Gcaud9617.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9617.t1
Unique NameGcaud9617.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length154
Homology
BLAST of Gcaud9617.t1 vs. uniprot
Match: A0A2V3J3Q7_9FLOR (50S ribosomal protein L14 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3Q7_9FLOR)

HSP 1 Score: 241 bits (614), Expect = 1.420e-79
Identity = 127/148 (85.81%), Postives = 138/148 (93.24%), Query Frame = 0
Query:    1 MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTSNDRSVTSKKAKKGEIHRALVIRSKNEPVRRDGGYMRTAETAAVLLNAEGAPLGTRIRGPVSAALDRKRFLKVLSLSRAILFSTLADGTRRSCSSPCVFTRYS 148
            MVQMRTVLRVADNSGAKTVRCINILRR+RQRPSGNVGSELVVSVT+NDRSVT+KKAKKGEIHRALVIRSKNEP+R+DGG+MRT ETAA+LLNA+GAPLGTRIRGPVSAALDRKRFLKVLSLSRA LFSTLA   R + +S  + TRYS
Sbjct:    1 MVQMRTVLRVADNSGAKTVRCINILRRQRQRPSGNVGSELVVSVTANDRSVTNKKAKKGEIHRALVIRSKNEPLRKDGGFMRTGETAAILLNADGAPLGTRIRGPVSAALDRKRFLKVLSLSRATLFSTLACPNRNAGTSYRIRTRYS 148          
BLAST of Gcaud9617.t1 vs. uniprot
Match: R7QR53_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR53_CHOCR)

HSP 1 Score: 212 bits (539), Expect = 7.050e-68
Identity = 109/135 (80.74%), Postives = 125/135 (92.59%), Query Frame = 0
Query:    1 MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTSNDRSVTSKKAKKGEIHRALVIRSKNEPVRRDGGYMRTAETAAVLLNAEG-APLGTRIRGPVSAALDRKRFLKVLSLSRAILFSTLADGT 134
            MVQMRTVLRVADNSGAKTVRCINILRR+RQRPSGNVGSELVVSVT+NDRSV +KK +KGE+HRALV+R+KNEP+RRDGG++RT +TAA+LLNA+G AP+ TRIRGPVSAALDRKR+LKVLSL+R  LFST A  T
Sbjct:    1 MVQMRTVLRVADNSGAKTVRCINILRRRRQRPSGNVGSELVVSVTANDRSVKTKKVRKGEVHRALVVRAKNEPLRRDGGFVRTGDTAAILLNADGTAPVATRIRGPVSAALDRKRYLKVLSLARVSLFSTAAAHT 135          
BLAST of Gcaud9617.t1 vs. uniprot
Match: A0A1X6P343_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P343_PORUM)

HSP 1 Score: 129 bits (324), Expect = 1.430e-35
Identity = 76/135 (56.30%), Postives = 96/135 (71.11%), Query Frame = 0
Query:    1 MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTSNDRSVTSKKAKKGEIHRALVIRSKNEPVRRDGGYMR--TAETAAVLL--NAEGAPLGTRIRGPVSAALDRKRFLKVLSLSRAILFSTLA 131
            MVQ+RTVLRVADNSGA+ VR I +LRR+R RP+   GS L VSV   D +V  KK  KGE+H AL++R+ +E  R DGG++R  +  +AAVLL       PLG+R+RGPVSAAL R   +KVLSL+RA L ST+A
Sbjct:    1 MVQVRTVLRVADNSGAQLVRVIGVLRRRRGRPTATTGSLLSVSVIKTDPAVKVKKVAKGEVHTALLVRTADERPRADGGWVRMPSGGSAAVLLARGTADTPLGSRVRGPVSAALRRDGNVKVLSLARAALMSTVA 135          
BLAST of Gcaud9617.t1 vs. uniprot
Match: A0A5J4Z4W1_PORPP (50S ribosomal protein L14 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4W1_PORPP)

HSP 1 Score: 118 bits (296), Expect = 1.510e-31
Identity = 64/125 (51.20%), Postives = 87/125 (69.60%), Query Frame = 0
Query:    2 VQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTSNDRSVTSKKAKKGEIHRALVIRSKNEPVRRDGGYMRTAETAAVLLNAEGAPLGTRIRGPVSAALDRKRFLKVLSLSRAIL 126
            +QM T LRVADNSGA+ V  I ++R +R+  +G VG E+V S+   D    +KK KKGE+HRA+V+R K E  RRDG  MR ++ AA LL   G P+GTRIRG VS+ LDR +++K++SL R I+
Sbjct:    6 IQMMTRLRVADNSGARVVGVIRVMRVRRR--TGTVGDEVVCSIKEADPG--AKKVKKGEVHRAVVVRGKVEDARRDGSTMRCSDWAAALLGPNGQPIGTRIRGVVSSNLDRSKYMKIMSLCRVII 126          
BLAST of Gcaud9617.t1 vs. uniprot
Match: A0A136PBE7_9BACT (50S ribosomal protein L14 n=4 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A136PBE7_9BACT)

