDIPEFSDKRRSLSNFDEINEDGECQQHCQETSLSS----KNQYETLYLMFEEAFFLSYGLGCLIVKESNKELSISE---MWKKFCWLALDGRFPCKYIAYHYFRSKGWIVKSGLKYGTDFVLYKDGPAFY-HSTYCVVVREVSSDFNEQSL--TWLELLSLNRVNEHVAKDTLLCYVMKNKDTDLLDPSCIPTF---NIQEVLLRRWIP 271
BLAST of Gcaud9805.t1 vs. uniprot
Match: UPI001458F9ED (LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit Sen2-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458F9ED) HSP 1 Score: 77.4 bits (189), Expect = 4.640e-12 Identity = 54/172 (31.40%), Postives = 88/172 (51.16%), Query Frame = 0
Query: 162 EHLQLTFVEAFYASFVTKQIVIHDMHSKKPLNDRQQVWRLFCDRSDKFPFMFVAYCRYRAAGWLPKSALKYGANWVLYPTKSYTHTHAPYCVVLQFSTPGEE---PPIAS------SWISLQNRLRLVKNVAKNLVVTRIHAEKPVDFASSISDT-FAVVKVTELTIDRWLP 323
E L L+ EAF+ SF +++ D ++K L D Q +W FC+ F +V Y +R+ GW+PKS LK+G +++LY + H Y VV++ E P +A SWISL R+ ++VAK L++ + K + S + KV ++ ++RW+P
Sbjct: 422 EFLHLSLEEAFFLSFGLGCLIVTD--NEKTL-DLQSLWTRFCETQQDFLPNYVVYHYFRSLGWVPKSGLKFGTDFILYKVGPPFY-HGSYSVVVKMIDEEEMHVVPEVAGVKGRDFSWISLAGLNRITEHVAKELMLCYVIKPKGLTMEEMKSPRCLSKFKVQQIAVNRWIP 589 The following BLAST results are available for this feature:
BLAST of Gcaud9805.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud9805.t1 ID=Gcaud9805.t1|Name=Gcaud9805.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=324bpback to top |