Gcaud9699.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9699.t1
Unique NameGcaud9699.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1477
Homology
BLAST of Gcaud9699.t1 vs. uniprot
Match: R7QA78_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA78_CHOCR)

HSP 1 Score: 128 bits (321), Expect = 5.190e-26
Identity = 151/529 (28.54%), Postives = 223/529 (42.16%), Query Frame = 0
Query:  526 RRKAYAERSDYDGPTENETRGEWLDRRRKKAETRDAVRSVIELIINRAVYGDRRRGRRVYSRKAGPNSSQGSRVKREASKRDSSADVGNSTPPLNLKVPNSTRQENGTRQPTTVSLESTSNQGHVSTSGKVSHLHRDEETQEFHHAENPLISRPQQPL---PLREETLRQVPQRRVAPPPLRPAPWAPKA-NDAKRQQNVISPVTAQIRAEAAQXXXXXXXXXXXXXXLSGDSLGVHIAPSSSSKSTEVLGTNSHPERSNQSEHARKGSDIALMSVKRTISRESLPSGLEHPYVPSSVNRLATSSAYKDDSVTIPPTLGGNVKVLMKPSTRRDPGKEGQG--YVLAQNGNVAHTVHDSNQNMRSDFERSRGVARRGRGGKSEFARRSRREFSSESDEFAVNIDKRSGPAEVNRKQTRGSTEERVQQKPFEEDDGEESRAWAKGSRTSPPTSFDEITRAFLNQPAAFPLVGAPLLPSVPVVPVLRSCPPSGPSTSYGDVSNAWSENKQWTPSERHTEHVPAHWWKAASTS 1048
            RR  Y  R +YDGP  NE+R +WL+RRR++ E R+ V+S++++ ++RAVYG +   +R Y R+    S+Q  R K + ++   +   G+ TP                                 S  GK S        +   ++ +   SRPQQ     PL            VAP PLRPAPWAPKA   +   +NV    T  +  +A++                 +   +  +  SS         +S P R  Q   +R G+     S  R I    +P         S  +R       + DSVTIP   GG ++V+ +P   R   ++G G   VL+   N+      +  N    F++ R   RR RGGK +  RR RR    +SD+           A  + +  RG     +       D  +ES AWA  +    P SFD ITRAF NQPA FPLVGAPLLP       + +      ST+      AW+ +  WT +++    V   WW++ S +
Sbjct:  150 RRHPYRAR-EYDGPAANESREQWLERRRRETEIRNVVKSILQMCVHRAVYGIKPGPKRPYGRRGSSQSAQHPRRK-DYNRPRWTGSPGSKTP--------------------------------ESAPGKPSAPAPAASPEVRRNSASKPQSRPQQAALAKPLPAXXXXXXXXXXVAPAPLRPAPWAPKAPGSSPETKNVHGSRTEGLPVDASKI----------------EDWSMRQSQVSSPSLDPTPMQSSVPSR--QQPRSRSGAGHVPPSAVRNI----IPVKASQSSKASGADR-----QLEVDSVTIPAPSGG-IRVVQRPDRGRGANRQGPGGSAVLSNGKNLLSGAAVTPAN--GPFDKPRYAPRR-RGGKLDVPRRDRRAPYRKSDD-----------ARASGEDQRGGYGVPLTSHSIPLDAKQESEAWAANNGPKQPASFDAITRAFSNQPAPFPLVGAPLLPLXXXXXXISTPDEGSASTANDSNRGAWNASGTWTGTQKE---VKTDWWQSKSNN 599          
The following BLAST results are available for this feature:
BLAST of Gcaud9699.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QA78_CHOCR5.190e-2628.54Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 248..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1079..1101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 476..496
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1273..1296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..547
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 497..547
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1052..1070
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 609..654
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 733..798
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 738..779
