Gcaud9600.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9600.t1
Unique NameGcaud9600.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length256
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud9600.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..165
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..255
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_586_length_21355_cov_4.545758contigNODE_586_length_21355_cov_4.545758:15534..16301 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9600.t1Gcaud9600.t1Gracilaria caudata M_176_S67 malemRNANODE_586_length_21355_cov_4.545758 15534..16301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9600.t1 ID=Gcaud9600.t1|Name=Gcaud9600.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=256bp
MRVKVLRIAQHLTGILVGLRVLFPSNSIEKDEDEENHEQQDGSTFVEGIE
RNEIAEHVQNCGQEVETQTQNGFAQDLALVNFSSATSVLVLSSILDRDEN
CLNTSAAGEGTGCPAATATPDLPGDHGLETAPHANGQEHEQSSECEPGKG
GVASDSHSAPGTPGVMVDEARVDGLCVAMFRHLRTRRCIGEVFTRVGRGQ
DIPNGKHSRIKALIRRGLLFPVKGWQKRVRRVHSTRVRQLACAMGFPLDK
PCHGF*
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