Gcaud9637.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9637.t1
Unique NameGcaud9637.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length777
Homology
BLAST of Gcaud9637.t1 vs. uniprot
Match: A0A2V3IMR3_9FLOR (BTB domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMR3_9FLOR)

HSP 1 Score: 465 bits (1196), Expect = 1.320e-149
Identity = 290/756 (38.36%), Postives = 402/756 (53.17%), Query Frame = 0
Query:    1 MAKHRPIPLHTWQLDRYTLTPTACHLQAFENRRRPEPDPLVTLRFS---RSEGGPEAAQELHVPASALRCSSPPFQALVASGFLESTTHVVHLEPEAYPAFQVIVPFLKCEDIDMRTMPDSLPIYADRWGLDDLLDACFAYAETRPWPTVDRFMLFALPLMRFLRVPHTFKHVFAVRLGYGLEEIIDWFTGEEDYRIERLRSIPVAKS-DSEASEDAPGIRCSILVDGRP----CSRPPKREL-CRRYFCDDHFETEYLNGSPRYGATVENSCTPEVSPASPRARKRQRTHYTTASASPHKKNTNEKSSNLADRHSASKRVSIPAQNLEHHCQEKINSDLQANRNGGVEAMLETAADSGGSSPMRKTRS--CEAGATCSKPSNAASGHCSDEGGEKAVSLSSLSFSDETGASSKKANPTTRSSGGEEKKGKKRNRHPESSDREYAFWDAMRVQNMLPKALKELIWYAGDGYISFILKGILHVLDNDLTEDNKVELLKVLPWERKDFSATLGSNSPFTWSTSDWRVVAKAQALSAHARAGGGQEYTKILHWPNFVGNVCEPSSSAHSWNKREKYTFIDDEDDLSLYVSWRTRTRCDGDYAPLLLHVSNCESDALESINPSLLERPLDVSVSVRELDCGCEVGSETKMPLVPRMFYGLLRSDLKVRALVASPGLTFTIMDDFEMSRWTRRHQPSCGLVLSLRIRIC-DEHQEGTDKKSDGCTEERLGRGKCPCGSCLEDDISSDEEALEGDVYSDASE 744
            MAK +PI L TWQLD  TLTPTACHLQ +ENRRRP PDPLVTLRF+    +    E+ QEL + AS LR SS P +ALV+SGFLESTTHVVHL+ +++  F+VIV FL+CEDIDM T+PD L ++ADRWGLD L +AC AYAE R W +VD FMLF+LPLMRFL VP+TFK VFA RL   L ++ DW +G+E  R +R R  P   +  S A   +    C+ +V   P    C RP        +++C +H  T     SP+      +S +       P  +    T       +PH           A +  AS   ++ A+           S               T+  S   S  R T     E      K              ++  SL + + + +     ++ +   RS       GKKR R+ ES+++E A WDAM+ Q+ML KALKEL WYA  G + FIL G+L V+++ L+E  +V LL++LPW+R+DF   L S+    WST +WR+VA+AQA SA   AGGG EY+ + +W  F   VC+ S +     +RE     D    L ++++   R +    + PL L +S  +  + E +       PL VS+ +R +DC CE  S +K  L     YG    ++KV+ L+ +P   F I+ +  +++W + HQPSCGL L + +RIC D+     D         R  RG CPCGSC E+ +S D    E D+Y  AS+
Sbjct:    1 MAKRKPIALRTWQLDGSTLTPTACHLQCYENRRRPNPDPLVTLRFAAPAHASSARESPQELFIHASVLRDSSSPLRALVSSGFLESTTHVVHLDHQSFQPFKVIVSFLQCEDIDMTTVPDHLAVFADRWGLDVLFEACLAYAEIRSWSSVDEFMLFSLPLMRFLHVPYTFKCVFASRLALCLSDVQDWISGDEGIRNQRRRLAPTLNNRHSRAQYTSHETICNTIVGTSPNDILCGRPAVLSHGSAKFYCIEHLVTVVSEDSPKPAERPPSSPSSSAQVNPPDNQSPVPTQAENTDRAPH-----------ATKSFASCEPAVVAKKASTSSVSVARSSQAXXXXXXXXXXXXTSKPSESKSEKRPTEQPVTEVQDAIQK--------------QRLKSLPAFTSNTDRSTRPQQLDSEARSFEMVSIAGKKRGRNSESAEKEQALWDAMKSQHMLYKALKELAWYAMPGCVPFILDGVLRVMEDKLSESEQVALLRILPWDRRDFEQVLNSDFTSKWSTREWRIVARAQAQSARI-AGGGDEYSAVFYWWGFADEVCQSSGAPFGKLRRETTMLAD---GLYIHLALHAREKRKLGHHPLFLTMSVLDDTSSEDLR----NMPLLVSIHLRAMDCSCEAASCSKSALDYNQSYGFRHKNVKVKFLLGTP--VFEILSEHGVAQWVKLHQPSCGLALRVVLRICKDQVDPEADMNDAHDVRLRRARGICPCGSCYEEGLSDDSGQGE-DIYIIASD 720          
BLAST of Gcaud9637.t1 vs. uniprot
Match: A0A2V3II75_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II75_9FLOR)

