Gcaud9730.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9730.t2
Unique NameGcaud9730.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length167
Homology
BLAST of Gcaud9730.t2 vs. uniprot
Match: A0A2V3J081_9FLOR (S-adenosylmethionine carrier 1, chloroplastic/mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J081_9FLOR)

HSP 1 Score: 211 bits (536), Expect = 7.320e-65
Identity = 112/134 (83.58%), Postives = 124/134 (92.54%), Query Frame = 0
Query:    1 MYAGLGAQLARDVPYAAVEFVLYENLKARLKADKRMAKRARSHSLLVGGVSGAVAALVSNPMDVVKTRLMTQSACSAVRYRGVAHALSAVAASEGVSAFAKGIAPRIAAKTLQSALFFAAYERVKGTLARMLGV 134
            +YAGLGAQLARDVPYAAVEFVLYENLKARLK+D+R AKRAR+HSL+VGGVSGAVAA+VSNPMDVVKTRLMTQ+A SAVRYR VAHA ++VA  EG+ AFAKGIAPRIAAKTLQSALFFAAYE+VK TLA +L V
Sbjct:  201 LYAGLGAQLARDVPYAAVEFVLYENLKARLKSDQRFAKRARAHSLMVGGVSGAVAAIVSNPMDVVKTRLMTQTATSAVRYRSVAHAFTSVAREEGIRAFAKGIAPRIAAKTLQSALFFAAYEKVKSTLAVLLRV 334          
BLAST of Gcaud9730.t2 vs. uniprot
Match: A0A7S1XCF3_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XCF3_9RHOD)

HSP 1 Score: 126 bits (316), Expect = 5.160e-32
Identity = 71/140 (50.71%), Postives = 93/140 (66.43%), Query Frame = 0
Query:    1 MYAGLGAQLARDVPYAAVEFVLYENLKARLKADKRMAKRA--------RSHSLLVGGVSGAVAALVSNPMDVVKTRLMTQSACSAVRYRGVAHALSAVAASEGVSAFAKGIAPRIAAKTLQSALFFAAYERVKGTLARML 132
            MY GLGAQL+RDVP+  VEF+ YENLK+ +   +     A        ++ S+LVG + GA+AALVSNPMDVVKTRLMTQ   +  RY+G+      +A  EG S F +G+APRI AK++QSALFF AYE ++  L + L
Sbjct:  196 MYRGLGAQLSRDVPFVMVEFLCYENLKSAVLNGRNPMSPASTSAMTLTQNESVLVGSICGAMAALVSNPMDVVKTRLMTQMPDAPRRYQGLIDCAMRIAQEEGPSTFLRGLAPRIVAKSMQSALFFVAYEALRNRLEKAL 335          
BLAST of Gcaud9730.t2 vs. uniprot
Match: A0A5J4YT10_PORPP (S-adenosylmethionine carrier 1, chloroplastic/mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YT10_PORPP)

HSP 1 Score: 105 bits (261), Expect = 2.030e-23
Identity = 80/206 (38.83%), Postives = 93/206 (45.15%), Query Frame = 0
Query:    1 MYAGLGAQLARDVPYAAVEFVLYENLK--ARLKADKRMAKRARSHSL--------LVGGVSGAVAALVSNPMDVVKTRLMTQ----------------------------SACSA------------------------------------VRYRGVAHALSAVAASEGVSAFAKGIAPRIAAKTLQSALFFAAYERVKGTLARML 132
            +Y GL AQ+ARD+P+  VEF  YE L    R +A K+   +  S  L        L+GG+SGA+AALVSNPMDVVKTRLMTQ                            SA SA                                     RY GV H    +  +EG  AFAKGI PRIA KTLQSALFFA +E    TL R L
Sbjct:  251 LYTGLSAQIARDIPFVMVEFAAYETLSELVRKRASKKGDDKTLSDKLMRKGGVKLLIGGISGALAALVSNPMDVVKTRLMTQGPMLTVHASGGVGATPALPPHLVQSTMQSAASARAAAYKSVSSLVQPVKERVMSSAVPLRGQIPEVISMTRYNGVWHCFRTILRTEGPMAFAKGIVPRIAQKTLQSALFFAVFEFYSATLTRAL 456          
BLAST of Gcaud9730.t2 vs. uniprot
Match: R7QHI5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHI5_CHOCR)

HSP 1 Score: 90.9 bits (224), Expect = 4.640e-20
Identity = 51/127 (40.16%), Postives = 78/127 (61.42%), Query Frame = 0
Query:    2 YAGLGAQLARDVPYAAVEFVLYENLKARLKADKRMAKRARSHSLLVGGVSGAVAALVSNPMDVVKTRLMTQSACSAVRYRGVAHALSAVAASEGVSAFAKGIAPRIAAKTLQSALFFAAYERVKGTL 128
            ++G G+ + R++P+ A++F LYE LK        + +     + + G ++G V+A V+ P+DVVKTRLMTQSA  AV+YRG+ H L  +A  EG +A   G+ PR+   ++  A+FF AYE  K  L
Sbjct:   22 FSGYGSLVLRELPFDAMQFPLYEFLKKTWAERTGVEQLETWQTSVCGSMAGGVSAAVTTPLDVVKTRLMTQSA-GAVKYRGIVHGLRTIAREEGGAALFSGLTPRVMWISIGGAVFFGAYEAAKKVL 147          
BLAST of Gcaud9730.t2 vs. uniprot
Match: UPI000C1D680B (probable S-adenosylmethionine carrier 2, chloroplastic isoform X3 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D680B)

