Gcaud9640.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9640.t1
Unique NameGcaud9640.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length335
Homology
BLAST of Gcaud9640.t1 vs. uniprot
Match: A0A2V3IL84_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL84_9FLOR)

HSP 1 Score: 178 bits (451), Expect = 5.750e-50
Identity = 131/329 (39.82%), Postives = 176/329 (53.50%), Query Frame = 0
Query:   12 HFEAGGEILSVGRTGKNHDALIMEDENGSLGRTTTLHEWGLEARITLVEGEEGEGWGVSFDYSVFFRDALE-PDDLEGGGFSISTVESFPGEPPIAVVEGPLYLMVLRHKVFQYSLPPALHAEKYM---FAKCALERTQLEKNGTVDVTVDCTVANFERNTVKNGVVVTIPFNPFPLKILDQSSSGLNLSSLGQRSVMAFDLANALSQKQCGDTYEAYLQMSDVSITSLIIIAALAFVALVCLVAAIVSFKMTHGTFNWNGSYQRVINLAANSESIGVATSSRSVHIVDKADVVVEA--CQEGDGYRIHIVSRDTVSYPESKASPHLIR 334
            HF  GG+IL VGRTG+N DAL++EDE  S G    L E  +EA+I  V    G  + V  +   F  +    P+DL     +I  V +    P I + EGPLY ++    +F +        E YM   F KCA+ R  L  +    V  +C+VA  ER+T K+G+          L+ LD +   +++S LGQ S+M  DLA  L  K CGDTY AYL  S++S TS++I+ AL   AL   VAAI+S  +T  TFNWNGSYQRV++LAA+SE + V         V  ADVV+E      G G  + IV  D  S P  KAS  L++
Sbjct:    2 HFNTGGKILRVGRTGQNLDALLVEDEEYSHGHAHLLKESFIEAKIN-VSSPRGN-YKVDINAWDFLENTTGYPEDLTAHYSTI--VRNATYLPTIQITEGPLYFVIC---IFGHG------TENYMKCAFGKCAVPRVDLPYSRFRLVRGNCSVAFLERSTAKSGIFRGFEPEASSLRYLDLAFGHVDVSFLGQGSIMINDLAITLQSKPCGDTYVAYLPPSNISRTSVVIVCALGITALASCVAAIMSLFITRHTFNWNGSYQRVVSLAASSEQMRVF-GRNDFAAVATADVVIEERPTHHGKGLCVRIVPTDATSNPVPKASRKLLQ 316          
BLAST of Gcaud9640.t1 vs. uniprot
Match: A0A2V3J1R8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1R8_9FLOR)

HSP 1 Score: 171 bits (433), Expect = 1.720e-46
Identity = 104/270 (38.52%), Postives = 153/270 (56.67%), Query Frame = 0
Query:    1 MLGIATERIITHFEAGGEILSVGRTGKNHDALIMEDENGSLGRTTTLHEWGLEARITLVEGEEGEGWGVSFDYSVFFRDALEP-DDLEGGGF----SISTVESFPGEPPIAVVEGPLYLMVLRHKVFQYSLPPALHAEKYMFAKCALERTQLEKNGTVDVTVDCTVANFERNTVKNGVVVTIPFNPFPLKILDQSSSGLNLSSLGQRSVMAFDLANALSQKQCGDTYEAYLQMSDVSITSLIIIAALAFVALVCLVAAIVSFKMTHGTFN 265
            M+G+ATER+I HF AGG+++SVG+TG+NHDA+++E+E  SLG    + +W +EARI + +G        + + + F R+       +    F    S+  + + P     A+V+GP Y++V  H      L      EK  F++CA+   +L+    V V  +C+VA  ER   K G   +   +  PLK LD S  GL++S LG+RS M  DLA  L  + CGDTY AYL  S+VS  S+ II +L  ++LV  V AI+SF +T  TFN
Sbjct:  130 MIGMATERVIKHFNAGGKVISVGKTGRNHDAILLENERSSLGHAVVVDKWDMEARINVSDGNIST---FTLNLTQFLRNTTGYLHSVYSNDFFLTHSVVPMNTTPLPNNGAIVDGPFYVIVCTHN----PLVNENKMEKCAFSRCAVPHVELQPGEVVSVRGNCSVATIERQAFKAGAFRSYYGSASPLKYLDISFKGLDVSELGKRSQMVGDLAFILRSRPCGDTYVAYLPPSEVSWVSIAIICSLGTISLVVSVVAIMSFSITRNTFN 392          
BLAST of Gcaud9640.t1 vs. uniprot
Match: A0A2V3IYY8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYY8_9FLOR)

