Gcaud9737.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9737.t1
Unique NameGcaud9737.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length496
Homology
[Close]
BLAST of Gcaud9737.t1 vs. uniprot
Match: A0A2V3J658_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J658_9FLOR)

HSP 1 Score: 97.1 bits (240), Expect = 1.550e-18
Identity = 95/297 (31.99%), Postives = 150/297 (50.51%), Query Frame = 0 
Query:    1 MDDLGIIIKNGKNTADRVARTIWYDDGSKSRLQTFSESCAENPYASQTIPESIALEYDSNANKN-----------------ATPQNDANLDTNHPS--NDSDTSEAPV-PEEQTDNELAEF-----FTAHEDEISPNPSRNEASQHARTDTRNEIPHSANPYSPTNTEKMDMSDLYLAITQVNTRLENI-DENVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMHKKSTELRQLAQDNDNRFRTIEPKLAQEPPLLNARLPPPENHRAEAFANRNERTGNTS 271
            M+ +GI +K+ +N   RVARTIWY+D +K  L+ F +S   +PYAS+ +P+ I   ++ + N+                  AT  N+  +D+   +  N  D +E  + P+ +T +   +          +DEI+  P +       R     ++ H +  +SP   E + + DL+ AI+ +NTR +++ DE +    XXXXXXXXXXXXXXX                        +MHKKS E+R+L+QD+D RFR +E KL  E PL+N ++PP E  RA +   +   +G  S
Sbjct:   60 MESMGIALKDARNPIVRVARTIWYEDATKPELEAFMDSYKSHPYASRVMPDDIMFSHNLHQNQGDPKPSEDREAAGTEDHTATSPNNPVVDSGEQTRFNLEDGNEPNILPQLETTSNSKQMPVQSEILVEDDEITEAPLK-------RVKHPKQLQHQSQNWSPFKDE-LKLDDLFKAISAMNTRFDSVLDETIKRMNXXXXXXXXXXXXXXXD-----------------------AMHKKSVEIRRLSQDSDTRFRRMERKLGTEQPLVNVKIPPSEGPRAHSSHRQQRDSGGQS 325
The following BLAST results are available for this feature:
BLAST of Gcaud9737.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J658_9FLOR1.550e-1831.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2334_length_6052_cov_4.565845contigNODE_2334_length_6052_cov_4.565845:4309..5794 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9737.t1Gcaud9737.t1Gracilaria caudata M_176_S67 malemRNANODE_2334_length_6052_cov_4.565845 4309..5794 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9737.t1 ID=Gcaud9737.t1|Name=Gcaud9737.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=496bp
MDDLGIIIKNGKNTADRVARTIWYDDGSKSRLQTFSESCAENPYASQTIP
ESIALEYDSNANKNATPQNDANLDTNHPSNDSDTSEAPVPEEQTDNELAE
FFTAHEDEISPNPSRNEASQHARTDTRNEIPHSANPYSPTNTEKMDMSDL
YLAITQVNTRLENIDENVHTRLDIIDDHVRHRLQNIQEEQMKDMNNLFDS
KFYEINKKIESSMHKKSTELRQLAQDNDNRFRTIEPKLAQEPPLLNARLP
PPENHRAEAFANRNERTGNTSFHTAIPNTLPSRPRPNRLDSHTAQRLSFN
TPHENPNWTPPASHAAAGQTPLPVTPSEHSGYTRITERLRDIAATDYNDQ
SMKRFQKGSANINQVFKDSRYKGHASESWVQFIKRFEQSVFLTSFLTPDE
ALVALPLAMEGGALIYFNDYVAHICRDYNHAKELMAHKYHDHTHQNRVLD
KLRDIRLSKYFDGKTTIEEAFNEMIVDIDTMAVHIPRQLRNDHSRX
back to top