HSP 1 Score: 92.0 bits (227), Expect = 1.610e-19
Identity = 50/132 (37.88%), Postives = 82/132 (62.12%), Query Frame = 0
Query:    1 MYAGLGAQLARDVPYAAVEFVLYENLKA--RLKADKRMAKRARSHSLLVGGVSGAVAALVSNPMDVVKTRLMTQSACSAVRYRGVAHALSAVAASEGVSAFAKGIAPRIAAKTLQSALFFAAYERVKGTLAR 130
            +YAG G+ L RD+P+ A++F +YE L+   RL A + ++      + ++G  +GA+   ++ P+DV+KTRLM Q   SA++Y+G+ H +S +A  EG S F KG+ PR+    +  ++FF   ER K  LA+
Sbjct:  134 LYAGYGSFLLRDLPFDAIQFCIYEQLRIGYRLSARRDLSD---PENAMIGAFAGAITGAITTPLDVIKTRLMVQG--SAMQYKGILHCVSTIAREEGSSVFFKGMGPRVLWIGIGGSIFFGVLERTKLLLAQ 260          
BLAST of Gcaud9730.t2 vs. uniprot
Match: A0A2V3IGN9_9FLOR (Putative S-adenosylmethionine carrier 2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGN9_9FLOR)

HSP 1 Score: 92.4 bits (228), Expect = 1.910e-19
Identity = 49/127 (38.58%), Postives = 77/127 (60.63%), Query Frame = 0
Query:    2 YAGLGAQLARDVPYAAVEFVLYENLKARLKADKRMAKRARSHSLLVGGVSGAVAALVSNPMDVVKTRLMTQSACSAVRYRGVAHALSAVAASEGVSAFAKGIAPRIAAKTLQSALFFAAYERVKGTL 128
            Y G G+ + R++P+ A++F LYE LK      KR  +     + + G ++GA++A ++ P+DVVKTRLMTQ+  +A +Y G+ H +S +A  EG  A   G+ PR+   +L  A+FF A+E  K  L
Sbjct:  161 YTGYGSLVLRELPFDAIQFPLYEYLKTVAMRRKRGGQLETWETSVCGSIAGAISAALTTPLDVVKTRLMTQNV-AAPKYNGIVHGISTIAREEGAKALMAGVIPRVMWISLGGAVFFGAFEAAKKVL 286          
BLAST of Gcaud9730.t2 vs. uniprot
Match: A0A2K1J3B1_PHYPA (Uncharacterized protein n=6 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1J3B1_PHYPA)

HSP 1 Score: 93.2 bits (230), Expect = 2.080e-19
Identity = 50/130 (38.46%), Postives = 78/130 (60.00%), Query Frame = 0
Query:    2 YAGLGAQLARDVPYAAVEFVLYENLKAR------LKADKRMAKRARSHSLLVGGVSGAVAALVSNPMDVVKTRLMTQSACSAVRYRGVAHALSAVAASEGVSAFAKGIAPRIAAKTLQSALFFAAYERVK 125
            Y G   Q+ARD+PY+A++F+ +E LK R      L  D++ +KR   H L +G ++GAVA  ++ P+DV KTR+MTQ+    + Y G+   L  +   EG++ F +G+ PR+  K   SA+F   YE +K
Sbjct:  213 YCGYSMQVARDIPYSALQFMTFEYLKKRYSHRENLHMDQKNSKRL-VHDLCIGALAGAVACTLTTPLDVAKTRVMTQNPSDPLVYMGLQATLQKIWLEEGIAGFGRGMVPRVLYKVPASAVFLVCYEAIK 341          
BLAST of Gcaud9730.t2 vs. uniprot
Match: UPI000C1D8317 (S-adenosylmethionine carrier 1, chloroplastic/mitochondrial-like isoform X1 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D8317)

HSP 1 Score: 92.0 bits (227), Expect = 3.010e-19
Identity = 50/132 (37.88%), Postives = 82/132 (62.12%), Query Frame = 0
Query:    1 MYAGLGAQLARDVPYAAVEFVLYENLKA--RLKADKRMAKRARSHSLLVGGVSGAVAALVSNPMDVVKTRLMTQSACSAVRYRGVAHALSAVAASEGVSAFAKGIAPRIAAKTLQSALFFAAYERVKGTLAR 130
            +YAG G+ L RD+P+ A++F +YE L+   RL A + ++      + ++G  +GA+   ++ P+DV+KTRLM Q   SA++Y+G+ H +S +A  EG S F KG+ PR+    +  ++FF   ER K  LA+
Sbjct:  176 LYAGYGSFLLRDLPFDAIQFCIYEQLRIGYRLSARRDLSD---PENAMIGAFAGAITGAITTPLDVIKTRLMVQG--SAMQYKGILHCVSTIAREEGSSVFFKGMGPRVLWIGIGGSIFFGVLERTKLLLAQ 302          
BLAST of Gcaud9730.t2 vs. uniprot
Match: A0A1Y1HXA0_KLENI (Mitochondrial substrate carrier family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HXA0_KLENI)

