Gcaud9710.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9710.t1
Unique NameGcaud9710.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length674
Homology
BLAST of Gcaud9710.t1 vs. uniprot
Match: A0A2V3IFF1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFF1_9FLOR)

HSP 1 Score: 619 bits (1597), Expect = 2.370e-211
Identity = 348/722 (48.20%), Postives = 449/722 (62.19%), Query Frame = 0
Query:    5 MLYSDHVVFHVGAQKSRDSRPNSAYRRMDFFSSSNSTALLHMVNPYIRRAKNSFRRLKFSSRFALFPIALSILIAFLVSSNTLSPSLTIETHYNPGSDDAARH------TDWEIKVSDFGMSGERAAQDSKTMYARMRNH-----------------ELRTLGSP---------------------------------------------HPAVSQTANSIP------FTDSKNRNLDQSLGKQFKNLVHHDHDADHQTHGSARIP-NKENMVISSTASKLDIEKNKTNGVLSSTLRNRHHKTGHSNISHKHHR---FQFNETTFSELPDTKLLIDKEFAAFKPLRSRTTDVRLTSLQNVCYCTQRNKFLLPRLSKDKKTKFPGYLYRYGAALSVSWKRRTHILANPEQKVVHVDGTTIIWRGRSIHTYTNHLQRSLIPIRSLLDTLKRTKYNINVRIAAESFTPSAGQDAVVRKAHDYFLGDVSEENRIELARLRPRLLCFERALALGSEYEGHSKSAESYEAVKGLIEKHETSYLKGKLVRTCKDAGSTKSTIWILERQEQHTHTGTVSNSAEVREAVRHELVKAHLDDKVNIQFIQSPSLPCPKGTKRAGCFDSICSRDEDVRSGRGNH----NCRHHPAILPEVLAFNRMTFLITVTGRANDAVIYMPRGSQVIEIVPHGILDHSFEDLAKDARLKHHRLENRPFKGTELLMFDRFGD 644
            MLYSDHV +HVG  ++ D++  +A  R   F +S S A L+MVNPY+RRAKNS +RL+ S+R AL PI LSI IAFL+S+   +P+     +Y+  S  A+ H      T+ + +  D    G+    D++ +  R   H                 ++ + GSP                                             HP  S     +P      +   ++R L   L    KN  +H   + HQ   S     + +N V  +T    +  K+++N     T    +    H N  H  H+   F+ NETTF ELP T+LL++KEF  FKPL  R TDVR+ +L++VCYCT+RNKFL+PR SKDKKTKFPGYLYRYGAALSVSW RR  ILA+P+QKVVH  GTTI+WRGRSIHTY  HL RSLIPIRSLLD L++T Y+I+V++AAESFTP   Q+ VVRKAH+YFLGDV E+NRIEL R+RPRLLCFE AL+ G+EYEGH+ S ESY+ +KGLIEKHE S  K +L R CKDA  +K TIWI+ERQ  H H GT+SN+  V+EAV HEL KA L   V+IQFIQ+PS+PCP GT RAGC+ SIC    D R+G+ N+     CR HP ILPEVL +NRMTFLIT++G AN+ V+YMPRGS ++E+ P+G+L +S E LAKDA L H+R+ENR F+ TE  +FD+FGD
Sbjct:    1 MLYSDHVAYHVGVHRAADTQLEAALSREGVFLTSQSKAFLYMVNPYLRRAKNSLQRLRLSNRSALIPIFLSIGIAFLLSARARAPTPKPADYYHTAS--ASTHIGEHYDTNGQDEPLDNVYGGQWELYDTEKLSQRDNGHKSISTPPDMKQNSHSGSDIHSFGSPPSNHVYRQSGHQESGHSAVPEHDKHRAKHPTYDRLVREVAGHLRVHPTHSSLHRRVPHNAKYGYKTVEDRALSLGLADNLKNPPNHL--SSHQYFASTENQKDTQNGVTHNTHHDHNKPKHRSNP----TSHTPNAPNAHGNKQHSIHKSPHFKINETTFKELPQTELLLEKEFLLFKPLNYRRTDVRVIALKHVCYCTRRNKFLVPRFSKDKKTKFPGYLYRYGAALSVSWNRRKSILASPDQKVVHFSGTTILWRGRSIHTYNQHLHRSLIPIRSLLDVLRKTNYSIDVKVAAESFTPPTEQETVVRKAHEYFLGDVPEQNRIELGRIRPRLLCFENALSFGAEYEGHAASVESYDNIKGLIEKHERSTSKMELTRKCKDASGSKKTIWIMERQHVHGHEGTMSNAPAVKEAVEHELKKAGLASAVDIQFIQAPSIPCPHGTSRAGCYGSIC----DKRNGKWNNAESQRCRRHPEILPEVLTYNRMTFLITLSGSANEGVVYMPRGSHILEVAPYGVLGNSLERLAKDAHLSHYRMENRAFRDTETHIFDQFGD 710          
The following BLAST results are available for this feature:
BLAST of Gcaud9710.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IFF1_9FLOR2.370e-21148.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..82
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 83..673
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..62
NoneNo IPR availableTMHMMTMhelixcoord: 63..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_743_length_18853_cov_4.482944contigNODE_743_length_18853_cov_4.482944:5344..7474 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9710.t1Gcaud9710.t1Gracilaria caudata M_176_S67 malemRNANODE_743_length_18853_cov_4.482944 5344..7474 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9710.t1 ID=Gcaud9710.t1|Name=Gcaud9710.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=674bp
MISRMLYSDHVVFHVGAQKSRDSRPNSAYRRMDFFSSSNSTALLHMVNPY
IRRAKNSFRRLKFSSRFALFPIALSILIAFLVSSNTLSPSLTIETHYNPG
SDDAARHTDWEIKVSDFGMSGERAAQDSKTMYARMRNHELRTLGSPHPAV
SQTANSIPFTDSKNRNLDQSLGKQFKNLVHHDHDADHQTHGSARIPNKEN
MVISSTASKLDIEKNKTNGVLSSTLRNRHHKTGHSNISHKHHRFQFNETT
FSELPDTKLLIDKEFAAFKPLRSRTTDVRLTSLQNVCYCTQRNKFLLPRL
SKDKKTKFPGYLYRYGAALSVSWKRRTHILANPEQKVVHVDGTTIIWRGR
SIHTYTNHLQRSLIPIRSLLDTLKRTKYNINVRIAAESFTPSAGQDAVVR
KAHDYFLGDVSEENRIELARLRPRLLCFERALALGSEYEGHSKSAESYEA
VKGLIEKHETSYLKGKLVRTCKDAGSTKSTIWILERQEQHTHTGTVSNSA
EVREAVRHELVKAHLDDKVNIQFIQSPSLPCPKGTKRAGCFDSICSRDED
VRSGRGNHNCRHHPAILPEVLAFNRMTFLITVTGRANDAVIYMPRGSQVI
EIVPHGILDHSFEDLAKDARLKHHRLENRPFKGTELLMFDRFGDHLEIGK
ELAKFENGRGLLRFTSSAPRLQE*
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