Gcaud9680.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9680.t1
Unique NameGcaud9680.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length488
Homology
BLAST of Gcaud9680.t1 vs. uniprot
Match: A0A2V3IUE2_9FLOR (Testosterone 17-beta-dehydrogenase 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUE2_9FLOR)

HSP 1 Score: 202 bits (515), Expect = 3.350e-58
Identity = 95/194 (48.97%), Postives = 140/194 (72.16%), Query Frame = 0
Query:  292 VVAACEDIEIGLLVNNAGIEVHGSFFKDSIASHSKLIDLNCKALVSLSHAFGRKMIDRKKGGIILISSVVSSPLPYFATYSASKSFVTCFGRILREELRKYNVSTTVIEPGVIESDMSRTARKDVDFEKGGFSTMSAQQCVAESLTALAGGRIVYIPGVKNKVSMSVMRTIPADISMKMGNALIDQMMDPEIMK 485
            VV+ CE++EIGLL+NNAG++ HGSFF+D +A H  ++ LN  A+V+L+HAFG KM+ RKKGGII+ SS+ S+P+P+ ATY ASKSF + FGR +REEL +Y V  TV+EP ++ S+MS   +K VD   G F     ++CV+E+L A   GR   IPG++N++ + VMR++P  + M++ NA +++ MD E+ K
Sbjct:   80 VVSECENLEIGLLINNAGMQTHGSFFRDPVAKHLDIVKLNSSAVVALTHAFGSKMVRRKKGGIIITSSISSTPIPWVATYCASKSFASTFGRSIREELLQYGVGLTVLEPAIVTSEMSAEVQKTVDMSSGAFPEQPVEECVSEALDAFMRGRPKIIPGLRNRLQVGVMRSLPEALQMRLLNADMERAMDEEVKK 273          
BLAST of Gcaud9680.t1 vs. uniprot
Match: A0A2V3IX20_9FLOR (Very-long-chain 3-oxoacyl-CoA reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX20_9FLOR)

HSP 1 Score: 191 bits (486), Expect = 8.210e-53
Identity = 96/180 (53.33%), Postives = 121/180 (67.22%), Query Frame = 0
Query:  290 RLVVAACEDIEIGLLVNNAGIEVHGSFFKDSIASHSKLIDLNCKALVSLSHAFGRKMIDRKKGGIILISSVVSSPLPYFATYSASKSFVTCFGRILREELRKYNVSTTVIEPGVIESDMSRTARKDVDFEKGGFSTMSAQQCVAESLTALAGG------------RIVYIPGVKNKVSMS 457
            R VV + +DIE+GLLVNNAGIE HGS F+D +  H  +IDLNCKALV+L+HAFGR+M+DRK+GGII  SS++S+P P+FATYSASKSFVT FGR +REE  +YNV  TV EPG++ESDMS+   K++DF K GFS      C         GG              V+  G K+ V +S
Sbjct:   78 RNVVESYDDIEVGLLVNNAGIETHGSLFRDPVEKHVNIIDLNCKALVALTHAFGRRMVDRKRGGIIFTSSLLSTPAPFFATYSASKSFVTSFGRAVREEFIRYNVQVTVSEPGIVESDMSKNIAKNMDFSKSGFSIQKPDDCTLSFQMFRGGGSKKSAAPEGVKTEFVFADGAKDDVQLS 257          
BLAST of Gcaud9680.t1 vs. uniprot
Match: R7QG19_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG19_CHOCR)

