Gcaud9681.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9681.t1
Unique NameGcaud9681.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length651
Homology
BLAST of Gcaud9681.t1 vs. uniprot
Match: A0A2V3J5V7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5V7_9FLOR)

HSP 1 Score: 743 bits (1918), Expect = 5.250e-262
Identity = 363/628 (57.80%), Postives = 473/628 (75.32%), Query Frame = 0
Query:    1 MKIAVVGGNLLGCATALDLALVAEHDRHE-LHSERAFDVSVLERRATLGGSSLRAVRVDDELEVQVGAYATLPVLHGTFLNDLLEAANDARGTLPFFNRRVALPGATAMRRGRVRAAVVNSAWARGSYGALVRSYALWDWRDDKYLLMHTGWWLLDVLYRLLNNNLWRSVAFAMLLYSAQQLMTRVVGRLNRAYVMVQCVLFLMLTVLSPKRVVHMWQRNYSFWGTTAPLLFSYGITPAIARGSVEGFVKLLAKMNVRNVATCSISVGTLVQRAGLDSYLRSTALDYTEQFQYKPQYVARHIAPTVMREYAGARMKRLNALALQFSMLQCDAMNSDASERLCTIAPNNGALCDALIEAARATMPLRLSLNTTVTAIVYCEQDNQYDVSYADGGSERFDGVVLCASPKEGEMTIDTPVGNSLSELLGYARDDASAQQAAHEQALHDASQSADAAXXXXXXXXXXXXXXXXEQVVPARACSHVAVVVGVAQASFFRFAREKHIPDCIDVMHAPAFSRFERVREVRADKAGVYKITCGEHFESSGVLAEMFEPGARLEYFAPLAPNVYSTSVLPREKHVDDCMPYIVLGTHFVYGKALRALAKHAEMDAIAAVNSASLFSKAVQWGSEDDK 627
            M+IAV+GGNLLGCAT LDLALV E D      S   F+V++LE +  LGG+SLR++ ++DE  V+VGAY TLP+L GT+LNDL++  ND R T+  FN+R++LPG+T  RRG   AA ++  W+ G+ G+LVRSYA+WDW++D+Y L H+GW LLD+L+R LNNN+WRS+  A L+YS +QL T V GR+NRA ++ QC+ FL+LTVLSP+R+V MWQ NYSFWGTTAPLL  YGITPAI RGS  GFVK L+KMN RNVATCSISVGTLV+RA LDSYLRSTA+D+  QF+Y  +YV RHI P ++++  GA +  +NALALQFS+L  D +N+DA +RLCTI+P+N  LC AL++AA+ATMP+ + LNTTVTAI+Y E+ N+YD+++ADG SE F+GVVLC SP EG MTIDTPVG+SLS++LGY RD  +AQQ+A E+A H  +  A                   +  VP  AC+H+AV+ G  ++SFFRFA E+ IPD IDV+HAP F RFERVRE+  D+ GVY +     FESSG+  +MFE  A++ +F  +  N YST+ LPR  H+D+CMPY+VLGTHF+  KA R++AKH EMDAIAAVN+ASLFS+ +QWG+E+DK
Sbjct:    1 MRIAVIGGNLLGCATTLDLALVQELDNETPSDSTTVFEVTILETQPRLGGNSLRSIALEDESRVEVGAYRTLPILPGTYLNDLVQTVNDERATISIFNKRISLPGSTIARRGHAGAATIHRPWSTGTNGSLVRSYAIWDWQNDQYPLRHSGWPLLDLLHRFLNNNIWRSITLAALIYSIEQLRTVVHGRINRATMLAQCIAFLVLTVLSPQRLVAMWQHNYSFWGTTAPLLIKYGITPAIVRGSTTGFVKHLSKMNTRNVATCSISVGTLVRRAELDSYLRSTAMDFVNQFKYDHEYVHRHIEPVLVQQSLGADINHVNALALQFSLLDSDPVNNDARDRLCTISPDNATLCAALVDAAKATMPVHVKLNTTVTAIIYNERTNEYDITFADGASESFEGVVLCTSPVEGGMTIDTPVGSSLSDMLGYERDKQAAQQSAEEEAAHRTTSQA-----------GGDNITIQQPAVPPGACTHIAVIAGKPRSSFFRFADERRIPDTIDVLHAPKFCRFERVREISKDEGGVYAVLVAADFESSGLKEQMFEHNAKVLHFESVPSNPYSTTSLPRHAHIDNCMPYVVLGTHFINAKAFRSIAKHPEMDAIAAVNTASLFSRGIQWGTEEDK 617          
BLAST of Gcaud9681.t1 vs. uniprot
Match: A0A7S2ZDA5_9RHOD (Hypothetical protein n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZDA5_9RHOD)

HSP 1 Score: 154 bits (390), Expect = 2.120e-36
Identity = 161/656 (24.54%), Postives = 274/656 (41.77%), Query Frame = 0