HSP 1 Score: 96.3 bits (238), Expect = 1.480e-20
Identity = 61/150 (40.67%), Postives = 88/150 (58.67%), Query Frame = 0
Query:  187 LDQSSSGLNLSSLGQRSVMAFDLANALSQKQCGDTYEAYLQMSDVSITSLIIIAALAFVALVCLVAAIVSFKMTHGTFNWNGSYQRVINLAANSESIGVATSSRSVHIVDKADVVVEACQEGDG--YRIHIVSRDTVSYPESKASPHLIR 334
            LD++ + L+++ LGQRS+M  DL+  L   +C +TY AYL +S VS  S+ I+ +L  +++   VAAI+SF +T  T NWNGS  RVINLAA+S+ IG+    +    V   DVV+E  +   G    +HIVS    S      S  LI+
Sbjct:    3 LDEAFNALDVAELGQRSIMVSDLSEILRSPKCSNTYVAYLPLSKVSWVSIAILCSLGSISVFWCVAAIISFFVTKDTINWNGSCDRVINLAASSDPIGLC-DHKDFTAVGSTDVVMEERETYGGPIQHVHIVSASVSSQTVLGTSSKLIQ 151          
BLAST of Gcaud9640.t1 vs. uniprot
Match: A0A2V3IYW1_9FLOR (FHA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYW1_9FLOR)

HSP 1 Score: 76.3 bits (186), Expect = 9.050e-13
Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = 0
Query:    1 MLGIATERIITHFEAGGEILSVGRTGKNHDALIMEDENGSLGRTTTLHEWGLEARITLVEGEE 63
            M+G A ERI+ HF AGG IL +GRTG++HDA++MEDE  SLG    + +W ++A++ L +G E
Sbjct:  131 MIGFALERIVKHFRAGGNILRLGRTGRSHDAILMEDEKKSLGHAVLVDKWDMQAKLNLSDGGE 193          
The following BLAST results are available for this feature:
BLAST of Gcaud9640.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IL84_9FLOR5.750e-5039.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1R8_9FLOR1.720e-4638.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IYY8_9FLOR1.480e-2040.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IYW1_9FLOR9.050e-1350.79FHA domain-containing protein n=1 Tax=Gracilariops... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..235
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 236..257
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 258..334
NoneNo IPR availableTMHMMTMhelixcoord: 235..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1619_length_9456_cov_4.677523contigNODE_1619_length_9456_cov_4.677523:5386..6390 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9640.t1Gcaud9640.t1Gracilaria caudata M_176_S67 malemRNANODE_1619_length_9456_cov_4.677523 5386..6390 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9640.t1 ID=Gcaud9640.t1|Name=Gcaud9640.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=335bp
MLGIATERIITHFEAGGEILSVGRTGKNHDALIMEDENGSLGRTTTLHEW
GLEARITLVEGEEGEGWGVSFDYSVFFRDALEPDDLEGGGFSISTVESFP
GEPPIAVVEGPLYLMVLRHKVFQYSLPPALHAEKYMFAKCALERTQLEKN
GTVDVTVDCTVANFERNTVKNGVVVTIPFNPFPLKILDQSSSGLNLSSLG
QRSVMAFDLANALSQKQCGDTYEAYLQMSDVSITSLIIIAALAFVALVCL
VAAIVSFKMTHGTFNWNGSYQRVINLAANSESIGVATSSRSVHIVDKADV
VVEACQEGDGYRIHIVSRDTVSYPESKASPHLIR*
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