HSP 1 Score: 133 bits (334), Expect = 7.100e-32
Identity = 72/190 (37.89%), Postives = 112/190 (58.95%), Query Frame = 0
Query:  282 DWRANNFVRLVVAACEDIEIGLLVNNAGIEVHGSFFKDSIASHSKLIDLNCKALVSLSHAFGRKMIDRKKGGIILISSVVSSPLPYFATYSASKSFVTCFGRILREELRKYNVSTTVIEPGVIESDMSRTARKD-VDFEKGGFSTMSAQQCVAESLTALAGGRIVYIPGVKNKVSMSVMRTIPADISMKM 470
            D   ++ +R VV    D+++GLLVNNAG  +HGSFF+ +  ++  +I LN  A+  L+HA G+++  RK+GGI+  SS+  S  P F TYSA+KS+V+    +LR EL    V    +EPG +ES++    R++ V+ +  G   M  + CV E+L +L  G     PG+ NK  M+V + IP  + + M
Sbjct:   72 DLATDDGIRAVVEYTADLDVGLLVNNAGTVLHGSFFRHNPEAYQHMIALNVTAVTMLAHAIGKRLGQRKRGGIVFTSSMAQSGFPNFPTYSATKSYVSTLALLLRGELAPRGVDVLCLEPGAVESEIVDVLREEGVNLDAIGMKPMPVEDCVEEALRSLHRGDAKVTPGLMNKNMMAVAKLIPEQMRLGM 261          
BLAST of Gcaud9680.t1 vs. uniprot
Match: A8F3H1_PSELT (Short-chain dehydrogenase/reductase SDR n=2 Tax=Pseudothermotoga TaxID=1643951 RepID=A8F3H1_PSELT)

HSP 1 Score: 124 bits (311), Expect = 6.940e-29
Identity = 72/166 (43.37%), Postives = 100/166 (60.24%), Query Frame = 0
Query:  289 VRLVVAACEDIEIGLLVNNAGIEVHGSFFKDSIASHSKLIDLNCKALVSLSHAFGRKMIDRKKGGIILISSVVSS-PLPYFATYSASKSFVTCFGRILREELRKYNVSTTVIEPGVIESDMSRTARKDVDFEKGGFSTMSAQQCVAESLTALAGGRIVYIPGVKNK 453
            V+ +V      ++ LL+NNAG  ++G F K  ++   K+I++N KAL SLSH F ++MI RK GGII I+SV    PLPYF+ Y+A+K++V  F   L  ELRKYNV    + PG  E+     A K+   +K G S M   + VA +L A   G +VY PG+KNK
Sbjct:   71 VKSLVVDLSKYQVDLLINNAGFGLYGEFTKLELSEIEKMIEVNIKALTSLSHIFSKEMIARKFGGIINIASVAGHIPLPYFSAYAATKAYVYNFSLGLWAELRKYNVHVLCVSPGPTETRFFERAFKNQSLQKFG-SRMKPDEVVAGTLKAFEKGSVVYTPGMKNK 235          
BLAST of Gcaud9680.t1 vs. uniprot
Match: H8XTN5_FLAIG (Probable short-chain type dehydrogenase n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) TaxID=1094466 RepID=H8XTN5_FLAIG)

HSP 1 Score: 122 bits (305), Expect = 5.950e-28
Identity = 69/172 (40.12%), Postives = 101/172 (58.72%), Query Frame = 0
Query:  282 DWRANNFVRLVVAACEDIEIGLLVNNAGIEVHGSFFKDSIASHSKLIDLNCKALVSLSHAFGRKMIDRKKGGIILISSVVS-SPLPYFATYSASKSFVTCFGRILREELRKYNVSTTVIEPGVIESDMSRTARKDVDFEKGGFSTMSAQQCVAESLTALAGGRIVYIPGVKN 452
            D  A+N +  +  A E++E+GL+V NA +EVHG F  +++ S   L+ LN    + L+H FG KM  RK+GGII +SS      +PYFA Y+ASK+++   G+ L  EL+K+NV  TV+ PG  ++DM   +  DVDF+K   +       V  +L AL G +   IPG  N
Sbjct:   67 DLLADNAISEITNATENLEVGLIVLNAAVEVHGDFTNNNLQSELDLVKLNVTRPLQLAHHFGNKMKQRKRGGIIFLSSTFGHQSVPYFANYAASKAYILSLGQALNYELKKFNVDVTVLSPGPTKTDMI-ASMTDVDFKKMPVTFQEVTPVVKTALNAL-GSKQAVIPGAWN 236          
BLAST of Gcaud9680.t1 vs. uniprot
Match: A0A2V3IVQ9_9FLOR (Inactive hydroxysteroid dehydrogenase-like protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVQ9_9FLOR)