HSP 1 Score: 90.9 bits (224), Expect = 1.730e-18
Identity = 55/138 (39.86%), Postives = 75/138 (54.35%), Query Frame = 0
Query:    2 YAGLGAQLARDVPYAAVEFVLYENLKARLKADKRMAKRARSH-----------SLLVGGVSGAVAALVSNPMDVVKTRLMTQSACSAVRYRGVAHALSAVAASEGVSAFAKGIAPRIAAKTLQSALFFAAYERVKGTL 128
            Y G G QLARD+PYAA++F+ +E LK     ++     A              +L +G V+G VA++V+NPMDVVKTR+MTQ         GV   + ++   EG  AF  G+ PR+  K   SALF  AYE +K  L
Sbjct:  147 YTGYGIQLARDIPYAAIQFMTFETLKKAYGVNRPQEAGAPKRPVTSEAKKVLTNLWMGAVAGLVASVVTNPMDVVKTRVMTQDLTQGAVKIGVRQTVRSILKHEGPLAFTYGMLPRVMLKVPASALFLVAYEGIKRLL 284          
BLAST of Gcaud9730.t2 vs. uniprot
Match: A0A1X6NJF7_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJF7_PORUM)

HSP 1 Score: 90.1 bits (222), Expect = 1.950e-18
Identity = 56/133 (42.11%), Postives = 75/133 (56.39%), Query Frame = 0
Query:    2 YAGLGAQLARDVPYAAVEFVLYENLKARLKADKRMAKRARSHSLLV------GGVSGAVAALVSNPMDVVKTRLMTQSACSAVRYRGVAHALSAVAASEGVSAFAKGIAPRIAAKTLQSALFFAAYERVKGTL 128
            YAG G+ + R++P+ A++F LYE LK R  A +  A       L        G  +GAV+A V+ P+DVVKTR+MTQ A   V Y+GV   LS +A  EG +A A G+ PR+    L  A+FF  YE  K  L
Sbjct:  183 YAGYGSLVLRELPFDALQFPLYEALKTRWAASRARAGYPNEGRLQTWQTSACGSAAGAVSAAVTTPLDVVKTRMMTQKA-GTVPYKGVVDGLSRIAREEGAAALAAGMLPRVVWIALGGAIFFGGYEVTKAHL 314          
The following BLAST results are available for this feature:
BLAST of Gcaud9730.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J081_9FLOR7.320e-6583.58S-adenosylmethionine carrier 1, chloroplastic/mito... [more]
A0A7S1XCF3_9RHOD5.160e-3250.71Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YT10_PORPP2.030e-2338.83S-adenosylmethionine carrier 1, chloroplastic/mito... [more]
R7QHI5_CHOCR4.640e-2040.16Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
UPI000C1D680B1.610e-1937.88probable S-adenosylmethionine carrier 2, chloropla... [more]
A0A2V3IGN9_9FLOR1.910e-1938.58Putative S-adenosylmethionine carrier 2, chloropla... [more]
A0A2K1J3B1_PHYPA2.080e-1938.46Uncharacterized protein n=6 Tax=Physcomitrium pate... [more]
UPI000C1D83173.010e-1937.88S-adenosylmethionine carrier 1, chloroplastic/mito... [more]
A0A1Y1HXA0_KLENI1.730e-1839.86Mitochondrial substrate carrier family protein n=1... [more]
A0A1X6NJF7_PORUM1.950e-1842.11Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 23..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..166
NoneNo IPR availablePANTHERPTHR45667S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEINcoord: 1..129
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 63..166
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10Mitochondrial carrier domaincoord: 1..149
e-value: 2.0E-33
score: 117.4
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 1..123
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 43..129
e-value: 2.5E-21
score: 75.4
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 1..29
score: 9.104823
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 43..127
score: 23.82165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_4239_length_2436_cov_3.763753contigNODE_4239_length_2436_cov_3.763753:765..1265 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9730.t2Gcaud9730.t2Gracilaria caudata M_176_S67 malemRNANODE_4239_length_2436_cov_3.763753 765..1265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9730.t2 ID=Gcaud9730.t2|Name=Gcaud9730.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=167bp
MYAGLGAQLARDVPYAAVEFVLYENLKARLKADKRMAKRARSHSLLVGGV
SGAVAALVSNPMDVVKTRLMTQSACSAVRYRGVAHALSAVAASEGVSAFA
KGIAPRIAAKTLQSALFFAAYERVKGTLARMLGVARSGGGSGGGGGGGGG
GGNYDDDDDGDGDSAM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom_sf
IPR018108Mitochondrial_sb/sol_carrier