Gcaud963.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud963.t1
Unique NameGcaud963.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length321
Homology
BLAST of Gcaud963.t1 vs. uniprot
Match: A0A2V3J091_9FLOR (Glutathione S-transferase T2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J091_9FLOR)

HSP 1 Score: 177 bits (450), Expect = 7.970e-50
Identity = 107/273 (39.19%), Postives = 155/273 (56.78%), Query Frame = 0
Query:   26 KTTRGSGFTAAEDAAIAKAWITASENAIVGTEQKKDVFYASITRLYNEKFKPPNREFRSFESVKSRSKAIVKQCVLFSGCHARVLRSKPTGVSRTDIIRLATGLYNGVKMDSTSDDCGKAFKFLSAWEVLHDHEKFMAGTSHS-------SHISSEDHQVVLEDVSDDANGSESKGSGSRPSSLKDQKASSPRPIGRKRAKKEKECMADKAKKLKLAAESIELQRERNEALHRHVEIMLFTNAPSGCNESETLEYFQLMRSHALRRVRKLEAS 291
            K  RG  ++  ED  +AKAW+  SE+ IVG+EQK   FY  +   Y +  KP    F    S  +R K I+K CV FS CH+ V+ SKPTGV+  DIIR+ T L+NG K+    +D G+ FKFL AW +L  HEKF AG   +        + ++  +    ++VSD +  S S  S  RP + +  K    RP+GR++AK+  +   +  KK+K+A E+++ Q+ RN AL RH +I+LFTN P G +  +  E F LM+  AL  +R   A+
Sbjct:    4 KNVRGFNYSTEEDVVLAKAWVRVSEDPIVGSEQKGYTFYTKVWNEYKQA-KPGELPFLPLASTSTRVKTILKHCVRFSACHSTVVGSKPTGVNDADIIRITTALFNGKKIKDPQEDIGRRFKFLDAWRILRFHEKFCAGGDSAVERQPPTGNAATPSNVPCADEVSDGSKSSSS--SDVRPPTSRSTK----RPVGRRKAKEIAQKQHNANKKIKIAQEAVKSQQNRNTALSRHNDILLFTNGPGGVHSEQAQEVFSLMQEEALEALRDRAAA 269          
BLAST of Gcaud963.t1 vs. uniprot
Match: R7QR73_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR73_CHOCR)

HSP 1 Score: 174 bits (442), Expect = 9.710e-49
Identity = 104/269 (38.66%), Postives = 153/269 (56.88%), Query Frame = 0
Query:   28 TRGSGFTAAEDAAIAKAWITASENAIVGTEQKKDVFYASITRLYNEKFKPPNREFRSFESVKSRSKAIVKQCVLFSGCHARVLRSKPTGVSRTDIIRLATGLYNGVKMDSTSDDCGKAFKFLSAWEVLHDHEKFMAG----------TSHSSHISSEDHQVVLEDVSDDANGSESKGSGSRPSSLKDQKASSPRPIGRKRAKKEKECMADKAKKLKLAAESIELQRERNEALHRHVEIMLFTNAPSGCNESETLEYFQLMRSHALRRVR 286
            TRGS FT+ ED  + +AWI  SE+ + G+EQK   FY  +   Y+  F  P  E R+ ES+++ SK I K+CV F  C   V RSKPTGVS  D+IR+AT  +N V++   +D  G+ FKFL  W++L  HEKF  G          T+    I+ E    +  + S D +               +  ++  RP GRK +K+ +   A ++KKL+L +ES+  Q ERN AL ++ EI+LF++AP GC+E + + YF L+RS AL++ R
Sbjct:   22 TRGSNFTSEEDIFVGRAWIRVSEDPVTGSEQKGARFYDRMCDHYHT-FNAPGFEKRTMESIRTGSKLINKECVKFGSCFVAVRRSKPTGVSEEDMIRMATEFFNDVQIQHPNDHVGRKFKFLPVWKLLRSHEKFSGGGHGSMPGGTQTASDGLIAGEKDPFICAESSPDGD---------------EVTSTRKRPAGRKNSKEVELMQASRSKKLRLPSESVRDQGERNAALQQYNEILLFSSAPDGCDEGDAVAYFNLLRSEALKKAR 274          
BLAST of Gcaud963.t1 vs. uniprot
Match: A0A2V3IMI1_9FLOR (Glutathione S-transferase T3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMI1_9FLOR)