HSP 1 Score: 120 bits (302), Expect = 1.600e-27
Identity = 69/178 (38.76%), Postives = 103/178 (57.87%), Query Frame = 0
Query:  292 VVAACEDIEIGLLVNNAGIEVHGSFFKDSIASHSKLIDLNCKALVSLSHAFGRKMIDRKKGGIILISSVVSSPLPYFATYSASKSFVTCFGRILREELRKYNVSTTVIEPGVIESDMSRTARKDVDFEK-GGFSTMSAQQCVAESLTALAGGRIVYIPGVKNKVSMSVMRTIPADISM 468
            VV     IE+GLL+NNAG+E HG F   S  +  +LI LN  A+  L+HA+G +M  +K+GGII +SS+ SS +PY + YS+SK++V+     L +E R++ V    +EPG +ES+M  T  K+    K    S M    CV+E+L    G R    PG  N++    +R +P  ++M
Sbjct:   74 VVQETSAIEVGLLINNAGMETHGPFLSSSQQALQQLIALNICAVTHLAHAYGNRMCAQKRGGIIFVSSLSSSGIPYLSAYSSSKAYVSTLAGTLHQEFRQHGVCCMALEPGFVESEM--TLPKESALGKHAATSMMPVNVCVSEALRVF-GTRTFCTPGFMNRLRKVALRMLPRSLAM 248          
BLAST of Gcaud9680.t1 vs. uniprot
Match: UPI0005971D32 (SDR family oxidoreductase n=1 Tax=Thermotoga profunda TaxID=1508420 RepID=UPI0005971D32)

HSP 1 Score: 114 bits (286), Expect = 2.140e-25
Identity = 64/167 (38.32%), Postives = 98/167 (58.68%), Query Frame = 0
Query:  300 EIGLLVNNAGIEVHGSFFKDSIASHSKLIDLNCKALVSLSHAFGRKMIDRKKGGIILISSVVSS-PLPYFATYSASKSFVTCFGRILREELRKYNVSTTVIEPGVIESDMSRTARKDVDFEKGGFSTMSAQQCVAESLTALAGGRIVYIPGVKNKVSMSVMRTIPAD 465
            ++ LL+NNAG  ++G F + ++    K+I+LN K L +LSH F +KMI+R+ GGII ISSV    PLPYF+ Y+A+K++V  F   L  EL++YNV    + PG  E+     A +    ++ G + M   +    +L A   G IVY PG+KN+  + V + +  D
Sbjct:   82 QVDLLINNAGFGLYGEFTELALDEIEKMIELNIKTLTTLSHVFAKKMIERRSGGIINISSVAGHIPLPYFSAYAATKAYVYNFSLALWAELKRYNVHVMCVSPGPTETRFFERAFRQQSIQRFG-NRMKPNEVAIGALRAFEKGSIVYTPGLKNRFIVFVGKKLMPD 247          
BLAST of Gcaud9680.t1 vs. uniprot
Match: A0A545UJ42_9GAMM (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Aliikangiella coralliicola TaxID=2592383 RepID=A0A545UJ42_9GAMM)