Query:    1 MKIAVVGGNLLGCATA--LDLALVAEHDRHELHSE-------------RAFDVSVLERRATLGGSSLRAVRVDDELEVQVGAYATLPVLHGTFLNDLLEAANDARGTLPFFNRRVALPGATAMRRGRVRAAVVNSAWARGSYGALVRSYALWDWRDDKYLLMHTGWWLLDVLYRLLNNNLWRS---VAFAMLLYSAQQLMTRVVGRLNRAYVMVQCVLFLMLTVLSPKRVVHMWQRNYSFWGTTAPLLFSYGITPAIARGSVEGFVKLLAKMNVRNVATCSISVGTLVQRAGLDSYLRSTALDYTEQFQYKPQYVARHIAPTVMR-EYAGARM--KRLNALALQFSMLQCDAMNSDASERLCTIAPNNGALCDALIEAARATMPLRLSLNTTVTAIVYCEQDNQYDVSY-----ADGGSERFDGVVLCASPKEGEMTIDTPVGNSLSELLGYARDDASAQQAAHEQALHDASQSADAAXXXXXXXXXXXXXXXXEQVVPARACSHVAVVVGVAQASFFRFAREKHIPDCIDVMHAPAFSRFERVREVRADKAGVYKITCGEHFESS-GVLAEMFEPGARLEYFAPLAPNVYSTSVLPREKHVDDCMPYIVLGTHFVYGKALRALAKHAEMDAIAAVNSASLFSKAVQWGSEDDKAE 629
            M++A+VGGNL GCATA  L+ +       +EL +                F V++ E+ + LGG+ L+   ++D + V+ G  +TL    G ++ ++L+  +       F                          W  G+    VRS+A++D  + +YL  H G+W LD+L  + ++   R    V     LY  +  M+     L R   +   V   +  VL P+R +    R+ +FW +    L +YG T A++RG+ +GF      M   N  T SI++G L  R GL SY  + A      F++ P +V RH + T ++ +YA +++  K ++ LA      + D    D   ++  I   N  LC+AL   +R  +          +A         Y +SY     A+   E F+G+VL  SP   E+T +TP  ++  ++ GY ++  + Q                                      P      +A+V G              +PD I       + + E V E +  K  ++ + C E  ++  G++AE+F     ++      P  Y T         +D +P ++LGT F+    +  L+   E D I+A N+ASLFS  V W  E ++++
Sbjct:    1 MRVAIVGGNLTGCATAWFLEKSYADLRKEYELRARCQEDDSDVLPPPPENFKVTIFEKSSVLGGNKLQTEIIED-VAVEAGRNSTLHS-DGVYVGEVLDQMSSELELDRF--------------------------WLEGTGYHSVRSFAIYDADNSEYLFRHGGYWGLDILKVVASSIFTRFLLLVGCGFALYHGRFEMSG----LARLKTIAAAVFVFISLVLFPRRFLASVNRSLAFWSSAIVGLMTYGTTAALSRGASKGFTDHFKAMLKANATTKSITLGHLFNRCGLGSYSSTDAESAFRSFKFLPAFV-RHYSDTQLQVDYANSQLAAKDVSTLAAMLCQQRADVSEGD---KVLRIRGGNAKLCEALGRGSRQMLNAAAVKIKKRSAEEIESGKQAYILSYKIPAQAEPVEEEFNGIVLACSPNMEELTFETPGMDNSGDVFGYTKEILTTQ-------------------------------------TPRNRSRWLALVAGTLNHRCLGHLIADTVPDMILSTSGKDWLKIECVAESKKGK--IWSVICTEEPKAGEGLIAELFTNVREMKVRERSQPK-YKTREFINGVDGND-VPSLILGTRFINAAGMDRLSCDPETDIISAWNAASLFSVGVNWMEEKEESQ 579          
BLAST of Gcaud9681.t1 vs. uniprot
Match: A0A7S3E6H6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E6H6_9RHOD)

HSP 1 Score: 105 bits (263), Expect = 3.140e-21
Identity = 96/361 (26.59%), Postives = 162/361 (44.88%), Query Frame = 0
Query:    1 MKIAVVGGNLLGCATA--LDLALVAEHDRHELHSE-------------RAFDVSVLERRATLGGSSLRAVRVDDELEVQVGAYATLPVLHGTFLNDLLEAANDARGTLPFFNRRVALPGATAMRRGRVRAAVVNSAWARGSYGALVRSYALWDWRDDKYLLMHTGWWLLDVLYRLLNNNLWRS---VAFAMLLYSAQQLMTRVVGRLNRAYVMVQCVLFLMLTVLSPKRVVHMWQRNYSFWGTTAPLLFSYGITPAIARGSVEGFVKLLAKMNVRNVATCSISVGTLVQRAGLDSYLRSTALDYTEQFQYKPQYVARHIAPTVMR-EYAGARM--KRLNALALQFSMLQCDAMNSDASERL 340
            M++A+VGGNL GCATA  L+ +       +EL +                F V++ E+ + LGG+ L+   ++D + V+ G  +TL    G ++ ++L+  +       F                          W  G+    VRS+A++D  + +YL  H G+W LD+L  + ++   R    V     LY  +  M+     L R   +   V   +  VL P+R +    R+ +FW +    L +YG T A++RG+ +GF      M   N  T SI++G L  R GL SY  + A      F++ P +V RH + T ++ +YA +++  K ++ LA      + D    D   R+