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1416..1464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 418..459
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 655..671
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1306..1324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1325..1352
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1029..1476
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 582..718
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..401
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1353..1378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 875..968
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 879..959
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1141..1162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1190..1204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_82_length_55453_cov_4.345977contigNODE_82_length_55453_cov_4.345977:27707..32223 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9699.t1Gcaud9699.t1Gracilaria caudata M_176_S67 malemRNANODE_82_length_55453_cov_4.345977 27707..32223 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9699.t1 ID=Gcaud9699.t1|Name=Gcaud9699.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1477bp
MKRQSYLGPTRRFPKAPLPFNLPSLRREAGGDGAGGGIAGAGAKWASPRA
DAIEEAREEEKHDERSSGSKTAWGGAGLRVRTQPDFPELSRPSLPPLGNA
TKSTKKTEEAKAGKDSDDRPEPVLAKPSTSPTTASAKPVVEEDDWAEDDN
GMDFTAEVSLPEVNIPDVPPPPPRTTPSLPHSPVPVTPRIIPGHGPQRRN
VVPPPAAHWAHAIKLQQMERLSDSRGRPTARMRENELPPGSASVGIDLKL
LEEQKNIMKTKAEMAQEARRKAEAERERIQKERAAKKLRELEERLRLKEE
RRRADEQADSGRLGSRCADPAVSRRTPVHITPPSDLSGKAERRDTGSRPR
NASPVPEHQSSRPVVLQRSREETEQPVSTGTSSFVSPVQGRGSSGGVFST
EEGDGQASLKASDVKDSLSAAPSFQDSASDRTPARTSPPSTSVPTQHSSR
RNYRSTVASRASAEAPGANAFPASSPAGRLRSSSRSLETTSNGYERRRSS
PSRRERAHRYSPQDSRVHEYNSYGRRRKAYAERSDYDGPTENETRGEWLD
RRRKKAETRDAVRSVIELIINRAVYGDRRRGRRVYSRKAGPNSSQGSRVK
REASKRDSSADVGNSTPPLNLKVPNSTRQENGTRQPTTVSLESTSNQGHV
STSGKVSHLHRDEETQEFHHAENPLISRPQQPLPLREETLRQVPQRRVAP
PPLRPAPWAPKANDAKRQQNVISPVTAQIRAEAAQQAAKATKTGSRTGQL
SGDSLGVHIAPSSSSKSTEVLGTNSHPERSNQSEHARKGSDIALMSVKRT
ISRESLPSGLEHPYVPSSVNRLATSSAYKDDSVTIPPTLGGNVKVLMKPS
TRRDPGKEGQGYVLAQNGNVAHTVHDSNQNMRSDFERSRGVARRGRGGKS
EFARRSRREFSSESDEFAVNIDKRSGPAEVNRKQTRGSTEERVQQKPFEE
DDGEESRAWAKGSRTSPPTSFDEITRAFLNQPAAFPLVGAPLLPSVPVVP
VLRSCPPSGPSTSYGDVSNAWSENKQWTPSERHTEHVPAHWWKAASTSPD
EDVSTENRDPTYREMVPPTDRPESFDAVGKSQDTDNITTKNGPSSLIRTE
KHGNSLRSRSRKAYRHSRKSKRGILGSTEKILQGSSEDLQSGNHDTDKDM
LNVAKPDVVEHDKMSSTPLMGKHSSVSGEIELVVGPVGSSKTSEIVTTTQ
LESAVEKRSGKEQRALLNAEGETSQDGVNEKRQTKKPTRSESGGAALSRK
AQDPLINARKPRKSGSRGRRQHQGGLSKRETSKSEEEDRKSVNIKLVSDS
RDSYVGANGNRDDLHSKDRQQNEVQEKSTTQTSKPNSAGVISISSTSGAT
ECRNDGDGHHVGKTTDARIDDSSTAFRKPHRNAKNNTHARRSMDRTAPVK
DSNEIYFIDTNNLKEDGAASKGSQVTSNVTTASSSNVESATNESSSNHLS
NEPEKSTSGAALSFRGRTWKQLPTEI*
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