Gcaud9647.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9647.t1
Unique NameGcaud9647.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1009
Homology
BLAST of Gcaud9647.t1 vs. uniprot
Match: A0A2V3J181_9FLOR (Germinal-center associated nuclear protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J181_9FLOR)

HSP 1 Score: 395 bits (1015), Expect = 3.210e-113
Identity = 237/625 (37.92%), Postives = 344/625 (55.04%), Query Frame = 0
Query:  362 RQRIVAMAKKARMDRHKQRCDRVLSEFATQQEHIENSLRRTSILLQYL-ETGGMSRSDALEACYSGFSHLDRAVAVIKRVEEFLKEAERWSWEGQEFPRLPFSTLCKLREKGNAAWEKISECRRTALKRSPEPQEADKLPTKFSYGNKRNVAYMKSRLDKSTNTVTDGTPIISLSTNESVPRPGLEISSAFEILGRLGVLQWQAVVVREEQASCGASGIATAWLRSRLGTKVGENGIVLNARNTGIINYPCLSVLQVDKDDSIPVTASMVIWSVDVSKGESGLHEDQRNIEERLRHIQSQTGAAPTVRPFLALVCFNAKGPISHGVKEELEKGSESEWAQCLISQDLVRGVACVLLSPETVLKRAPDAQLTDAIQEGVISH-HSRCKTHGVDLNLQVVRDSLVEVGNSAWMDTLDEQILCPEASNGNVLNELIEKLNNNWRTLAKNVLDNAKTWPTEFSRHRLHFARVGAEINRRMRVPIPSESDGDSYAGYLRVLCMSTGITAPKIRDD-GLQGLVEFCRALGFIMPRLVSWLLRDLKDVQVPLPRRTNDEGQRSKICGLNILFNSVFGGAVNGNSRDLRHRMGNRSCLGKRRRDIDGEEN----LYGSDSSSRPRRRRLSLNE 979
            RQRI+++A+KAR  R+K+RC+R++ EF  + E I   +R  S  ++ L ET   SR++ L  C  G   L R   +I+  + FL EA+RW WEGQ FPR P   L + RE GNA W  I   R  AL RSPEP E +   +          +  KS+L      VTD  PI +LS+ + VP  G EI   F  + + G+++WQ V++  ++ +  +S +  AWLRSRL  + G    V+N RN   + YPC+SVL +     IP ++S +IW+ D S  +S    D   IE+ L+H+++Q+    T  PFL +VCFN  GPIS  V++E +    +EW   L+   LVR V  V+LS ETV++ + D   +  +QE V S  ++  ++      L  + D L++VGN AWM  L +Q+     ++ + L  +I  +N+ W+T+A  + D  + WPTEFS HR HFA +  E+++RMR+P+P ++D      YLRVLC   GIT PK+ D  G Q   EFC AL  +M  +V  LL +L    +PLP   +D     ++  LNILF S+ G      SR  + R G    LGKRRR    +EN       +D S  PRR  LSL +
Sbjct: 1173 RQRIISIAQKAREVRYKERCERLMLEFKERSEAIGQCMRIASDAIKSLDETRKPSRTETLGHCSHGLESLRRVSILIRAADRFLDEAQRWPWEGQPFPRGPLQALFRFRENGNALWTAIDRHRLKALDRSPEPAEEESDSSNADRRYSTVWSNPKSQLQGFIKAVTDRIPIRALSSGKPVPHSGKEIDGVFNAMKKRGLVRWQGVLLGSDKETSPSSSVGMAWLRSRLEREPGTGSDVINHRNLEKVAYPCMSVLHLSNHLRIPSSSSTIIWAADGSDYDSAFLRDLNAIEQALKHLRAQSEKTSTGPPFLIVVCFNCNGPISTRVRQETQGEENNEWIASLVGHGLVRAVRIVMLSRETVIQHSEDQSFSRFLQESVTSKVNTELRSTS---RLSRLDDRLLKVGNQAWMKALHDQLTRSHWNDSDALPSIIRHINHAWQTVAGTIEDEKQNWPTEFSHHREHFANMKTEVSKRMRLPLPPQTDESDLREYLRVLCDMAGITTPKLSDKKGFQAYAEFCHALSSVMLPVVVCLLDELHHEVIPLPGIDHDPQTAMRVSQLNILFASILGQQPKPLSR--QDRSGYEGTLGKRRRGHGEDENRSHHTQATDMSGLPRR--LSLED 1790          
The following BLAST results are available for this feature:
BLAST of Gcaud9647.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J181_9FLOR3.210e-11337.92Germinal-center associated nuclear protein n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..349
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_3174_length_3891_cov_7.190000contigNODE_3174_length_3891_cov_7.190000:130..3312 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9647.t1Gcaud9647.t1Gracilaria caudata M_176_S67 malemRNANODE_3174_length_3891_cov_7.190000 130..3312 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9647.t1 ID=Gcaud9647.t1|Name=Gcaud9647.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1009bp
MWDEEAAKKLLKSNPRYKNKILSLSCWKDRKTDDDNVKTKTETSRGDERR
ISFQERKGTTEQKHQRQIEVLPRDTGVVEEKKREKEAKKESQLSEGHKRG
SSPREPYREMQPDMLHGKADATLSKDGAQVERVPEKIHVPARNEYCRDVV
QKMDGLVRPSPSSYAESQSQALKHKEDTLAMDWNKCQSRNTNAVENLGTA
HRIGQNSCELGSEPDPTKSIEKYRHSAAISEEHKPEEVRPSPVAVAKSAT
QALTRKEGTVAVSCSINPSGKPDAVADLENARSTGEHSSTEKQKGSEYVP
DREDVVKKRVPQAAPDEKCGSSTPGLQSNEKEVPLHSKTENGLGGNGQDK
LRERASRVVQERQRIVAMAKKARMDRHKQRCDRVLSEFATQQEHIENSLR
RTSILLQYLETGGMSRSDALEACYSGFSHLDRAVAVIKRVEEFLKEAERW
SWEGQEFPRLPFSTLCKLREKGNAAWEKISECRRTALKRSPEPQEADKLP
TKFSYGNKRNVAYMKSRLDKSTNTVTDGTPIISLSTNESVPRPGLEISSA
FEILGRLGVLQWQAVVVREEQASCGASGIATAWLRSRLGTKVGENGIVLN
ARNTGIINYPCLSVLQVDKDDSIPVTASMVIWSVDVSKGESGLHEDQRNI
EERLRHIQSQTGAAPTVRPFLALVCFNAKGPISHGVKEELEKGSESEWAQ
CLISQDLVRGVACVLLSPETVLKRAPDAQLTDAIQEGVISHHSRCKTHGV
DLNLQVVRDSLVEVGNSAWMDTLDEQILCPEASNGNVLNELIEKLNNNWR
TLAKNVLDNAKTWPTEFSRHRLHFARVGAEINRRMRVPIPSESDGDSYAG
YLRVLCMSTGITAPKIRDDGLQGLVEFCRALGFIMPRLVSWLLRDLKDVQ
VPLPRRTNDEGQRSKICGLNILFNSVFGGAVNGNSRDLRHRMGNRSCLGK
RRRDIDGEENLYGSDSSSRPRRRRLSLNELRSATARVFNEEYRSIKVLGK
HRKVANLG*
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