Gcaud9604.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9604.t1
Unique NameGcaud9604.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length356
Homology
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BLAST of Gcaud9604.t1 vs. uniprot
Match: A0A2V3IR44_9FLOR (Calponin-homology (CH) domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR44_9FLOR)

HSP 1 Score: 96.3 bits (238), Expect = 5.910e-18
Identity = 75/259 (28.96%), Postives = 140/259 (54.05%), Query Frame = 0 
Query:    1 LKRLSREEERLATSREALDARSLAIEVLFSVDFDSEEHIVLLQDDSTSESD-SFRMEDEFNLEFDDLDEILHGRKAEDDEIDQKLFELGSDREASFTELNNYVESLRGTMLTVSHVLAEQSYAKHMKGLVLKRERERRISEQERHCLHEMFQKSMWDYKMKLARNEGDQKELDDAIVALHERLKDTGSTVFQLLEAYIDSRLMLVEHAEERETDGLRATLLAHEQTWLEILETEGLIASCEEQQRPE-FEKEYTETSIY 257
            LKRL  E ++L TS  A++ R + +E   S   +     V++ +D+   S+ SF + D    E+  L+ +    K ED+ +   L ++ S  +    E    +++L GT+L+ +  LAE  +A+HMK  + +++ E+   ++E   L + F+K MW   ++  R   +++ LD  I+AL    +   +TVF+LLEA ID+RL+ +++AE++E   L   + + E+    I++ E LI S ++ +  E  +++  E  IY
Sbjct: 1458 LKRLELETDKLETSHRAIETRYITLETPHSNSVEFRRTSVIVDEDNLICSEISFPVCDA-EQEYAKLEHVSCLMKEEDEVLRSDLEDIESTLQKEHQESEVQLKALMGTVLSSACFLAEWKFARHMKERLKRKQEEQAERDEEVRDLDQEFKKRMWTLNLERTRIGEEERRLDSEIMALEVSYQKESNTVFELLEAEIDTRLLTLQNAEDKERMELLLRIESREECGQRIIDVEDLINSYQQLKGEEDHQEDQAEEEIY 1715
The following BLAST results are available for this feature:
BLAST of Gcaud9604.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IR44_9FLOR5.910e-1828.96Calponin-homology (CH) domain-containing protein n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2786_length_4695_cov_6.969157contigNODE_2786_length_4695_cov_6.969157:1501..2568 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9604.t1Gcaud9604.t1Gracilaria caudata M_176_S67 malemRNANODE_2786_length_4695_cov_6.969157 1501..2568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9604.t1 ID=Gcaud9604.t1|Name=Gcaud9604.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=356bp
LKRLSREEERLATSREALDARSLAIEVLFSVDFDSEEHIVLLQDDSTSES
DSFRMEDEFNLEFDDLDEILHGRKAEDDEIDQKLFELGSDREASFTELNN
YVESLRGTMLTVSHVLAEQSYAKHMKGLVLKRERERRISEQERHCLHEMF
QKSMWDYKMKLARNEGDQKELDDAIVALHERLKDTGSTVFQLLEAYIDSR
LMLVEHAEERETDGLRATLLAHEQTWLEILETEGLIASCEEQQRPEFEKE
YTETSIYDFFASVEQESNNSITENTLKSLRRSHSDAIEEFKEQSKPPEIF
SGDRDVLSPEDSTGILNNNKYMSLAKQTLQVRVKLREVWNRIRLRSLWRE
IVLWE*
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