HSP 1 Score: 111 bits (278), Expect = 3.120e-24
Identity = 64/200 (32.00%), Postives = 112/200 (56.00%), Query Frame = 0
Query:  280 VRDWRANNFVRLVVAACEDIEIGLLVNNAGIEVHGSFFKDSIASHSKLIDLNCKALVSLSHAFGRKMIDRKKGGIILISSVVS-SPLPYFATYSASKSFVTCFGRILREELRKYNVSTTVIEPGVIESDMSRTARKDVDFEKGGFSTMSAQQCVAESLTALAGGRIVYIPGVKNKVSMSVMRTIPADISMKMGNALIDQM 478
            V D  A +F+  V     D++IG+LVNNAG    G F K+ +A+  +L+++NC+A+ +L+H +GR M  R++G II  +S+V  + +P + TY+ASKS+   F   L  EL+ +N+    + PG   ++ +     + +        M +   V  +L +L G + V+I G+ NK+++  +R IP  I+ K+   L+  M
Sbjct:   67 VADLNAQDFLTSVAEQTADLKIGILVNNAGFTNQGEFLKNDLAAEERLVNVNCRAVTTLAHHYGRLMCQRERGAIIFTASIVGFTSVPLWGTYAASKSYDLLFAEALAVELKPHNIDVMALCPGSTHTEFA-----NYEGFLAKLFVMKSDDVVGGALKSL-GRKTVHIAGLMNKITVFSLRFIPRRIAAKLFGTLVRNM 260          
BLAST of Gcaud9680.t1 vs. uniprot
Match: A0A2S7KUR8_9FLAO (Uncharacterized protein n=1 Tax=Polaribacter filamentus TaxID=53483 RepID=A0A2S7KUR8_9FLAO)

HSP 1 Score: 111 bits (277), Expect = 4.670e-24
Identity = 72/188 (38.30%), Postives = 106/188 (56.38%), Query Frame = 0
Query:  289 VRLVVAACEDIEIGLLVNNAGIEVHGSFFKDSIASHSKLIDLNCKALVSLSHAFGRKMIDRKKGGIILISSVVSS-PLPYFATYSASKSFVTCFGRILREELRKYNVSTTVIEPGVIESDMSRTARKDVDFEKGGFSTMSAQQCVAESLTALAGGRIVYIPGVKNKVSMSVMRTIPADISMKMGNALI 475
            V LV    EDI  GLLV  AG+EV+G+F K SI    KLI +N  + + L+H F + M++RKKGGI++++S+    P PYF+ Y+ SK++V  FG  L  EL+   V  +V+ PG+ ++ M   A   VD+ K   + M         L  L G R + IPG KNKV  ++ +  P ++  KM   +I
Sbjct:   75 VELVKKVGEDI--GLLVIAAGVEVNGAFEKTSIEKELKLIYINVVSTLQLAHYFSKGMVERKKGGILMVASLSGHMPNPYFSNYAGSKAYVLNFGASLYGELKPKGVDVSVLSPGLTKTPM--IADNGVDWSKTPMTAMEPSVVAEVGLNGL-GKRFLSIPGGKNKVMAAMAKHSPFEMQAKMNEKMI 257          
BLAST of Gcaud9680.t1 vs. uniprot
Match: A0A0R3FY06_9MYCO (Uncharacterized protein n=6 Tax=Mycobacteriaceae TaxID=1762 RepID=A0A0R3FY06_9MYCO)

