Gcaud9628.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9628.t1
Unique NameGcaud9628.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length168
Homology
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BLAST of Gcaud9628.t1 vs. uniprot
Match: A0A2V3IMR7_9FLOR (Krueppel-like factor 16 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMR7_9FLOR)

HSP 1 Score: 178 bits (452), Expect = 3.980e-52
Identity = 115/176 (65.34%), Postives = 128/176 (72.73%), Query Frame = 0 
Query:    2 VDLAKLRT--NTKRC--KPPSKKKKVSKHVQPPRVPHAAAETKAAQPASAVH-EQHAEPYNL-PAPCSPLTDAASFFDCSSATDSPIDSQPMLELDDFS---FSLDVRHAEAPPLQMQIGLEDVASIMDDTDQTG-LFSQYGGATCGAFTGLDTRFGPFDLDNLQAFGVNTKIEGL 167
            VDL KL    N++R   KPPSKK+K  K  +P           ++QPAS  H  Q A  +N+ PAP SPLTDAASFFD SSATDSP+DSQ MLELD+FS    SLDVRHA+ P LQMQIGLEDVASIMDD DQ G LFSQYGGATC   T LDTRFGPFDLDNLQAFG+NT +EGL
Sbjct:  190 VDLTKLGNFNNSRRTCSKPPSKKQK--KCGKP-----------SSQPASQQHIVQLAPSHNVFPAPSSPLTDAASFFDYSSATDSPMDSQRMLELDEFSEHVLSLDVRHADGPCLQMQIGLEDVASIMDDADQCGGLFSQYGGATCANLTPLDTRFGPFDLDNLQAFGMNTTVEGL 352
The following BLAST results are available for this feature:
BLAST of Gcaud9628.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMR7_9FLOR3.980e-5265.34Krueppel-like factor 16 n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_432_length_25684_cov_4.561794contigNODE_432_length_25684_cov_4.561794:520..1021 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9628.t1Gcaud9628.t1Gracilaria caudata M_176_S67 malemRNANODE_432_length_25684_cov_4.561794 520..1021 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9628.t1 ID=Gcaud9628.t1|Name=Gcaud9628.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=168bp
XVDLAKLRTNTKRCKPPSKKKKVSKHVQPPRVPHAAAETKAAQPASAVHE
QHAEPYNLPAPCSPLTDAASFFDCSSATDSPIDSQPMLELDDFSFSLDVR
HAEAPPLQMQIGLEDVASIMDDTDQTGLFSQYGGATCGAFTGLDTRFGPF
DLDNLQAFGVNTKIEGL*
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