Gcaud9599.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9599.t1
Unique NameGcaud9599.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length516
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud9599.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 366..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 290..311
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 265..283
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 284..515
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 23..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_586_length_21355_cov_4.545758contigNODE_586_length_21355_cov_4.545758:8692..12956 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9599.t1Gcaud9599.t1Gracilaria caudata M_176_S67 malemRNANODE_586_length_21355_cov_4.545758 8692..12956 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9599.t1 ID=Gcaud9599.t1|Name=Gcaud9599.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=516bp
MLPNLLRFVAPIAGFVVVVKILRELNSKLQCDEDEDEHLGEEMERQVKEE
KRNEVHGEVCMSSQASNTQTSDEIVQDHKVVNLSSATSSSGASYSSHRDR
TFVSLSKTSTEEGCVDEQPDYSGLSNCRHGNSPDCEIRCSEDLDEPTDGI
CYSVVTARCEFNETEATAAENEQASTTRSDIELGQQVADESHLVPSNPGV
MVDKAHVDALCVEMFGHLRRRRCIGIVFARAGNEIPDEKHGRIKALVTHG
LLFPIPERSNMWAKVLRIALPLAGILVGLRVLFPSNSVEKDEDEENNEQQ
DGSTVVEGIERDEIAEHVQSCGQEVEMQTQNGFAQDLALVNLSSATSVSA
LSNCLNTSTAGEGTGCPDAIATPHVPGDHGLETAPNANGEEHEQSSECEP
DKGGVASDSHSAPGTPGVMVDEARVDGLCVAMFRHLRTRRCIGEVFARVG
RVQDTPNEKHGRIKTLIRRGLLFPVKGWQKRVRRTHNSRVRQLALAMGVA
LDQAMPWVPQQFERT*
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