Gcaud9690.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud9690.t2
Unique Name	Gcaud9690.t2
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	209

Homology

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BLAST of Gcaud9690.t2 vs. uniprot
Match: A0A2V3J0U8_9FLOR (Telomere repeat-binding factor 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0U8_9FLOR)

HSP 1 Score: 83.6 bits (205), Expect = 4.400e-15
Identity = 74/204 (36.27%), Postives = 97/204 (47.55%), Query Frame = 0

Query:   13 GVRRSSPLSQPSNPALRLHGSNEEPS---LEVHNRSSYDGQNVPVNTSSSDSSREIIPLVNPANTFKVKRIKASAQRLEMVLNSHGAA---ERELQASLRSGHGLPIGNDKSMMQNKDSEIHQGCYEGNSITGEERHRVEAVASVANLLNPTSFDSGSQGKAYSRRQG-----RDGTDVGSHGLPGQEEPYGGGELLVKRSRTG 205
            G  RS    Q S+   RL G     +    EV    S   +++  N S SD+SREIIPLVNPA+TF+V RIK+S    +   N    A   ++ L  S+ SG G  IG      + +    HQ   +      E RHRVE VASVANLLNP   D  +   A+ R        R  T+ GS  +    +  G  E  VKR++TG
Sbjct:  982 GSARSYGFIQRSHRDSRLFGRVHNAAGDMAEVSEELSPHSRDLSGNASGSDTSREIIPLVNPASTFQVTRIKSSVPGRDKPSNGSCYAFDRDQALGHSIYSGVG--IGRVSDATEGRGVGGHQRYGDEGKEESEGRHRVEDVASVANLLNPDCLDQSTYANAHKRSHAMGVRRRGETEEGSRRM----DVIGRDEGPVKRAKTG 1179

The following BLAST results are available for this feature:

BLAST of Gcaud9690.t2 vs. uniprot

BLAST of Gcaud9690.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J0U8_9FLOR	4.400e-15	36.27	Telomere repeat-binding factor 5 n=1 Tax=Gracilari...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..59

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_82_length_55453_cov_4.345977	contig	NODE_82_length_55453_cov_4.345977:7429..8055 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud9690.t2	Gcaud9690.t2	Gracilaria caudata M_176_S67 male	mRNA	NODE_82_length_55453_cov_4.345977 7429..8055 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud9690.t2 ID=Gcaud9690.t2|Name=Gcaud9690.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=209bp
MLDTGAFANCGDGVRRSSPLSQPSNPALRLHGSNEEPSLEVHNRSSYDGQ
NVPVNTSSSDSSREIIPLVNPANTFKVKRIKASAQRLEMVLNSHGAAERE
LQASLRSGHGLPIGNDKSMMQNKDSEIHQGCYEGNSITGEERHRVEAVAS
VANLLNPTSFDSGSQGKAYSRRQGRDGTDVGSHGLPGQEEPYGGGELLVK
RSRTGLEQ*