HSP 1 Score: 108 bits (271), Expect = 8.150e-28
Identity = 63/126 (50.00%), Postives = 85/126 (67.46%), Query Frame = 0
Query:    1 MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTSNDRSVTSKKAKKGEIHRALVIRSKNEPVRRDGGYMRTAETAAVLLNAEGAPLGTRIRGPVSAALDRKRFLKVLSLSRAIL 126
            MVQ  T L VADNSGAK VRCI +L    +R +G VG  +VVSV S   ++     KKGE+ +A+++R+K E  R+DG Y+R  E AAVL+NAE  P GTRI GPV+  L  K+F+K++SL+  +L
Sbjct:    1 MVQEETNLVVADNSGAKKVRCIRVLGGSDRRYAG-VGDLIVVSVKS---AIPGGNVKKGEVSKAVIVRTKKETRRKDGSYIRFDENAAVLVNAENEPRGTRIFGPVARELREKQFMKIISLAPEVL 122          
BLAST of Gcaud9617.t1 vs. uniprot
Match: A0A7C4WNM3_9PROT (50S ribosomal protein L14 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7C4WNM3_9PROT)

HSP 1 Score: 108 bits (271), Expect = 8.150e-28
Identity = 57/126 (45.24%), Postives = 88/126 (69.84%), Query Frame = 0
Query:    1 MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTSNDRSVTSKKAKKGEIHRALVIRSKNEPVRRDGGYMRTAETAAVLLNAEGAPLGTRIRGPVSAALDRKRFLKVLSLSRAIL 126
            M+QM+TVL VADNSGAK V C+ +L   R+R + ++G  +VVS+     ++ + K KKG++HRA+++R++ E  R DG Y+R    AAVL+N +G P+GTRI GPV+  L  K F+K++SL+  ++
Sbjct:    1 MIQMQTVLDVADNSGAKKVFCVKVLGGSRRRYA-SLGDVIVVSIRE---ALPASKVKKGDVHRAVIVRTRKEVRRTDGSYIRFDTNAAVLINPQGEPIGTRIFGPVARELRGKNFMKIISLAPEVV 122          
BLAST of Gcaud9617.t1 vs. uniprot
Match: A0A534SF92_9DELT (50S ribosomal protein L14 n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534SF92_9DELT)

HSP 1 Score: 107 bits (268), Expect = 2.320e-27
Identity = 59/126 (46.83%), Postives = 88/126 (69.84%), Query Frame = 0
Query:    1 MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTSNDRSVTSKKAKKGEIHRALVIRSKNEPVRRDGGYMRTAETAAVLLNAEGAPLGTRIRGPVSAALDRKRFLKVLSLSRAIL 126
            MVQ+ T+L VADNSGA+ VRC+ +L   R+R + +VG E+VVS+     ++ + K KKGE+ RA+++R+  E  R DG Y+R    +AVLL+A+  P+GTRI GPV+  L  KRF+K++SL+  +L
Sbjct:    1 MVQVETILDVADNSGARRVRCVRVLGGTRRRYA-SVGDEIVVSIRE---AIPNAKVKKGEVMRAVIVRTAKEIGRPDGSYIRFDTNSAVLLDAQREPVGTRIFGPVARELRAKRFMKIISLAPEVL 122          
BLAST of Gcaud9617.t1 vs. uniprot
Match: A0A7V8YB23_9DELT (50S ribosomal protein L14 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V8YB23_9DELT)

HSP 1 Score: 107 bits (266), Expect = 4.650e-27
Identity = 58/126 (46.03%), Postives = 85/126 (67.46%), Query Frame = 0
Query:    1 MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTSNDRSVTSKKAKKGEIHRALVIRSKNEPVRRDGGYMRTAETAAVLLNAEGAPLGTRIRGPVSAALDRKRFLKVLSLSRAIL 126
            M+QM TVL VADNSGAK V+C+ +L   + R    +G  +VVSV   D S   K  KKG++ RA+++R+K E  R+DG Y+R    +AVL+N E  P+GTRI+GPV+  L  ++F+K++SL+  +L
Sbjct:    1 MIQMETVLEVADNSGAKRVKCVKVLGGSK-RKYATIGDVIVVSV--KDASPNGK-VKKGQVARAVIVRTKKELRRKDGSYIRFDNNSAVLINKENEPIGTRIQGPVARELRARQFMKIISLAPEVL 122          
BLAST of Gcaud9617.t1 vs. uniprot
Match: A0A1L6MY38_9DELT (50S ribosomal protein L14 n=1 Tax=Pajaroellobacter abortibovis TaxID=1882918 RepID=A0A1L6MY38_9DELT)