HSP 1 Score: 143 bits (361), Expect = 3.150e-38
Identity = 68/138 (49.28%), Postives = 95/138 (68.84%), Query Frame = 0
Query:   24 KKKTTRGSGFTAAEDAAIAKAWITASENAIVGTEQKKDVFYASITRLYNEKFKPPNREFRSFESVKSRSKAIVKQCVLFSGCHARVLRSKPTGVSRTDIIRLATGLYNGVKMDSTSDDCGKAFKFLSAWEVLHDHEKF 161
            KKK  RGS F  A++  IAKAW+  SEN+IVGT QK D FY ++T LYNE FKP NR  RS  S+K+R   I K+C++F+GC   ++R + TGVSR DII++ T +YN + M+  S++CG  FK   AW++L + +K+
Sbjct:    8 KKKIVRGSSFLPAKEEGIAKAWVKVSENSIVGTHQKGDAFYVAVTELYNETFKPANRVKRSVSSIKARCNIIRKECMIFNGCIDLLVRQEITGVSREDIIKMTTAVYNEINMNHVSEECGPPFKHYLAWKLLRNLDKY 145          
BLAST of Gcaud963.t1 vs. uniprot
Match: A0A2V3IZU4_9FLOR (NAM-associated domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZU4_9FLOR)

HSP 1 Score: 92.8 bits (229), Expect = 1.160e-18
Identity = 71/206 (34.47%), Postives = 112/206 (54.37%), Query Frame = 0
Query:  122 IIRLATGLYNGVKMDSTSDDCGKAFKFLSAWEVLHDHEKFMAGTSHSS------------HISSEDHQVVLEDVSDDANGSESKGSGSRPSSLKDQKASSPRPIGRKRAKKEKECMADKAKKLKLAAESIELQRERNEALHRHVEIMLFTNAPSGCNESETLEYFQLMRSHALRRVR---KLEASTTNRNENVSSGVQSSGQDNPH 312
            +++LA+   NG +     DDCGK F+F++A +VL +++KF   T                H  S    +  +++ +DAN   +  +GS   ++   K  + RP+GRK AK E+        KL+ AA+S+E   ERN  L R+ EIML T+AP GC+ S+ LEYF++MR+HAL  +R   K + S ++    V +  +S G D+ H
Sbjct:    1 MVQLASAFLNGRERRDALDDCGKPFRFVAASKVLKNNDKFRNVTVEQRDEGGIKSVEMGIHKFSSHSNLGSDNMCEDAN-LNTTDTGS-DLNISPPKKPTGRPVGRKHAKVERSREKYNETKLRFAAQSMEAVVERNRLLKRNYEIMLLTSAPDGCDISDLLEYFKIMRAHALEELRVACKKQRSDSDSQTEVCNSQRSEGTDDFH 204          
BLAST of Gcaud963.t1 vs. uniprot
Match: A0A2V3IR86_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR86_9FLOR)

HSP 1 Score: 74.3 bits (181), Expect = 4.520e-12
Identity = 44/87 (50.57%), Postives = 60/87 (68.97%), Query Frame = 0
Query:  207 ASSPRPIGRKRAKKEKECMADKAKKLKLAAESIELQRERNEALHRHVEIMLFTNAPSGCNESETLEYFQLMRSHAL----RRVRKLE 289
            +SS RP+GR +A ++        KKLK+AA+++ELQR+RN AL R  EI+LF+NA  G NE ETLEYF+L R  A+    RR ++LE
Sbjct:   12 SSSGRPLGRHKATEKLSKQEATGKKLKIAAKAVELQRQRNAALDRQNEILLFSNASKGVNEDETLEYFRLGRQEAIVNARRRQKELE 98          
BLAST of Gcaud963.t1 vs. uniprot
Match: A0A2V3IDU3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDU3_9FLOR)

