Gcaud9723.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud9723.t1
Unique Name	Gcaud9723.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	426

Homology

[Close]

BLAST of Gcaud9723.t1 vs. uniprot
Match: A0A2V3IVA7_9FLOR (N-lysine methyltransferase SETD6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVA7_9FLOR)

HSP 1 Score: 290 bits (742), Expect = 4.360e-88
Identity = 159/389 (40.87%), Postives = 228/389 (58.61%), Query Frame = 0

Query:    3 DQKLASSLANIYDGVLLHNPLSISLWQLQHNIRVCQKECGYYLPIDILQCFTTGCKPSANARTAPISDEQCEHKLLLHVGYLLTRFANEHCTDWRTQGALFMEKGRVDEHVLELLAADFPPWFRRLPIVTVLFFFVFVFGAQLYVSSQMKQRQKGLAEVLRMCEHKQLWQHVMQSVKQFFSERTAFMQPFVDHGVDSDLQASEQLLNDLNNILPLSCALNEQFSAQLSEAWRVECDDMHVTTCKLKRFDTRDWKWLLFEAPLHDWIHALRRLYRQRNDDAHTLITTYQLCHAASAKKLKGGMEWHGYVDHNGVNMLRPVRLQSDLLLIWTSLIALTQPFCAATRAHARSELCAPLRAHLGGVMDGALLLATAFHDCGARFIDGAHHMWR 391
            D  +   LA IYD  L    L+IS + L+  ++ CQ+E GY++P+DILQCFTTGCKP  +        +Q E+++LLHVGY+LTR +     +W   G  F ++      V++L+    P WF +LP++++L FF +V  AQ  V+  ++     +   LR  + K LW+ V +SV +F   R A  +     G   DL+ S  LL+DLN +LP S  LN+     + EAWRVE  D+  + C LK F+ R+WKWLLFE     WI ALRRL   R DD HTL+T+ ++C+A    K KGG+EWHG+ D+  V +LRPVRLQSD++ IW +L A ++P    +    R++    L A +  V++  LL+A  F D G RFIDGA  +WR
Sbjct:   11 DACIQKELAGIYDRTLSDRLLAISTFDLKKKLQTCQRESGYHMPLDILQCFTTGCKPRDSC------VDQSENRMLLHVGYVLTRLSGSQRGEWLNAGMRFADEMDSSADVMDLVDEHLPMWFAKLPVISLLTFFAYVCAAQQLVNRNVRGENVHVNSFLRQADEKDLWKDVRESVYKFVKARIAQCE-----GDVRDLEESLALLDDLNKMLPFSVVLNDVARMGVKEAWRVESHDLDGSNC-LKCFERREWKWLLFEVRHDRWIDALRRLSDSRCDDVHTLVTSTEVCNAIGRHKAKGGLEWHGFRDNETV-LLRPVRLQSDVMRIWEALYACSKPIVGRSGGGGRNDA---LMAGVEAVVEQLLLMAALFADGGERFIDGARALWR 383

The following BLAST results are available for this feature:

BLAST of Gcaud9723.t1 vs. uniprot

BLAST of Gcaud9723.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IVA7_9FLOR	4.360e-88	40.87	N-lysine methyltransferase SETD6 n=1 Tax=Gracilari...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 148..425
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 128..147
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..127
None	No IPR available	TMHMM	TMhelix		coord: 128..147

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_4568_length_2164_cov_3.670526	contig	NODE_4568_length_2164_cov_3.670526:546..1823 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud9723.t1	Gcaud9723.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_4568_length_2164_cov_3.670526 546..1823 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud9723.t1 ID=Gcaud9723.t1|Name=Gcaud9723.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=426bp
MCDQKLASSLANIYDGVLLHNPLSISLWQLQHNIRVCQKECGYYLPIDIL
QCFTTGCKPSANARTAPISDEQCEHKLLLHVGYLLTRFANEHCTDWRTQG
ALFMEKGRVDEHVLELLAADFPPWFRRLPIVTVLFFFVFVFGAQLYVSSQ
MKQRQKGLAEVLRMCEHKQLWQHVMQSVKQFFSERTAFMQPFVDHGVDSD
LQASEQLLNDLNNILPLSCALNEQFSAQLSEAWRVECDDMHVTTCKLKRF
DTRDWKWLLFEAPLHDWIHALRRLYRQRNDDAHTLITTYQLCHAASAKKL
KGGMEWHGYVDHNGVNMLRPVRLQSDLLLIWTSLIALTQPFCAATRAHAR
SELCAPLRAHLGGVMDGALLLATAFHDCGARFIDGAHHMWRHSAHASACK
RRDCASCAAAAPGSPASGVSELGHA*