Gcaud9749.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9749.t1
Unique NameGcaud9749.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length566
Homology
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BLAST of Gcaud9749.t1 vs. uniprot
Match: A0A2V3J393_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J393_9FLOR)

HSP 1 Score: 224 bits (571), Expect = 1.180e-59
Identity = 180/431 (41.76%), Postives = 222/431 (51.51%), Query Frame = 0 
Query:   21 LPHTLSIINNVQNAIAAIEQRLEHNPSAQPPPPQRNEYPAQHGNNRDKIYSATVKHLEQPI------VHPQHNSASNLTAPT-VDADAVLSPQSTFSSLAIDEAVSVTSDYQVSTTFGSPVPRLSVSTTRSIADIVQHFESNTAPNPLSRDTSSTKHSSPSIAPIVDRFESEQRLSDASRP--------ATSIAPIVEQFQRSSNSKSSVS------------------FAHATDTFTTASKENTPALDDDV--------------------------------------DLSSVGATVDPSEFELIADEADRISQRALSVVSLSK-SERDVQKGATSSLPPSNASDPSVPP-------VKSNAADD-------EFEGSTVQVDALSKSLHVDADDLEVTDESVAHAIKTLDTYSIAAGVQTAKDEQTQPE 365
            LP TLS INNVQNA+A IEQRL H PSA PPPPQRNEYPA   N R+ +Y+AT+KHL++P+      + P + SA + T  T +  D  LS QSTFS   I+EAVSVTSDYQVST  GSP+PR+  S+TRSIADIVQHFES        RD      ++P IAPIVDR ++        R          +SIA IV+QFQ +     S S                   + + DT T        A   DV                                      DLSSVGA  DPSEFE + +E + I+QR  S  S++   ER   +  T     S +   SV P       V   A  D        FEGSTV VDALSKSL VDA+ LEVT+ESVA AI+TLD++S AAG++  + E   P+
Sbjct:   21 LPQTLSFINNVQNAVATIEQRLVHTPSAHPPPPQRNEYPAPPDNTREHMYAATIKHLDKPVLSTDLHIAPNNVSADHTTTNTRLSVDGSLSEQSTFS---IEEAVSVTSDYQVSTITGSPLPRIHGSSTRSIADIVQHFESTLQAQHSVRDNQLHPANAP-IAPIVDRLDTGNTSHSTPRDNAHFEQNARSSIASIVKQFQHAKQPTESNSNTXXXXXXXXXXXXXXXXXSPSKDTNTQQKNVREQAKQSDVPNDLESIERGSVGKRIASFNSQSAKSDTKDDEEETNDGDLSSVGAIADPSEFEFLHEETEGITQRTGSPSSINNIPERHHVEATTPPAAVSMSMGASVTPYVEKPAEVIGQATPDIQSSAKVPFEGSTVDVDALSKSLQVDAEALEVTEESVARAIQTLDSFSEAAGIEPQRSEIMDPQ 447
The following BLAST results are available for this feature:
BLAST of Gcaud9749.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J393_9FLOR1.180e-5941.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 417..440
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 527..552
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 354..565
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 445..480
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 504..522

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_555_length_22204_cov_4.024239contigNODE_555_length_22204_cov_4.024239:19860..22159 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9749.t1Gcaud9749.t1Gracilaria caudata M_176_S67 malemRNANODE_555_length_22204_cov_4.024239 19860..22159 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9749.t1 ID=Gcaud9749.t1|Name=Gcaud9749.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=566bp
MDATTSSTSSPRQHAPSRRELPHTLSIINNVQNAIAAIEQRLEHNPSAQP
PPPQRNEYPAQHGNNRDKIYSATVKHLEQPIVHPQHNSASNLTAPTVDAD
AVLSPQSTFSSLAIDEAVSVTSDYQVSTTFGSPVPRLSVSTTRSIADIVQ
HFESNTAPNPLSRDTSSTKHSSPSIAPIVDRFESEQRLSDASRPATSIAP
IVEQFQRSSNSKSSVSFAHATDTFTTASKENTPALDDDVDLSSVGATVDP
SEFELIADEADRISQRALSVVSLSKSERDVQKGATSSLPPSNASDPSVPP
VKSNAADDEFEGSTVQVDALSKSLHVDADDLEVTDESVAHAIKTLDTYSI
AAGVQTAKDEQTQPEGEPASAEERSETITSAHGADITRSDENTQTYDELS
PGEPVVAVSVRQTASSTAEDVREHVEDDSNAAHELVEKVAKNDANGVSDS
ASETISTPPSASVRQGAGDVSRSTMAPKPLSTRTDAAAEEVGDTPAQEDI
SPVDVQDLRVDSEVKKEAEESLLETASAANADENSDAVQDSEKVTQCGES
GQFNCFKHKDGNTGE*
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