HSP 1 Score: 63.5 bits (153), Expect = 4.030e-8
Identity = 34/84 (40.48%), Postives = 52/84 (61.90%), Query Frame = 0
Query:  208 SSPRPIGRKRAKKEKECMADKAKKLKLAAESIELQRERNEALHRHVEIMLFTNAPSGCNESETLEYFQLMRSHALRRVRKLEAS 291
            S  RP+GR++AKK  +   +  KK+K+A E+ +  + RN AL RH +I+LFTN P G +  +  E+F LM+  AL  +R   A+
Sbjct:  121 SKKRPVGRRKAKKIAQKQHNANKKIKIAQEAFKALQNRNTALSRHNDILLFTNGPGGVHSKQAQEFFSLMQEEALEALRDRAAA 204          
BLAST of Gcaud963.t1 vs. uniprot
Match: UPI001C2598AF (glutathione S-transferase T3-like n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2598AF)

HSP 1 Score: 62.0 bits (149), Expect = 5.760e-8
Identity = 40/140 (28.57%), Postives = 68/140 (48.57%), Query Frame = 0
Query:   34 TAAEDAAIAKAWITASENAIVGTEQKKDVFYASITRLYNEKFKPPNREFRSFESVKSRSKAIVKQCVLFSGCHARVLRSKPTGVSRTDIIRLATGLYNGVKMDSTSDDCGKAFKFLSAWEVLHDHEKFMAGTSHSSHISS 173
            T AE  A+  AWI+ S + I+G +Q +  F+  +T +YN K KP     R+ + + +  +   +   +F G + R      +G S +D++R A  ++          D GK FKF   WEV+   +++  G   S+  SS
Sbjct:   34 TQAETMALLDAWISTSNDPILGNQQTRKCFWDKVTNVYNTK-KPTGAFSRNLKMLCTHFERADRDVKIFCGIYKREAEQYQSGASVSDMLRAALRVFKS--------DTGKDFKFPDVWEVVKHLDRWPGGVDSSTGSSS 164          
BLAST of Gcaud963.t1 vs. uniprot
Match: A0A2V3ISJ3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISJ3_9FLOR)

HSP 1 Score: 63.2 bits (152), Expect = 8.840e-8
Identity = 33/84 (39.29%), Postives = 53/84 (63.10%), Query Frame = 0
Query:  208 SSPRPIGRKRAKKEKECMADKAKKLKLAAESIELQRERNEALHRHVEIMLFTNAPSGCNESETLEYFQLMRSHALRRVRKLEAS 291
            S+ RP+GR++AK+  +      KK+K+A E+++ Q+ RN AL R  +I+LFTN P G +  +  E+F LM+  AL  +R   A+
Sbjct:  130 STKRPVGRRKAKEIAQKQHSANKKIKIAQEAVKAQQNRNTALSRQKDILLFTNGPGGVHSKQAQEFFSLMQEEALEALRDRAAA 213          
BLAST of Gcaud963.t1 vs. uniprot
Match: A0A1D6F7Q1_MAIZE (Splicing factor U2af large subunit B n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6F7Q1_MAIZE)

HSP 1 Score: 63.9 bits (154), Expect = 1.120e-7
Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = 0
Query:   23 TKKKTTRGSGFTAAEDAAIAKAWITASENAIVGTEQKKDVFYASITRLYNE-KFKPPNREFRSFESVKSRSKAIVKQCVLFSGCHARVLRSKPTGVSRTDIIRLATGLYNGVKMDSTSDDCGKAFKFLSAWEVLHDHEKF 161
            TK K T+   +TAAED  +   W+  S + IV T Q+K   +A I + YNE + + P R  R+  S   + +A V +   FSGC+ARVLR K +G++  D    A  L+        + +  K F F+  W  L    K+
Sbjct:  216 TKPKKTKEQNYTAAEDLLLCTTWLQISSDPIVHTGQRKKGLWARIEKRYNEQRGEYPCRMNRALSSRWDKIRADVGK---FSGCYARVLREKQSGLTDDDKTSKAATLF--------AHEENKPFHFMHCWHKLKGEPKW 344          
BLAST of Gcaud963.t1 vs. uniprot
Match: A0A2K2DBH9_BRADI (NAM-associated domain-containing protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A2K2DBH9_BRADI)