HSP 1 Score: 94.0 bits (232), Expect = 2.830e-16
Identity = 64/181 (35.36%), Postives = 95/181 (52.49%), Query Frame = 0
Query:    8 PLHTWQLDRYTLTPTACHLQAFENRRRPEP--DPLVTL----RFSRSEGGPEAAQELHVPASALRCSSPPFQALVASGFLESTTHVVHLEPEAYPAFQVIVPFLKCEDIDMRTMPDSLPIYADRWGLDDLLDACFAYAETRPWPTVDRFMLFA-LPLMRFLRVPHTFKHVFAVRLGYGLEE 181
            PL  W+L   +L+PT CHLQA   R + +   DPL+T+     ++           L +  S LR +SP   AL+ +    S   V+   P+    F ++  FL  + +D+   P  LP+ A RWGL+ L +ACFAYAE R  PT  R +L+  +P++  +RVP TFK  FA+     L+E
Sbjct:   13 PLGPWELRGASLSPTRCHLQAHARRLQSQSSTDPLITIIVQPPYTPXXXXXXXXXALTIHRSLLRAASPVLSALIPAD-ARSPVRVLDW-PDT---FSLLRKFLYLQPLDLAVAPPDLPLAAARWGLNQLFEACFAYAE-RNLPTDMRALLWRWMPVLNAVRVPPTFKTTFALSFVAALDE 187          
The following BLAST results are available for this feature:
BLAST of Gcaud9637.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IMR3_9FLOR1.320e-14938.36BTB domain-containing protein n=1 Tax=Gracilariops... [more]
A0A2V3II75_9FLOR2.830e-1635.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011333SKP1/BTB/POZ domain superfamilyGENE3D3.30.710.10Potassium Channel Kv1.1; Chain Acoord: 26..142
e-value: 2.3E-6
score: 29.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 389..429
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..357
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 389..409
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 728..776
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 410..429

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_432_length_25684_cov_4.561794contigNODE_432_length_25684_cov_4.561794:23177..25507 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9637.t1Gcaud9637.t1Gracilaria caudata M_176_S67 malemRNANODE_432_length_25684_cov_4.561794 23177..25507 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9637.t1 ID=Gcaud9637.t1|Name=Gcaud9637.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=777bp
MAKHRPIPLHTWQLDRYTLTPTACHLQAFENRRRPEPDPLVTLRFSRSEG
GPEAAQELHVPASALRCSSPPFQALVASGFLESTTHVVHLEPEAYPAFQV
IVPFLKCEDIDMRTMPDSLPIYADRWGLDDLLDACFAYAETRPWPTVDRF
MLFALPLMRFLRVPHTFKHVFAVRLGYGLEEIIDWFTGEEDYRIERLRSI
PVAKSDSEASEDAPGIRCSILVDGRPCSRPPKRELCRRYFCDDHFETEYL
NGSPRYGATVENSCTPEVSPASPRARKRQRTHYTTASASPHKKNTNEKSS
NLADRHSASKRVSIPAQNLEHHCQEKINSDLQANRNGGVEAMLETAADSG
GSSPMRKTRSCEAGATCSKPSNAASGHCSDEGGEKAVSLSSLSFSDETGA
SSKKANPTTRSSGGEEKKGKKRNRHPESSDREYAFWDAMRVQNMLPKALK
ELIWYAGDGYISFILKGILHVLDNDLTEDNKVELLKVLPWERKDFSATLG
SNSPFTWSTSDWRVVAKAQALSAHARAGGGQEYTKILHWPNFVGNVCEPS
SSAHSWNKREKYTFIDDEDDLSLYVSWRTRTRCDGDYAPLLLHVSNCESD
ALESINPSLLERPLDVSVSVRELDCGCEVGSETKMPLVPRMFYGLLRSDL
KVRALVASPGLTFTIMDDFEMSRWTRRHQPSCGLVLSLRIRICDEHQEGT
DKKSDGCTEERLGRGKCPCGSCLEDDISSDEEALEGDVYSDASEVDEGDS
EDDDDEGDSEDYSEDGDDDFIIVAAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011333SKP1/BTB/POZ_sf