HSP 1 Score: 106 bits (265), Expect = 6.580e-27
Identity = 59/126 (46.83%), Postives = 86/126 (68.25%), Query Frame = 0
Query:    1 MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTSNDRSVTSKKAKKGEIHRALVIRSKNEPVRRDGGYMRTAETAAVLLNAEGAPLGTRIRGPVSAALDRKRFLKVLSLSRAIL 126
            M+QMRT L VADNSGAK V+CI +L   R+R +G +G  ++V+V     ++   K KKG+I RA+V+R+K++  R DG  +R    +AVL+N EG P+GTRI G V+  L  K+F+K+LSL+  +L
Sbjct:    1 MIQMRTKLEVADNSGAKQVQCIKVLGGSRRRYAG-IGDTIIVAVKE---ALPGTKIKKGDIARAVVVRTKDQVTRPDGSCIRFNRNSAVLINKEGEPIGTRIFGSVARELRSKKFMKILSLAPEVL 122          
BLAST of Gcaud9617.t1 vs. uniprot
Match: I0AI27_IGNAJ (50S ribosomal protein L14 n=13 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=I0AI27_IGNAJ)

HSP 1 Score: 106 bits (264), Expect = 9.320e-27
Identity = 62/126 (49.21%), Postives = 85/126 (67.46%), Query Frame = 0
Query:    1 MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTSNDRSVTSKKAKKGEIHRALVIRSKNEPVRRDGGYMRTAETAAVLLNAEGAPLGTRIRGPVSAALDRKRFLKVLSLSRAIL 126
            M+Q  T L VADNSGAK VRCI +L    +R + +VG  +VVSV S   ++ +   KKGE+ RA+V+R+K E  R+DG Y+R  E AAVL+N +G P GTRI GPV+  L  K+F K++SL+  +L
Sbjct:    1 MIQEETNLVVADNSGAKRVRCIRVLGGSNRRYA-SVGDTIVVSVKS---AIPNGAVKKGEVSRAVVVRTKKEVRRKDGTYIRFDENAAVLINNQGEPRGTRIFGPVARELREKQFTKIVSLAPEVL 122          
The following BLAST results are available for this feature:
BLAST of Gcaud9617.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3Q7_9FLOR1.420e-7985.8150S ribosomal protein L14 n=1 Tax=Gracilariopsis c... [more]
R7QR53_CHOCR7.050e-6880.74Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P343_PORUM1.430e-3556.30Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z4W1_PORPP1.510e-3151.2050S ribosomal protein L14 n=1 Tax=Porphyridium pur... [more]
A0A136PBE7_9BACT8.150e-2850.0050S ribosomal protein L14 n=4 Tax=Bacteroidetes/Ch... [more]
A0A7C4WNM3_9PROT8.150e-2845.2450S ribosomal protein L14 n=1 Tax=Proteobacteria b... [more]
A0A534SF92_9DELT2.320e-2746.8350S ribosomal protein L14 n=2 Tax=Deltaproteobacte... [more]
A0A7V8YB23_9DELT4.650e-2746.0350S ribosomal protein L14 n=1 Tax=Deltaproteobacte... [more]
A0A1L6MY38_9DELT6.580e-2746.8350S ribosomal protein L14 n=1 Tax=Pajaroellobacter... [more]
I0AI27_IGNAJ9.320e-2749.2150S ribosomal protein L14 n=13 Tax=Bacteroidetes/C... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000218Ribosomal protein L14PSMARTSM01374Ribosomal_L14_2coord: 1..126
e-value: 2.4E-39
score: 146.7
IPR000218Ribosomal protein L14PPFAMPF00238Ribosomal_L14coord: 1..125
e-value: 4.1E-34
score: 117.2
IPR000218Ribosomal protein L14PPANTHERPTHR1176150S/60S RIBOSOMAL PROTEIN L14/L23coord: 2..125
IPR000218Ribosomal protein L14PHAMAPMF_01367Ribosomal_L14coord: 1..126
score: 21.496496
IPR036853Ribosomal protein L14 superfamilyGENE3D2.40.150.20Ribosomal protein L14coord: 1..126
e-value: 6.3E-36
score: 125.3
IPR036853Ribosomal protein L14 superfamilySUPERFAMILY50193Ribosomal protein L14coord: 1..125
IPR005745Ribosomal protein L14P, bacterial-typeTIGRFAMTIGR01067TIGR01067coord: 1..125
e-value: 1.2E-33
score: 113.5
NoneNo IPR availablePANTHERPTHR11761:SF1850S RIBOSOMAL PROTEIN HLP, MITOCHONDRIALcoord: 2..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_655_length_20202_cov_4.276913contigNODE_655_length_20202_cov_4.276913:16578..17039 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9617.t1Gcaud9617.t1Gracilaria caudata M_176_S67 malemRNANODE_655_length_20202_cov_4.276913 16578..17039 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9617.t1 ID=Gcaud9617.t1|Name=Gcaud9617.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=154bp
MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTSNDRS
VTSKKAKKGEIHRALVIRSKNEPVRRDGGYMRTAETAAVLLNAEGAPLGT
RIRGPVSAALDRKRFLKVLSLSRAILFSTLADGTRRSCSSPCVFTRYSPN
RNM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000218Ribosomal_L14P
IPR036853Ribosomal_L14_sf
IPR005745Ribosomal_L14P_bac-type