Sbjct:    1 MRVAIVGGNLTGCATAWFLEKSYADLRKEYELRARCQEDDSDVLPPPPENFKVTIFEKSSVLGGNKLQTEIIED-VAVEAGRNSTLHS-DGVYVGEVLDQMSSELELDRF--------------------------WLEGTGYHSVRSFAIYDADNSEYLFRHGGYWGLDILKVVASSIFTRFLLLVGCGFALYHGRFEMSG----LARLKTIAAAVFVFISLVLFPRRFLASVNRSLAFWSSAIVGLMTYGTTAALSRGASKGFTDHFKAMLKANATTKSITLGHLFNRCGLGSYSSTDAESAFRSFKFLPAFV-RHYSDTQLQVDYANSQLAAKDVSTLAAMLCQQRADVSEGDKVLRI 328          
The following BLAST results are available for this feature:
BLAST of Gcaud9681.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J5V7_9FLOR5.250e-26257.80Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S2ZDA5_9RHOD2.120e-3624.54Hypothetical protein n=5 Tax=Rhodosorus marinus Ta... [more]
A0A7S3E6H6_9RHOD3.140e-2126.59Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 442..471
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 449..467
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 625..640
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 434..467
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 625..650
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 190..208
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..115
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 209..219
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..137
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 138..156
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 179..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 157..178
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 241..650
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 220..240
IPR010795Prenylcysteine lyasePFAMPF07156Prenylcys_lyasecoord: 221..412
e-value: 2.0E-5
score: 24.0
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 1..406

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_731_length_19008_cov_3.951948contigNODE_731_length_19008_cov_3.951948:16578..18530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9681.t1Gcaud9681.t1Gracilaria caudata M_176_S67 malemRNANODE_731_length_19008_cov_3.951948 16578..18530 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9681.t1 ID=Gcaud9681.t1|Name=Gcaud9681.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=651bp
MKIAVVGGNLLGCATALDLALVAEHDRHELHSERAFDVSVLERRATLGGS
SLRAVRVDDELEVQVGAYATLPVLHGTFLNDLLEAANDARGTLPFFNRRV
ALPGATAMRRGRVRAAVVNSAWARGSYGALVRSYALWDWRDDKYLLMHTG
WWLLDVLYRLLNNNLWRSVAFAMLLYSAQQLMTRVVGRLNRAYVMVQCVL
FLMLTVLSPKRVVHMWQRNYSFWGTTAPLLFSYGITPAIARGSVEGFVKL
LAKMNVRNVATCSISVGTLVQRAGLDSYLRSTALDYTEQFQYKPQYVARH
IAPTVMREYAGARMKRLNALALQFSMLQCDAMNSDASERLCTIAPNNGAL
CDALIEAARATMPLRLSLNTTVTAIVYCEQDNQYDVSYADGGSERFDGVV
LCASPKEGEMTIDTPVGNSLSELLGYARDDASAQQAAHEQALHDASQSAD
AADEQQEQQQQQQQQQQHEQVVPARACSHVAVVVGVAQASFFRFAREKHI
PDCIDVMHAPAFSRFERVREVRADKAGVYKITCGEHFESSGVLAEMFEPG
ARLEYFAPLAPNVYSTSVLPREKHVDDCMPYIVLGTHFVYGKALRALAKH
AEMDAIAAVNSASLFSKAVQWGSEDDKAEADAHAEQRGDAQLAERGSAQH
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010795Prenylcys_lyase
IPR036188FAD/NAD-bd_sf