HSP 1 Score: 63.2 bits (152), Expect = 1.300e-7
Identity = 43/146 (29.45%), Postives = 68/146 (46.58%), Query Frame = 0
Query:   24 KKKTTRGSGFTAAEDAAIAKAWITASENAIVGTEQKKDVFYASITRLYNEKFKPPNREFRSFESVKSRSKAIVKQCVLFSGCHARVLRSKPTGVSRTDIIRLATGLYNGVKMDSTSDDCGKAFKFLSAWEVLHDHEKFMAGTSHSS 169
            K    R   FT  ED  +  AW+ AS + IVGTEQK    +  I   Y E  KP   + R+  S+  R  A+ +Q   F GC+ +++  + +G +  D I       + +K+  + D   K F  +  W +L   +K++A    SS
Sbjct:   31 KANNKRKGNFTDKEDEILVAAWLHASMDPIVGTEQKNATCWNRIHEEY-ESHKPEGSD-RNVNSLSHRWSAVKEQVGRFCGCYEQIMHMRESGKTEQDKI------VDALKLFKSQDKTNKGFVLMHCWNMLRFEQKWLAQVDRSS 168          
The following BLAST results are available for this feature:
BLAST of Gcaud963.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A2V3J091_9FLOR7.970e-5039.19Glutathione S-transferase T2 n=1 Tax=Gracilariopsi... [more]
R7QR73_CHOCR9.710e-4938.66Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IMI1_9FLOR3.150e-3849.28Glutathione S-transferase T3 n=1 Tax=Gracilariopsi... [more]
A0A2V3IZU4_9FLOR1.160e-1834.47NAM-associated domain-containing protein n=1 Tax=G... [more]
A0A2V3IR86_9FLOR4.520e-1250.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IDU3_9FLOR4.030e-840.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
UPI001C2598AF5.760e-828.57glutathione S-transferase T3-like n=1 Tax=Salvia s... [more]
A0A2V3ISJ3_9FLOR8.840e-839.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1D6F7Q1_MAIZE1.120e-733.57Splicing factor U2af large subunit B n=1 Tax=Zea m... [more]
A0A2K2DBH9_BRADI1.300e-729.45NAM-associated domain-containing protein n=1 Tax=B... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 215..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 292..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..226
NoneNo IPR availablePANTHERPTHR45023FAMILY NOT NAMEDcoord: 10..244
IPR029466No apical meristem-associated, C-terminal domainPFAMPF14303NAM-associatedcoord: 144..279
e-value: 3.5E-13
score: 50.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_5045_length_1819_cov_4.242477contigNODE_5045_length_1819_cov_4.242477:722..1684 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud963.t1Gcaud963.t1Gracilaria caudata M_176_S67 malemRNANODE_5045_length_1819_cov_4.242477 722..1684 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud963.t1 ID=Gcaud963.t1|Name=Gcaud963.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=321bp
MVDEGAVARQTTNPTTPSTSSDTKKKTTRGSGFTAAEDAAIAKAWITASE
NAIVGTEQKKDVFYASITRLYNEKFKPPNREFRSFESVKSRSKAIVKQCV
LFSGCHARVLRSKPTGVSRTDIIRLATGLYNGVKMDSTSDDCGKAFKFLS
AWEVLHDHEKFMAGTSHSSHISSEDHQVVLEDVSDDANGSESKGSGSRPS
SLKDQKASSPRPIGRKRAKKEKECMADKAKKLKLAAESIELQRERNEALH
RHVEIMLFTNAPSGCNESETLEYFQLMRSHALRRVRKLEASTTNRNENVS
SGVQSSGQDNPHNAREGSTQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029466NAM-associated_C