HSP 1 Score: 110 bits (274), Expect = 1.210e-23
Identity = 67/199 (33.67%), Postives = 113/199 (56.78%), Query Frame = 0
Query:  282 DWRANNFVRLVVAACEDIEIGLLVNNAGIEVHGSFFKDSIASHSKLIDLNCKALVSLSHAFGRKMIDRKKGGIILISSVVSS-PLPYFATYSASKSFVTCFGRILREELRKYNVSTTVIEPGVIESDMSRTARKDVDFEKGGFSTMSAQQCVAESLTALAGGRIVYIPGVKNKVSMSVMRTIPADISMKMGNALIDQMM 479
            D  + + V  +  A E ++IGL+V NAG+ V G F  +   + + L+ LN    + L+H F   ++ R++GGIIL++S+    P+PY ATYSASK+FV+ FG+ L  EL    V  TV+ PG++++ M R +   VD      S    +  V  +L  L G + + IPG  NK++    R +P  +++++G  ++ Q++
Sbjct:   67 DLVSESAVAELARATEALDIGLVVLNAGVLVIGPFLDEPCDTQTNLVLLNALRPMQLAHHFCSILVRRRRGGIILVASLAGQHPVPYEATYSASKAFVSSFGQSLHTELAGTGVDVTVLAPGMVDTPMIRDS--PVDVTNTQLSVTGPEPVVQAALDGL-GKKALVIPGATNKLADIAFRVLPRSVAVRLGGRIMRQIL 262          
The following BLAST results are available for this feature:
BLAST of Gcaud9680.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUE2_9FLOR3.350e-5848.97Testosterone 17-beta-dehydrogenase 3 n=1 Tax=Graci... [more]
A0A2V3IX20_9FLOR8.210e-5353.33Very-long-chain 3-oxoacyl-CoA reductase n=1 Tax=Gr... [more]
R7QG19_CHOCR7.100e-3237.89Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A8F3H1_PSELT6.940e-2943.37Short-chain dehydrogenase/reductase SDR n=2 Tax=Ps... [more]
H8XTN5_FLAIG5.950e-2840.12Probable short-chain type dehydrogenase n=1 Tax=Fl... [more]
A0A2V3IVQ9_9FLOR1.600e-2738.76Inactive hydroxysteroid dehydrogenase-like protein... [more]
UPI0005971D322.140e-2538.32SDR family oxidoreductase n=1 Tax=Thermotoga profu... [more]
A0A545UJ42_9GAMM3.120e-2432.00SDR family NAD(P)-dependent oxidoreductase n=1 Tax... [more]
A0A2S7KUR8_9FLAO4.670e-2438.30Uncharacterized protein n=1 Tax=Polaribacter filam... [more]
A0A0R3FY06_9MYCO1.210e-2333.67Uncharacterized protein n=6 Tax=Mycobacteriaceae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 346..362
score: 33.08
coord: 299..310
score: 47.04
coord: 392..409
score: 23.66
coord: 371..390
score: 32.36
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 371..390
score: 34.45
coord: 299..310
score: 49.54
coord: 352..360
score: 52.57
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 290..415
e-value: 1.9E-25
score: 89.5
NoneNo IPR availableGENE3D3.40.50.720coord: 279..474
e-value: 1.3E-28
score: 102.0
NoneNo IPR availablePANTHERPTHR43131DEHYDROGENASEcoord: 297..469
NoneNo IPR availableCDDcd05233SDR_ccoord: 292..449
e-value: 6.91477E-27
score: 106.599
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 358..386
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 292..468

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_731_length_19008_cov_3.951948contigNODE_731_length_19008_cov_3.951948:13253..16322 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9680.t1Gcaud9680.t1Gracilaria caudata M_176_S67 malemRNANODE_731_length_19008_cov_3.951948 13253..16322 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9680.t1 ID=Gcaud9680.t1|Name=Gcaud9680.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=488bp
MNGMSPKRSEPERVVEFFSELIRLVLVIPDERKVLMMKYDAASTPLLYDS
LLLLTYSETILQTTPNTAANRIEQDVSKMLLLEDKEDSQLRLTENMAWQD
CSFVKGLNTSDNDSLIGVTVRVVKFLEKENSCSQKYLAASTPTGLTILRV
LPSVTLTVVGMSDELAGFASREFIPLENRNEEQALQLLINCLGSLHKASL
EQKERLVRGGCVVLDSSALLTELRRWRDDPRGNLCGLMSDFESIIPLVEA
RLRDLDEYGIPFDFDTWGRLDQQCWFEERVRDWRANNFVRLVVAACEDIE
IGLLVNNAGIEVHGSFFKDSIASHSKLIDLNCKALVSLSHAFGRKMIDRK
KGGIILISSVVSSPLPYFATYSASKSFVTCFGRILREELRKYNVSTTVIE
PGVIESDMSRTARKDVDFEKGGFSTMSAQQCVAESLTALAGGRIVYIPGV
KNKVSMSVMRTIPADISMKMGNALIDQMMDPEIMKPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR020904Sc_DH/Rdtase_CS
IPR036291NAD(P)-bd_dom_sf